HomeZYRO0D06952g
similar to uniprot|P22146 Saccharomyces cerevisiae YMR307W GAS1 Beta-1,3-glucanosyltransferase, required for cell wall assembly
Element type: CDS
Element length: 1680 nucleotides,
on anti-sense strand of
Zyro0D: complement(595856..597535).
Other names:
ZYRO-ORF5166
Coding sequence: 560 codons.
Element length: 1680 nucleotides,
on anti-sense strand of
Zyro0D: complement(595856..597535).
Other names:
ZYRO-ORF5166
Coding sequence: 560 codons.
Homologs and Orthologs
Homologs in protein families: GL3R0042.F1 GL3R0042.N2 GL3R0042Orthologs: strict determination not possible; homologs must be refined manually
Protein ZYRO0D06952p 
similar to uniprot|P22146 Saccharomyces cerevisiae YMR307W GAS1 Beta-1.3-glucanosyltransferase required for cell wall assembly localizes to the cell surface via a glycosylphosphatidylinositol (GPI) anchor
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>ZYRO0D06952g.nt TTTACTCTATTTGCAAACACCATTACTTTTCGTACCATTCATCGAGTACTGGCATCCAAT GCTTCTATTCTGGTTGAAACCCACAAGCATTATCACTTCCAAAATCATCTATACTAGGAA GCAGAAAAGACGCCGGAACAATATCTTGAGGAAATATTTTCTACTTTATTTCCTGATCTT GGGCATATTGCTGGTCTTACTGATTTCCCCATTTTTCGCGCATAAGATAATCCCTGCTCC AAGCAAGTTTTTCCCATCGTCATCTCCAATAGCTGGAGTGGCACAGCCTAATAGCCAAAA TAATAATGATACTGGTCCAAATGCGCCTGGAACCATATTGACTACTACGCCACCAATGCC TCAATTTAGAACTGTTCCATGAGAAAAGAAAAAGAAAAAAAAAAAACAAAAAAAAAACGA ATTACCTTACGTACACTAAGATTTCGATTTCCCTACGATTGCTGGTTCATCGCAGTGGTA ATTTTTGCCCGAACAGATTGATTTCCCTTTTATTTTCTTCGAGGCAATACGTAAGGTGAA TTAAAAAAGAGAGTGATCTACGCCTGGCGCCGCACGCGTTTGTTTTGTCTGTGACACTTG AACGCGACACGGAACGTTCAACTGCTTTTTTTGGAAGAGCGGAACTACTACAAGATCTTC TAAGCTGAGTTTTGTAATAAATCCAAAAAAAATTTGGCGGTTTAGTATGAATGAAGAAAA GCTCGTATCATGAAACTAAATAATTAACCACTACTGGCAGAAGAATACGCGCACTGAGGT AAATGAATGGTAGAGTTGTGTTATGTTTGGTTTTTTGCGTTGTTGTTGATATCAAAACTT GGCAAACAAAGAGAAAAAACATTTATATATGACCAGAGAAACCTGAAATCGTCTTGAAAG CTTCTTTCTCTCATCTTCTCACATTTGTATTTGTTACATTTTAGTTTAATTTCGAAAACA ACAACTAGTTTTAAAAGAAGTACCGTAATAACGAACACAGATGTTGTTGAAGAATTTATC TTCCCTAACATTAGGTGCTCTATACGCTGCATCTGGTGCCTTTGCAGACAGCTCGAGCAG CAGTAGTTCATTGCCACCAATTGAAGTTGCTGGTAACAAGTTCTTCTACTCCAATAACGG