Species-specific family expansions


Protein family	ZYRO	KLTH	SAKL	KLLA	ERGO	CDS	Brief description
						Ê	
Z. rouxii
GL3C0055	10	4	3	2	0	ZYRO0A13574g	similar to SACE YGL039W and YGL157W
						ZYRO0B00330g	similar to SACE YGL039W and YGL157W
						ZYRO0B16742g	similar to SACE YGL039W and YGL157W
						ZYRO0C18546g	similar to SACE YGL039W and YGL157W
						ZYRO0E10362g	similar to SACE YGL039W and YGL157W
						ZYRO0F05214g	similar to SACE YOL151W GRE2 NADPH-dependent methylglyoxal reductase (D- lactaldehyde dehydrogenase)
						ZYRO0F18656g	similar to SACE YOL151W GRE2 NADPH-dependent methylglyoxal reductase (D- lactaldehyde dehydrogenase)
						ZYRO0G00242g	similar to SACE YGL039W and YGL157W
						ZYRO0G15400g	similar to SACE YOL151W GRE2 NADPH-dependent methylglyoxal reductase (D- lactaldehyde dehydrogenase)
Ê	Ê	Ê	Ê	Ê	Ê	ZYRO0G22506g	similar to SACE YGL039W and YGL157W
GL3C0080	6	3	2	1	1	ZYRO0C11902g	similar to SACE YHR179W OYE2 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN)
						ZYRO0C11924g	similar to SACE YHR179W OYE2 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN)
						ZYRO0F12144g	similar to SACE YHR179W OYE2 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN)
						ZYRO0F13618g	similar to SACE YHR179W OYE2 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN)
						ZYRO0F16852g	similar to SACE YHR179W OYE2 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN)
Ê	Ê	Ê	Ê	Ê	Ê	ZYRO0G15444g	similar to SACE YHR179W OYE2 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN)
GL3C0186	6	1	0	0	0	ZYRO0A01122g	similar to SACE YOR388C FDH1 NAD( )-dependent formate dehydrogenase
						ZYRO0A08206g	similar to SACE YOR388C FDH1 NAD( )-dependent formate dehydrogenase
						ZYRO0D10780g	similar to SACE YOR388C FDH1 NAD( )-dependent formate dehydrogenase
						ZYRO0F16874g	similar to SACE YNL274C Putative hydroxyisocaproate dehydrogenase
						ZYRO0G18876g	similar to SACE YOR388C FDH1 NAD( )-dependent formate dehydrogenase
Ê	Ê	Ê	Ê	Ê	Ê	ZYRO0G19866g	similar to SACE YOR388C FDH1 NAD( )-dependent formate dehydrogenase
GL3R0232	5	2	2	2	1	ZYRO0B16764g	similar to SACE YDR256C CTA1 Catalase A breaks down hydrogen peroxide in the peroxisomal matrix
						ZYRO0C17820g	similar to SACE YGR088W CTT1 Cytosolic catalase T has a role in protection from oxidative damage by hydrogen peroxide
						ZYRO0E10318g	similar to SACE YDR256C CTA1 Catalase A breaks down hydrogen peroxide in the peroxisomal matrix
						ZYRO0F08426g	similar to SACE YDR256C CTA1 Catalase A breaks down hydrogen peroxide in the peroxisomal matrix
Ê	Ê	Ê	Ê	Ê	Ê	ZYRO0G22462g	similar to SACE YGR088W CTT1 Cytosolic catalase T has a role in protection from oxidative damage by hydrogen peroxide
GL3C0522	4	1	2	1	0	ZYRO0A00286g	similar to SACE YPL088W Putative aryl alcohol dehydrogenase 
						ZYRO0D02816g	similar to SACE YPL088W Putative aryl alcohol dehydrogenase 
						ZYRO0F04840g	similar to SACE YPL088W Putative aryl alcohol dehydrogenase 
Ê	Ê	Ê	Ê	Ê	Ê	ZYRO0G20504g	similar to SACE YPL088W Putative aryl alcohol dehydrogenase 
						Ê	
K. thermotolerans
GL3R0092	3	6	3	3	3	KLTH0C01188g	highly similar to SACE YKL085W MDH1 Mitochondrial malate dehydrogenase 
						KLTH0D00440g	conserved hypothetical protein
