HomeZYRO0E03828g
highly similar to uniprot|P32775 Saccharomyces cerevisiae YEL011W GLC3 Glycogen branching enzyme, involved in glycogen accumulation
Element type: CDS
Element length: 2121 nucleotides,
on sense strand of
Zyro0E: 289636..291756.
Other names:
ZYRO-ORF4002
Coding sequence: 707 codons.
Element length: 2121 nucleotides,
on sense strand of
Zyro0E: 289636..291756.
Other names:
ZYRO-ORF4002
Coding sequence: 707 codons.
Homologs and Orthologs
Homologs in protein families: GL3R2291 GL3R2291.F1 GL3R2291.N1Orthologs by synteny: SAKL0D10538g KLTH0H13794g KLLA0A11176g ERGO0E07282g
Protein ZYRO0E03828p 
highly similar to uniprot|P32775 Saccharomyces cerevisiae YEL011W GLC3 Glycogen branching enzyme involved in glycogen accumulation green fluorescent protein (GFP)- fusion protein localizes to the cytoplasm in a punctate pattern
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>ZYRO0E03828g.nt GTTAATGATAATATGCAAGAATTCCATGTTAAATTTCATGGACCCAAAGATACACCGTAC GAGACTGGTGTTTGGAGACTTCATGTGGAACTGCCGGACAACTACCCTTACAAGTCACCA AGTATTGGTTTCGTCAACAAGATTTTCCATCCCAACATTGATATTGCATCGGGATCAATC TGTTTAGATGTTATTAATTCGACATGGTCGCCCCTCTACGATTTGAAAAACATTGTCGAA TGGATGATACCAGGACTGTTAAAGGAACCCAACGGTAGTGATCCACTGAACAACGAAGCC GCAACATTACAGTTAAGAGATAAGAAATTGTACGAGGAGAAAATTAAGGAGTACATCGAC AAATACGCCTGTGCAGAAAAATACGAGCAGTTGTTCGGTACAGACGACGAAGACGACGAT GAAGATGACGATGAAGACGACGAGCAAGAGAACGATGAAGATGACGACGAAGATGTCGAT GGTAATGGAGATGAAGAAGTCGACGGTGGAAGTGAAGAGTTAAGCGACATAGAGGTTAGT GACGAGGAATGAGCTCGTTCTTTTCTTCTCGGGTTAGATGTCTTGGTAAAAGAGAATAAT CCATATATATATATACTATGTACTGTATACCGTACTGTGAGAGTAAAAGCATGACACGTG AATGAGGACGTGAAACGTATATGAAACGTTTCGCTTCTGGAACAGTCGTTTCACAAATTG TTTCAGATTGAGACAATTGAAGTACTTTTATACGGTTGAGGGGGTGGGGGGAAAGATTTA CGGATTTATTTTTGTCAGCGGGTACCTCAAAAAGAAAAAAGGGGAGAGTTTTCAAGGGTT AAACTTTCTACTGCCGTTGTTGTCGTTACCTGGCGACTGTTACAGCGGGTATATAAAGAG GGCAAGATTATCAGGTGGCGCCAGCAGAGACAATGGTGGGATTCTTTACTTTTTATCTTC TTCACATTCCAGTAAATACAAGAATCTTCGAGCTCGAGTAATGGGTGCTGATTCGGAAAT TCCAGAAAACGTCAGAGGCGTCGTTGAATTTGATAGCTGGTTGAAACCATTCGTTCATGT TTTGTCAGAAAGAAGATATTTAGGTGATAAATGGCATTATGATATTACTCATGCTACCCC TGATGGGTCTTATCAGTCGTTGTCAAAGTTCGCTAGGGATTCGTACAGATCATACGGATT GCATGCGGATTGGGAGACTGGAGAGATAAGATATAGAGAATGGGCGCCTAATGCTCAGAA AGCGTTTCTCATTGGTGAATTCAACAATTGGAATGAGAGTTCTCATGAATTGAAATCCAA GGATGAGTTTGGTGTGTTCCACATCACTATACCACCTAATGCGGATGGGTCGTTTGCCAT TCCGCACGATTCTAAAATAAAAGTTATGTTTGTTAAACCTGATGGTTCCAAGATTTACAG ATTGCCAGCCTGGATTACAAGAGCCACACAGCCTGATCGTGAGACTGCGAAGGCGTATGG