TTCCCAATTCTATATCCAAGGTATTGCTTACCAAGCTGATACTGTTAACGGTAGTGCAGG TGATGATATTAACGACCCATTGGCCGATTACTCTACATGCTCCAGAGATATCCCATACTT GAAGAAATTGAACACTAACGTTGTTCGTGTTTACGCTGTTAACACCACTCTAGATCACAG TAAATGTATGGAAGCTCTAGCTGAAAACGATATCTATGTGATTGCTGATTTGTCTATTCC AGGTAAATCTGTTGACAGAACCGACCCACAATGGAATGTCGAACTTTACGAACGTTACAC TGGTGTTGTTGATGCTTTTGCTAACTACACTAACGTTCTTGGTTTCTTTGCTGGTAACGA AGTTACTAACAACGCTTCCAACACTGATGCTTCCGCCTTCGTTAAGGCTGCTGTTAGAGA CGTCAAGAAGTACATTAGTGACAAGGACTACAGAAAGATTCCTGTCGGTTACTCATCTAA CGATGATGAAGACACCAGAGTTCCTATGGCTGATTATTTCGCTTGCGGTGACAGCGATGT TAAAGCTGATTTCTACGGTATTAACATGTACGAATGGTGTGGTGACTCTAACTTCCAAAC TTCTGGTTACAAGGATAGAACTGCTGATTTCAAAAACTTGTCCATCCCAATTTTCTTCTC TGAATACGGTTGTAACGCTGTGAAACCAAGAAAGTTCAGTGAAGTGCAAACATTGTACGG TAGCAACATGACTGACGTCTGGTCTGGTGGTATTGTTTACATGTACTTCGAAGAAGATAA CGGATATGGTTTGGTTTCAGTTGAAAACAACAATGTCAAGACTTTGTCTGATTTCGAAAA CTTGTCTAGCCAAATGGCCAAGATAAAGCCATCTGTTGCTAAGAACTCTTCTTACACTGC TCAGAGTACTTCTTTGTCCTGTCCAGCATCTCAGAAATACTGGAAGGCTAACACCAAATT GCCACCAACTCCAAGCAAGGACTTGTGTGGTTGTATGCACGATTCTTTGTCCTGTGTGGT CAACACTGACAAGATCGATGAAGATAAATACGGTGACTTGTTCGGTTACGTTTGCTCTCA AGTTGACTGTGATGGTATTACCGCTGATGGTAAGAATGGTTCTTACGGTACCTACTCCTT CTGTTCCGCTGAAGAACAATTGTCATTTGTTTTGAACTTGTACTACCAAAAGAACGGTAA GCAAAGTTCTGCCTGTGACTTCAAGGGTTCCGCTTCTTTGCAAAAGGCAACCACTCAATC TGCTTGTTCATCTGCTTTGAAGCAAATTGGTTCTTCTGGTACTGGTAGCGCTTCTTCAAG TGTTTCTGTTTCTAGTTCTGGCTCTGGATCTGGCTCAAACTCCAAGTCTAGCTCTAACGG CGACTCTTCTAGCTCCAGCAGCTCTAGCAAGGGCTCTAGCACCGCTGGCGCTAAGGAAAA GAACTTGGCTCTAGGTTCTAAGGCCTCTTTGTCCCAAGTGATTCTATCTTTTGTGGCCAC TTTAGGTGTGGTCGCCGGTGCCGGTTTCGCCATGGCTTAAGCGTAGAGAAAAGAGGTTTT CTCATTCTATTGAACAATAATTTTAATGTAATTCGTTATTCATCGTACTGTATTTTTCGG TAAAAATATATATAAAAGTGCTTTCATTATTTTTTATTAGCCATTTAGAATGAAATAAAC GGTGTAATGTGGTTTTCAACAGATATATTTTTTTAACTACTATACAGTTTATCAAGTCTA TATTTCAGTTTATTGTTGCGTAACCATGAATATCTCATTTAATGCCTTTGGATCCATTGT AGCAGCCTTCTTCTGCCTTATGTATCTTGATCTTGCTGAT