						KLTH0E09614g	similar to SACE YDL078C MDH3 Cytoplasmic malate dehydrogenase 
						KLTH0F18854g	similar to SACE YOL126C MDH2 Cytoplasmic malate dehydrogenase 
						KLTH0G19536g	similar to SACE YDL078C MDH3 Cytoplasmic malate dehydrogenase 
Ê	Ê	Ê	Ê	Ê	Ê	KLTH0G19558g	similar to SACE YDL078C MDH3 Cytoplasmic malate dehydrogenase 
						Ê	
S. kluyveri
GL3M4590	4	6	12	5	3	SAKL0A00572g	some similarities withSACE YCR089W FIG2 Cell wall adhesin expressed specifically during mating 
						SAKL0A02200g	some similarities with SACE YHR211W  FLO5 and YAR050W FLO1 Lectin-like proteins involved in flocculation
						SAKL0C09130g	some similarities with SACE YHR211W  FLO5 and YAR050W FLO1 Lectin-like proteins involved in flocculation
						SAKL0D09944g	some similarities with SACE YIR019C MUC1 GPI-anchored cell surface glycoprotein 
						SAKL0E00528g	some similarities with SACE YHR211W  FLO5 and YAR050W FLO1 Lectin-like proteins involved in flocculation
						SAKL0E15378g	some similarities with SACE YHR211W  FLO5 and YAR050W FLO1 Lectin-like proteins involved in flocculation
						SAKL0G19910g	some similarities with SACE YAL063C
						SAKL0H00176g	conserved hypothetical protein
						SAKL0H00286g	conserved hypothetical protein
						SAKL0H21340g	no similarity
						SAKL0H21362g	some similarities with SACE YIR019C MUC1 GPI-anchored cell surface glycoprotein 
Ê	Ê	Ê	Ê	Ê	Ê	SAKL0H23188g	some similarities with SACE YIR019C MUC1 GPI-anchored cell surface glycoprotein 
GL3C0107	2	3	6	3	1	SAKL0D02486g	similar to SACE YDR242W AMD2 Putative amidase
						SAKL0E04994g	conserved hypothetical protein
						SAKL0E15312g	similar to SACE YDR242W AMD2 Putative amidase
						SAKL0H01254g	similar to SACE YMR293C 
						SAKL0H11990g	similar to SACE YDR242W AMD2 Putative amidase
Ê	Ê	Ê	Ê	Ê	Ê	SAKL0H23804g	similar to SACE YDR242W AMD2 Putative amidase
GL3R0543	1	1	5	1	1	SAKL0B12826g	similar to SACE YBR158W AMN1 Involved in daughter cell separation and Chromosome Stability
						SAKL0G00110g	similar to SACE YBR158W AMN1 Involved in daughter cell separation and Chromosome Stability
						SAKL0G00132g	similar to SACE YBR158W AMN1 Involved in daughter cell separation and Chromosome Stability
						SAKL0G19866g	similar to SACE YBR158W AMN1 Involved in daughter cell separation and Chromosome Stability
Ê	Ê	Ê	Ê	Ê	Ê	SAKL0H10824g	similar to SACE YBR158W AMN1 Involved in daughter cell separation and Chromosome Stability
GL3C0086	1	1	4	2	1	SAKL0C03102g	conserved hypothetical protein
						SAKL0C03124g	conserved hypothetical protein
						SAKL0G04004g	similar to SACE YDR402C DIT2 Sporulation-specific enzyme required for spore wall maturation involved in the production of a soluble LL-dityrosine-containing precursor of the spore wall 
Ê	Ê	Ê	Ê	Ê	Ê	SAKL0H11176g	conserved hypothetical protein
						Ê	
K. lactis
GL3C0074	1	4	4	12	0	KLLA0A00132g	similar to SACE YKL221W MCH2 Protein with similarity to mammalian monocarboxylate permeases
						KLLA0B00143g	similar to SACE YKL221W MCH2 Protein with similarity to mammalian monocarboxylate permeases
						KLLA0C00132g	similar to SACE YKL221W MCH2 Protein with similarity to mammalian monocarboxylate permeases
						KLLA0C06677g	similar to SACE YKL221W MCH2 Protein with similarity to mammalian monocarboxylate permeases
