HomeZYRO0G22352g
similar to uniprot|P53178 Saccharomyces cerevisiae YGL047W ALG13 Catalytic component of UDP-GlcNAc transferase, required for the second step of dolichyl-linked oligosaccharide synthesis
Element type: CDS
Element length: 603 nucleotides,
on sense strand of
Zyro0G: 1837168..1837770.
Other names:
ZYRO-ORF30
Coding sequence: 201 codons.
Element length: 603 nucleotides,
on sense strand of
Zyro0G: 1837168..1837770.
Other names:
ZYRO-ORF30
Coding sequence: 201 codons.
Homologs and Orthologs
Homologs in protein families: GL3R1263 GL3R1263.F1 GL3R1263.N2Orthologs by synteny: SAKL0H23650g KLTH0D03828g KLLA0A04774g ERGO0G07436g
Protein ZYRO0G22352p 
similar to uniprot|P53178 Saccharomyces cerevisiae YGL047W
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>ZYRO0G22352g.nt AGCAATTCTAACATAGTTCTTTGCACTTCAGAATCACCACCACCTGAGCCTTCCACACGA CTTGAACCGATAGAATCAATTTCATCCATAAAGATAATTGATGGTGCATTTTCTCTTGCC ATAACGAATAATTCACGAACCATACGTGAACCTTCACCAATGTATTTTTGTACTAATTCT GCACCACTGACTCTGATAAATTTACAATCGGTATGATGTGCGACTGCTCTTGCCAAAAGG GTCTTACCAGTACCTGGTGGGCCATAAAGAATTACACCCTTAGGTTGTGTAATACCCAAG CTTTCAAACAACTCTGGATGTTTCACAGGCAACTCAATGACTTCTTTAATTTCTTTAATC TGTTTAGTTAACCCACCGAGCATATCATAAGTTGAATCAGGTACCTTTTCCACCATCATT AATGAAACCAGAGGATCTGCCTTATTTTCTAAAATTTTGTGTAAAGTATAAGAATCACTC TTCAGACATACCCTTTGTGATGGTTTCAAATCCTTTATATTAATATCTTTTGAGATGTCC ACAATGTATTTACCCTCTGGTTGAACTTTAACCAAAACTTTCTTATCACTGACAACTTTT ATCACTTCTCCCACGTAGGAGCCTGGTTCTTGCAATAGACGTAATTCATCCTTAATGAAA CGTACTTTATCATTCAGAGCATTCCTCTGAGCTTCCAAACGACGTAAATTCTCAGTCTTT GCCCGTATGTTTATTTCAGTTTCCTGAATCTTTTGCTCAAAATAGGGCTTTATACCACTT TCATAAGTGTTCATAGACACATTGGAATTCTTAACAACGGCTGCCATGCTTAACCAGGAC CTTTTATGCTTTCCATTAAGTAGTGATCAACCATTTAACTTACAGGTTTGCCACCCTTTT AAGATTTCAACATGGATTCTGAAATCACGATATACGTCGAATTTTCTATACTATTTAACT GTATAAACCCTTCAATATTGGTGAATAAAATACCCTAAGAATGCCTATAAAGACCATTTT CGTCACCTGTGGTGCTACTGTCCCATTTCCTCAATTGGTAGAGGCTGTACTGTCTCCCAG AATCGTTGAAGAATTGCTAAATCTTGGATTTAAGAGGATCATTGTACAGTTTGGTAGAAA TTACCGAGAATCATTTACCCAGTCAATAAACGTTGACCAATCATTACCACCATCGCAAAC ATATTTGGGGTTTAATGGCGATCCCGTCCACGGTTTTTCCCAAGGTTCTTCAGGGAAACT GGAAATCATAGGATTCGAATACTCTACGAGAATTCAAGATGTAATTCAAGAGAATGCTGA TTTGGTCATCTCTCATGCTGGTACTGGATCTATCTTAGATTCATTGAGATTGGGAAAACC CTTGATAGTCTGTGTCAATGACACGTTGATGGATAATCATCAACAAGAAATTGCTGATCA ATTTGCATCATCAAACCACCTATGGGCATGTTTACCGAGAGTAGACGACGTCGTCCAATG TCTCAGAAGATCACAAACTGAAAGAACAGAACCGTTTCCATCTGCATACAACAGAAATTT TGAAAAAGCATTGGAAGATTTAGCGTACGGAACATCTAACTAATATCTTTGAACAGAAAA GAAAGGCGGTTAGTCTATATTACTATAAAAAAAAAATATGCCCAGCATAGATCCTACAAA CTTCTTTAACTGCATGTATGTGATGCGTTTCAATCCAGTGAAATAACTTCAATTTTGCGA ACTTGATCCTCTGGTTCGACAGCTGCTAATTTTGGGATATTCAAATGCAGAATACCGTTC AAATATTTGGCTCTGATATTATCAGCATCCACACCCGGCTTCTCTGGAAACAAGATTTCC CGCTTAAATCTGCCAGAAGCACTCTCTTGAATTCTAATTTTGC
>ZYRO0G22352g.cds ATGCCTATAAAGACCATTTTCGTCACCTGTGGTGCTACTGTCCCATTTCCTCAATTGGTA GAGGCTGTACTGTCTCCCAGAATCGTTGAAGAATTGCTAAATCTTGGATTTAAGAGGATC ATTGTACAGTTTGGTAGAAATTACCGAGAATCATTTACCCAGTCAATAAACGTTGACCAA TCATTACCACCATCGCAAACATATTTGGGGTTTAATGGCGATCCCGTCCACGGTTTTTCC CAAGGTTCTTCAGGGAAACTGGAAATCATAGGATTCGAATACTCTACGAGAATTCAAGAT GTAATTCAAGAGAATGCTGATTTGGTCATCTCTCATGCTGGTACTGGATCTATCTTAGAT TCATTGAGATTGGGAAAACCCTTGATAGTCTGTGTCAATGACACGTTGATGGATAATCAT CAACAAGAAATTGCTGATCAATTTGCATCATCAAACCACCTATGGGCATGTTTACCGAGA GTAGACGACGTCGTCCAATGTCTCAGAAGATCACAAACTGAAAGAACAGAACCGTTTCCA TCTGCATACAACAGAAATTTTGAAAAAGCATTGGAAGATTTAGCGTACGGAACATCTAAC TAA
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/ZYRO/ZYRO0G22352p