HomeZYRO0A12540g
similar to uniprot|Q06135 Saccharomyces cerevisiae YLR343W GAS2 Putative 1,3-beta-glucanosyltransferase has similarity to Gas1p
Element type: CDS
Element length: 1701 nucleotides,
on sense strand of
Zyro0A: 998900..1000600.
Other names:
ZYRO-ORF8637
Coding sequence: 567 codons.
Element length: 1701 nucleotides,
on sense strand of
Zyro0A: 998900..1000600.
Other names:
ZYRO-ORF8637
Coding sequence: 567 codons.
Database cross references:
EMBL: CU928173
GeneID: 8201814
GenomeReviews: CU928173_GR
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CU928173
GeneID: 8201814
GenomeReviews: CU928173_GR
Homologs and Orthologs
Homologs in protein family: GL3R0042Orthologs: strict determination not possible; homologs must be refined manually
Protein ZYRO0A12540p 
similar to uniprot|Q06135 Saccharomyces cerevisiae YLR343W GAS2 Putative 1,3-beta-glucanosyltransferase has similarity to Gas1p; SubName: Full=ZYRO0A12540p;
Protein domain map
Database cross references:
Gene3D: G3DSA:3.20.20.80
InterPro: IPR004886
InterPro: IPR012946
InterPro: IPR013781
InterPro: IPR017853
KEGG: zro:ZYRO0A12540g
Pfam: PF03198
RefSeq: XP_002494905.1
SMART: SM00768
UniProtKB/TrEMBL: C5DNY1
UniProtKB: C5DNY1_ZYGRC
Phylogeny
PhylomeDB:ZYRO0A12540g
Gene3D: G3DSA:3.20.20.80
InterPro: IPR004886
InterPro: IPR012946
InterPro: IPR013781
InterPro: IPR017853
KEGG: zro:ZYRO0A12540g
Pfam: PF03198
RefSeq: XP_002494905.1
SMART: SM00768
UniProtKB/TrEMBL: C5DNY1
UniProtKB: C5DNY1_ZYGRC
Phylogeny
PhylomeDB:ZYRO0A12540gGene Ontology terms
Sequence data
>ZYRO0A12540g.nt ATGAAAATGAGTTGGAGAGGCATTCTTTTTGTATTATCAAGTATCGTAAGCGCGGTAACT GCGATTTCAGCGCTGAACCGAAATTCTGTATTTGACATATATTCTGATAGCATTGCACCA ATCGAAGTCGTTGGGAGGAAATTTTACAACTCTAGAACTGGAAATCAGTTCTTTTTGAGA GGTGTTGCGTACCAACCAACGATAGCGTCAGAATCTTGGAATCCTGAAATATTAAATTCG GAGACCAACTATATCGATCCTCTGGCAGAACCATCTCTATGCCTTAGAGATCTCCCATTC TTCGAAAAATTGGATGTAAATACATTAAGAGTGTATTCTATCGATACTAGAAAAAATCAT GATGTCTGCATGGAAGCATTAGCGAACAGTGGCATTTACGTATTGATAGATTTATCTGAG CCAAATCATTCCATCGAGAGAAATCGACCAAGTTGGGATATCTCAATTTTCGAAAGGTAT ACCTCTGTAGTAGATGTAATGCAAAAATATTCAAACGTTCTTGGATTCTTTGCAGGTAAC GAGGTGACTAATGATGAAACGAATACGAATGCATCTCCCTTTGTAAAAGCCGCCATTAGA GATGTAAAGCAATATATCCAAGAAAAGAGTTATAGACAGATTCCTGTTGGATATTCTTCA AGTGATGATGCCACCACTAGAGATTCTTTGGCAAAATATTTTGTCTGCGGTGGTGAAACT GCAGCTGATTTCTATGGTATTAACATGTACGAATGGTGCGGTTATTCGTCATATGCAACC AGTGGATATAGAGAACGAACTTTGGAGTTTGCCAACTATCCTATTCCTGTTTTCTTTTCA GAATTTGGTTGTAATAGTGTTAGACCAAGACCATTCACTGAAGTTAGTGCCATATTTGGG CCCAAGATGTCTCAAGTTTGGTCTGGTGGCCTAGCGTACATGTATTTTGAAGAGGAAAAC GAATACGGCTTAGTAAAGATTGACGAAACCGGTTCAGTTCATGAATTGGAAGATTTCAAA TATTTACAAAATGCTTATAGAAACACTTCACCTTATGGTATCACTAAGGAAAAATATCTG CAAGATATTAGTTTCGCCATTTCCACGCAGTCTGTTGAATGTCCTAATGAAGTGTCTGCC GCAAACACTCACACACCCTGGAAAGCAAATGTGGAAATACCACCATCTCCCAATGCCAAA ATATGTCAATGTTTGGAGCAAGTCTTACCATGTCTTGTATCACCATTGAATGGTTGGAAT