CCCTGGATATGAGGCAAGATTTTGGAATCCTGAAAAACCGTATGAGTTTAAGAATAAGAG ACCTCATTTCAACCAAAAAGTGGACTCGTTAAGAATTTATGAAGCGCATGTTGGAATTTC ATCACCGGAACCAAAGGTAGCCTCTTACAAAGAATTCACTCAAAATGTTTTACCAAGGAT TAAACATCTGGGGTACGATGCCATTCAATTGATGGCTATAATGGAGCATGCTTATTACGC AAGTTTTGGCTACCAGGTGACCAATTTTTTCGCTGCAAGTTCCCGTTATGGTACTCCCGA GGAATTGAAAGAATTGATAGATACCGCCCACGGTATGGGAATTCTCGTGCTGTTAGATGT GGTACACAGTCATGCTTCCAAGAATGCAGAGGATGGACTCAACGAATTTGATGGTTCCGA TCACCAGTACTTTCATTCTATAGATTCTGGTAGAGGTAGTCATCCAGACTGGGACTCGAG ATTGTTTAACTACGGAAGTTTTGAGGTGCAAAGATTCTTGTTAGCCAATTTAGCTTTTTA CATCGACGTCTATCAGTTTGATGGTTTCAGATTCGACGGTGTCACTTCTATGCTTTATCT GCACCATGGTGTGGGGCCCAGTGGGGCATTTAGTGGTAATTACAACGAGTACTTATCGAA GGAAAAGTCGGGTGTTGACCATGAAGCTGTTGCATATCTGATGTTAGCAAACGATCTGGT CCATGAATTACTACCGCAATCTGCTATTACCATTGCTGAAGATGTTTCTGGTTACCCCAC ATTGTGTCTACCAAGAGCAATGGGAGGTATCGGGTTTGATTACAGATTGGCTATGGCGCT ACCAGATATGTGGATTAAACTCTTGAAAGAGCAAAAAGATGAAGATTGGGAAATGGGGGA CATTGTTCACACTTTAACCAATAGACGTCATGGTGAAAAAGTGGTTGCTTATTGTGAATC ACACGATCAAGCATTGGTCGGTGATAAAACTCTAGCATTTTGGCTTATGGATGCTGCTAT GTACACAGACATGTCGGTCTTGAAACCTGCAACTTTGGTAATCGATCGTGGTATGTCTTT ACACAAAATGATCAGATTGTTGACGCATTCTCTAGGTGGTGAAGCATTTTTAGCATTCGA AGGTAATGAATTTGGCCATCCTGAGTGGTTAGATTTCCCCAATGTTAATAATGGTGACAG TTTCCATTATGCTCGTAGACAATTCAATTTAGCAGACGACAACTTGTTACGTTACAGAAT GTTGTATGAATTCGATGCCGCTATGCAAAACTGTGAAAGAAAACACCAGTGGCTAAATAC ACCGCAGGCATACGTCTCTTTAAAACATGAAGGTGATAAGGTAATTGCGTTTGAGCGTAA TGGACATTTGTTCATGTTTAATTTCCATCCTACTAAAAGTTATACTGATTACAGATTTGG TGTGGATGTTGCGGGTACTTATAAAATTGTTTTGAATTCCGATCGTAAAGAATATGGCGG TTACGATAGAGTTGATGAAAGTGCAAGATTTTTCACCACTGATTTAGCATGGAATGGTAG AAAAAACTTTATTCAAGTTTATATCCCATCCAGGGTAGCACTGGTTTGCGCCCTTGAGTA ATATATCAATATCATATTGAGACGTTTTTAGATTAGTGATAGTAGCGATAATAATAATAT TAATAATAATAATAATAATTGTTGTTTTGTTTTTTTTTCTTTTCTTTTGGCTCTTCGAAC TTTTTGATCGGATCTCTATTCCCAAATGATCAGTATACCTCGATCTATCTGCAATTAGAT TCTAATATGCTTACGAGCTTGGCAGAGCACACAACATGGGGACTTGTTAGCGCCGTATGT GTTGGGTGTGTGGGTGTAATGGATTCAGTTGCTCATGCCCCAGTGAATGGAAAAACTCTT A
>ZYRO0E03828g.cds ATGGGTGCTGATTCGGAAATTCCAGAAAACGTCAGAGGCGTCGTTGAATTTGATAGCTGG TTGAAACCATTCGTTCATGTTTTGTCAGAAAGAAGATATTTAGGTGATAAATGGCATTAT GATATTACTCATGCTACCCCTGATGGGTCTTATCAGTCGTTGTCAAAGTTCGCTAGGGAT TCGTACAGATCATACGGATTGCATGCGGATTGGGAGACTGGAGAGATAAGATATAGAGAA TGGGCGCCTAATGCTCAGAAAGCGTTTCTCATTGGTGAATTCAACAATTGGAATGAGAGT TCTCATGAATTGAAATCCAAGGATGAGTTTGGTGTGTTCCACATCACTATACCACCTAAT GCGGATGGGTCGTTTGCCATTCCGCACGATTCTAAAATAAAAGTTATGTTTGTTAAACCT GATGGTTCCAAGATTTACAGATTGCCAGCCTGGATTACAAGAGCCACACAGCCTGATCGT