						KLLA0C17336g	similar to SACE YKL221W MCH2 Protein with similarity to mammalian monocarboxylate permeases
						KLLA0D00143g	similar to SACE YKL221W MCH2 Protein with similarity to mammalian monocarboxylate permeases
						KLLA0D10131g	similar to SACE YKL221W MCH2 Protein with similarity to mammalian monocarboxylate permeases
						KLLA0D20009g	similar to SACE YKL221W MCH2 Protein with similarity to mammalian monocarboxylate permeases
						KLLA0E00133g	similar to SACE YKL221W MCH2 Protein with similarity to mammalian monocarboxylate permeases
						KLLA0F00154g	similar to SACE YKL221W MCH2 Protein with similarity to mammalian monocarboxylate permeases
						KLLA0F11077g	weakly similar to SACE YNL125C ESBP6 Protein with similarity to monocarboxylate permeases 
Ê	Ê	Ê	Ê	Ê	Ê	KLLA0F24200g	weakly similar to SACE YNL125C ESBP6 Protein with similarity to monocarboxylate permeases 
GL3C0221	2	2	2	7	0	KLLA0A00110g	conserved hypothetical protein
						KLLA0C00110g	conserved hypothetical protein
						KLLA0C06699g	conserved hypothetical protein
						KLLA0D13002g	conserved hypothetical protein
						KLLA0D20031g	conserved hypothetical protein
						KLLA0E00111g	conserved hypothetical protein
Ê	Ê	Ê	Ê	Ê	Ê	KLLA0F00132g	conserved hypothetical protein
GL3C3528	0	2	0	5	0	KLLA0B00308g	some similarities with SACE YAR050W
						KLLA0B14916g	some similarities with SACE YHR211W FLO5 Lectin-like protein involved in flocculation
						KLLA0C19316g	some similarities with SACE YAL063C
						KLLA0D00275g	some similarities with SACE YAL063C
Ê	Ê	Ê	Ê	Ê	Ê	KLLA0E25147g	some similarities with SACE YAL063C
GL3R0383	0	2	2	5	0	KLLA0A00176g	similar to SACE YBR092C PHO3 Constitutively expressed acid phosphatase 
						KLLA0B00286g	similar to SACE YBR092C PHO3 Constitutively expressed acid phosphatase 
						KLLA0C19338g	similar to SACE YBR092C PHO3 Constitutively expressed acid phosphatase 
						KLLA0D00258g	similar to SACE YBR092C PHO3 Constitutively expressed acid phosphatase 
Ê	Ê	Ê	Ê	Ê	Ê	KLLA0E24949g	similar to SACE YBR092C PHO3 Constitutively expressed acid phosphatase 
						Ê	
A. gossypii
GL3M4603	0	0	1	2	6	ERGO0D08272g	Syntenic homolog of SACE YPR015C
						ERGO0D08316g	Syntenic homolog of SACE YPR013C
						ERGO0D16368g	no similarity
						ERGO0E06490g	no similarity
						ERGO0G03696g	no similarity
Ê	Ê	Ê	Ê	Ê	Ê	ERGO0G12518g	no similarity
GL3R0084	1	1	2	1	5	ERGO0B08954g	Syntenic homolog of SACE YJR107W
						ERGO0C02222g	Non-syntenic homolog of SACE YJR107W
						ERGO0E18656g	Non-syntenic homolog of SACE YJR107W; Tandem gene triplication in this genome'
						ERGO0E18678g	Non-syntenic homolog of SACE YJR107W; Tandem gene triplication in this genome'
Ê	Ê	Ê	Ê	Ê	Ê	ERGO0E18700g	Non-syntenic homolog of SACE YJR107W; Tandem gene triplication in this genome'

	The table indicates, for each yeast species, all series of dispersed paralogs of four members of more, that are at least twice more numerous than paralogs of the same family in  other species. Number of genes per species are indicated in columns 2 to 6. Expansions are shadowed, and the corresponding genes are listed in column 7 with their brief description  in column 8.


 



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