TTTCAAGATCATTTTGATTATGCATGTAGTCAAGTGGATTGTTCAGATATTACCACTGAT GGCGAAAAGGGAATTTACGGTGAATTTTCATACTGCTTGCCTGAACAAAAATTATCATTA GAGATCAGTAAAATGTACCATATGAGAAACCACCCCACTGGAGTTTGTCCCATGAGCAGC AATAACGTCTATTATAATGCGCAGAGTATGAATATAACTGACCCCATGTGTATTGAAGTT TCCCACAGATTGCAGGAATTACAAAAGGCGGCAGACAGTAGAAAGACACCAGCAGTAAAA AAATTAGTTAAACCCAAAATGAAAAATGCCAGTCATACTAAACTTTTATTAGATACAGAC TCTGGTTCTTCGGTAAAGTTTAAATATTCAGGATATGCAATTCTACTCATCTCCATTATA TTTGCCACTATGGTCTTTTAG
>ZYRO0A12540g.cds ATGAAAATGAGTTGGAGAGGCATTCTTTTTGTATTATCAAGTATCGTAAGCGCGGTAACT GCGATTTCAGCGCTGAACCGAAATTCTGTATTTGACATATATTCTGATAGCATTGCACCA ATCGAAGTCGTTGGGAGGAAATTTTACAACTCTAGAACTGGAAATCAGTTCTTTTTGAGA GGTGTTGCGTACCAACCAACGATAGCGTCAGAATCTTGGAATCCTGAAATATTAAATTCG GAGACCAACTATATCGATCCTCTGGCAGAACCATCTCTATGCCTTAGAGATCTCCCATTC TTCGAAAAATTGGATGTAAATACATTAAGAGTGTATTCTATCGATACTAGAAAAAATCAT GATGTCTGCATGGAAGCATTAGCGAACAGTGGCATTTACGTATTGATAGATTTATCTGAG CCAAATCATTCCATCGAGAGAAATCGACCAAGTTGGGATATCTCAATTTTCGAAAGGTAT ACCTCTGTAGTAGATGTAATGCAAAAATATTCAAACGTTCTTGGATTCTTTGCAGGTAAC GAGGTGACTAATGATGAAACGAATACGAATGCATCTCCCTTTGTAAAAGCCGCCATTAGA GATGTAAAGCAATATATCCAAGAAAAGAGTTATAGACAGATTCCTGTTGGATATTCTTCA AGTGATGATGCCACCACTAGAGATTCTTTGGCAAAATATTTTGTCTGCGGTGGTGAAACT GCAGCTGATTTCTATGGTATTAACATGTACGAATGGTGCGGTTATTCGTCATATGCAACC AGTGGATATAGAGAACGAACTTTGGAGTTTGCCAACTATCCTATTCCTGTTTTCTTTTCA GAATTTGGTTGTAATAGTGTTAGACCAAGACCATTCACTGAAGTTAGTGCCATATTTGGG CCCAAGATGTCTCAAGTTTGGTCTGGTGGCCTAGCGTACATGTATTTTGAAGAGGAAAAC GAATACGGCTTAGTAAAGATTGACGAAACCGGTTCAGTTCATGAATTGGAAGATTTCAAA TATTTACAAAATGCTTATAGAAACACTTCACCTTATGGTATCACTAAGGAAAAATATCTG CAAGATATTAGTTTCGCCATTTCCACGCAGTCTGTTGAATGTCCTAATGAAGTGTCTGCC GCAAACACTCACACACCCTGGAAAGCAAATGTGGAAATACCACCATCTCCCAATGCCAAA ATATGTCAATGTTTGGAGCAAGTCTTACCATGTCTTGTATCACCATTGAATGGTTGGAAT TTTCAAGATCATTTTGATTATGCATGTAGTCAAGTGGATTGTTCAGATATTACCACTGAT GGCGAAAAGGGAATTTACGGTGAATTTTCATACTGCTTGCCTGAACAAAAATTATCATTA GAGATCAGTAAAATGTACCATATGAGAAACCACCCCACTGGAGTTTGTCCCATGAGCAGC AATAACGTCTATTATAATGCGCAGAGTATGAATATAACTGACCCCATGTGTATTGAAGTT TCCCACAGATTGCAGGAATTACAAAAGGCGGCAGACAGTAGAAAGACACCAGCAGTAAAA AAATTAGTTAAACCCAAAATGAAAAATGCCAGTCATACTAAACTTTTATTAGATACAGAC TCTGGTTCTTCGGTAAAGTTTAAATATTCAGGATATGCAATTCTACTCATCTCCATTATA TTTGCCACTATGGTCTTTTAG
>ZYRO0A12540g.aa MKMSWRGILFVLSSIVSAVTAISALNRNSVFDIYSDSIAPIEVVGRKFYNSRTGNQFFLR GVAYQPTIASESWNPEILNSETNYIDPLAEPSLCLRDLPFFEKLDVNTLRVYSIDTRKNH DVCMEALANSGIYVLIDLSEPNHSIERNRPSWDISIFERYTSVVDVMQKYSNVLGFFAGN EVTNDETNTNASPFVKAAIRDVKQYIQEKSYRQIPVGYSSSDDATTRDSLAKYFVCGGET AADFYGINMYEWCGYSSYATSGYRERTLEFANYPIPVFFSEFGCNSVRPRPFTEVSAIFG PKMSQVWSGGLAYMYFEEENEYGLVKIDETGSVHELEDFKYLQNAYRNTSPYGITKEKYL QDISFAISTQSVECPNEVSAANTHTPWKANVEIPPSPNAKICQCLEQVLPCLVSPLNGWN FQDHFDYACSQVDCSDITTDGEKGIYGEFSYCLPEQKLSLEISKMYHMRNHPTGVCPMSS NNVYYNAQSMNITDPMCIEVSHRLQELQKAADSRKTPAVKKLVKPKMKNASHTKLLLDTD SGSSVKFKYSGYAILLISIIFATMVF*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/ZYRO/ZYRO0A12540p