GAGACTGCGAAGGCGTATGGCCCTGGATATGAGGCAAGATTTTGGAATCCTGAAAAACCG TATGAGTTTAAGAATAAGAGACCTCATTTCAACCAAAAAGTGGACTCGTTAAGAATTTAT GAAGCGCATGTTGGAATTTCATCACCGGAACCAAAGGTAGCCTCTTACAAAGAATTCACT CAAAATGTTTTACCAAGGATTAAACATCTGGGGTACGATGCCATTCAATTGATGGCTATA ATGGAGCATGCTTATTACGCAAGTTTTGGCTACCAGGTGACCAATTTTTTCGCTGCAAGT TCCCGTTATGGTACTCCCGAGGAATTGAAAGAATTGATAGATACCGCCCACGGTATGGGA ATTCTCGTGCTGTTAGATGTGGTACACAGTCATGCTTCCAAGAATGCAGAGGATGGACTC AACGAATTTGATGGTTCCGATCACCAGTACTTTCATTCTATAGATTCTGGTAGAGGTAGT CATCCAGACTGGGACTCGAGATTGTTTAACTACGGAAGTTTTGAGGTGCAAAGATTCTTG TTAGCCAATTTAGCTTTTTACATCGACGTCTATCAGTTTGATGGTTTCAGATTCGACGGT GTCACTTCTATGCTTTATCTGCACCATGGTGTGGGGCCCAGTGGGGCATTTAGTGGTAAT TACAACGAGTACTTATCGAAGGAAAAGTCGGGTGTTGACCATGAAGCTGTTGCATATCTG ATGTTAGCAAACGATCTGGTCCATGAATTACTACCGCAATCTGCTATTACCATTGCTGAA GATGTTTCTGGTTACCCCACATTGTGTCTACCAAGAGCAATGGGAGGTATCGGGTTTGAT TACAGATTGGCTATGGCGCTACCAGATATGTGGATTAAACTCTTGAAAGAGCAAAAAGAT GAAGATTGGGAAATGGGGGACATTGTTCACACTTTAACCAATAGACGTCATGGTGAAAAA GTGGTTGCTTATTGTGAATCACACGATCAAGCATTGGTCGGTGATAAAACTCTAGCATTT TGGCTTATGGATGCTGCTATGTACACAGACATGTCGGTCTTGAAACCTGCAACTTTGGTA ATCGATCGTGGTATGTCTTTACACAAAATGATCAGATTGTTGACGCATTCTCTAGGTGGT GAAGCATTTTTAGCATTCGAAGGTAATGAATTTGGCCATCCTGAGTGGTTAGATTTCCCC AATGTTAATAATGGTGACAGTTTCCATTATGCTCGTAGACAATTCAATTTAGCAGACGAC AACTTGTTACGTTACAGAATGTTGTATGAATTCGATGCCGCTATGCAAAACTGTGAAAGA AAACACCAGTGGCTAAATACACCGCAGGCATACGTCTCTTTAAAACATGAAGGTGATAAG GTAATTGCGTTTGAGCGTAATGGACATTTGTTCATGTTTAATTTCCATCCTACTAAAAGT TATACTGATTACAGATTTGGTGTGGATGTTGCGGGTACTTATAAAATTGTTTTGAATTCC GATCGTAAAGAATATGGCGGTTACGATAGAGTTGATGAAAGTGCAAGATTTTTCACCACT GATTTAGCATGGAATGGTAGAAAAAACTTTATTCAAGTTTATATCCCATCCAGGGTAGCA CTGGTTTGCGCCCTTGAGTAA
>ZYRO0E03828g.aa MGADSEIPENVRGVVEFDSWLKPFVHVLSERRYLGDKWHYDITHATPDGSYQSLSKFARD SYRSYGLHADWETGEIRYREWAPNAQKAFLIGEFNNWNESSHELKSKDEFGVFHITIPPN ADGSFAIPHDSKIKVMFVKPDGSKIYRLPAWITRATQPDRETAKAYGPGYEARFWNPEKP YEFKNKRPHFNQKVDSLRIYEAHVGISSPEPKVASYKEFTQNVLPRIKHLGYDAIQLMAI MEHAYYASFGYQVTNFFAASSRYGTPEELKELIDTAHGMGILVLLDVVHSHASKNAEDGL NEFDGSDHQYFHSIDSGRGSHPDWDSRLFNYGSFEVQRFLLANLAFYIDVYQFDGFRFDG VTSMLYLHHGVGPSGAFSGNYNEYLSKEKSGVDHEAVAYLMLANDLVHELLPQSAITIAE DVSGYPTLCLPRAMGGIGFDYRLAMALPDMWIKLLKEQKDEDWEMGDIVHTLTNRRHGEK VVAYCESHDQALVGDKTLAFWLMDAAMYTDMSVLKPATLVIDRGMSLHKMIRLLTHSLGG EAFLAFEGNEFGHPEWLDFPNVNNGDSFHYARRQFNLADDNLLRYRMLYEFDAAMQNCER KHQWLNTPQAYVSLKHEGDKVIAFERNGHLFMFNFHPTKSYTDYRFGVDVAGTYKIVLNS DRKEYGGYDRVDESARFFTTDLAWNGRKNFIQVYIPSRVALVCALE*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/ZYRO/ZYRO0E03828g