>ZYRO0D06952g.cds ATGTTGTTGAAGAATTTATCTTCCCTAACATTAGGTGCTCTATACGCTGCATCTGGTGCC TTTGCAGACAGCTCGAGCAGCAGTAGTTCATTGCCACCAATTGAAGTTGCTGGTAACAAG TTCTTCTACTCCAATAACGGTTCCCAATTCTATATCCAAGGTATTGCTTACCAAGCTGAT ACTGTTAACGGTAGTGCAGGTGATGATATTAACGACCCATTGGCCGATTACTCTACATGC TCCAGAGATATCCCATACTTGAAGAAATTGAACACTAACGTTGTTCGTGTTTACGCTGTT AACACCACTCTAGATCACAGTAAATGTATGGAAGCTCTAGCTGAAAACGATATCTATGTG ATTGCTGATTTGTCTATTCCAGGTAAATCTGTTGACAGAACCGACCCACAATGGAATGTC GAACTTTACGAACGTTACACTGGTGTTGTTGATGCTTTTGCTAACTACACTAACGTTCTT GGTTTCTTTGCTGGTAACGAAGTTACTAACAACGCTTCCAACACTGATGCTTCCGCCTTC GTTAAGGCTGCTGTTAGAGACGTCAAGAAGTACATTAGTGACAAGGACTACAGAAAGATT CCTGTCGGTTACTCATCTAACGATGATGAAGACACCAGAGTTCCTATGGCTGATTATTTC GCTTGCGGTGACAGCGATGTTAAAGCTGATTTCTACGGTATTAACATGTACGAATGGTGT GGTGACTCTAACTTCCAAACTTCTGGTTACAAGGATAGAACTGCTGATTTCAAAAACTTG TCCATCCCAATTTTCTTCTCTGAATACGGTTGTAACGCTGTGAAACCAAGAAAGTTCAGT GAAGTGCAAACATTGTACGGTAGCAACATGACTGACGTCTGGTCTGGTGGTATTGTTTAC ATGTACTTCGAAGAAGATAACGGATATGGTTTGGTTTCAGTTGAAAACAACAATGTCAAG ACTTTGTCTGATTTCGAAAACTTGTCTAGCCAAATGGCCAAGATAAAGCCATCTGTTGCT AAGAACTCTTCTTACACTGCTCAGAGTACTTCTTTGTCCTGTCCAGCATCTCAGAAATAC TGGAAGGCTAACACCAAATTGCCACCAACTCCAAGCAAGGACTTGTGTGGTTGTATGCAC GATTCTTTGTCCTGTGTGGTCAACACTGACAAGATCGATGAAGATAAATACGGTGACTTG TTCGGTTACGTTTGCTCTCAAGTTGACTGTGATGGTATTACCGCTGATGGTAAGAATGGT TCTTACGGTACCTACTCCTTCTGTTCCGCTGAAGAACAATTGTCATTTGTTTTGAACTTG TACTACCAAAAGAACGGTAAGCAAAGTTCTGCCTGTGACTTCAAGGGTTCCGCTTCTTTG CAAAAGGCAACCACTCAATCTGCTTGTTCATCTGCTTTGAAGCAAATTGGTTCTTCTGGT ACTGGTAGCGCTTCTTCAAGTGTTTCTGTTTCTAGTTCTGGCTCTGGATCTGGCTCAAAC TCCAAGTCTAGCTCTAACGGCGACTCTTCTAGCTCCAGCAGCTCTAGCAAGGGCTCTAGC ACCGCTGGCGCTAAGGAAAAGAACTTGGCTCTAGGTTCTAAGGCCTCTTTGTCCCAAGTG ATTCTATCTTTTGTGGCCACTTTAGGTGTGGTCGCCGGTGCCGGTTTCGCCATGGCTTAA
>ZYRO0D06952g.aa MLLKNLSSLTLGALYAASGAFADSSSSSSSLPPIEVAGNKFFYSNNGSQFYIQGIAYQAD TVNGSAGDDINDPLADYSTCSRDIPYLKKLNTNVVRVYAVNTTLDHSKCMEALAENDIYV IADLSIPGKSVDRTDPQWNVELYERYTGVVDAFANYTNVLGFFAGNEVTNNASNTDASAF VKAAVRDVKKYISDKDYRKIPVGYSSNDDEDTRVPMADYFACGDSDVKADFYGINMYEWC GDSNFQTSGYKDRTADFKNLSIPIFFSEYGCNAVKPRKFSEVQTLYGSNMTDVWSGGIVY MYFEEDNGYGLVSVENNNVKTLSDFENLSSQMAKIKPSVAKNSSYTAQSTSLSCPASQKY WKANTKLPPTPSKDLCGCMHDSLSCVVNTDKIDEDKYGDLFGYVCSQVDCDGITADGKNG SYGTYSFCSAEEQLSFVLNLYYQKNGKQSSACDFKGSASLQKATTQSACSSALKQIGSSG TGSASSSVSVSSSGSGSGSNSKSSSNGDSSSSSSSSKGSSTAGAKEKNLALGSKASLSQV ILSFVATLGVVAGAGFAMA*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/ZYRO/ZYRO0D06952p