HomeYALI0F32153g
similar to uniprot|P46677 Saccharomyces cerevisiae YGR274c TAF145 TFIID subunit (TBP-associated factor)
Element type: CDS
Element length: 3243 nucleotides,
on anti-sense strand of
Yali0F: complement(3985832..3989074).
Other names:
YALI-CDS0355.1
YALI-IPF1765
Coding sequence: 1081 codons.
Element length: 3243 nucleotides,
on anti-sense strand of
Yali0F: complement(3985832..3989074).
Other names:
YALI-CDS0355.1
YALI-IPF1765
Coding sequence: 1081 codons.
Database cross references:
EMBL: CR382132
GeneID: 2907745
GenomeReviews: CR382132_GR
HOGENOM: HBG398361
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382132
GeneID: 2907745
GenomeReviews: CR382132_GR
HOGENOM: HBG398361
Homologs and Orthologs
Homologs in protein family: GL3R1454Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0F32153p 
similar to uniprot|P46677 Saccharomyces cerevisiae YGR274c TAF145 TFIID subunit (TBP-associated factor); SubName: Full=YALI0F32153p;
Protein domain map
Database cross references:
InterPro: IPR001878
InterPro: IPR022591
KEGG: yli:YALI0F32153g
Pfam: PF12157
RefSeq: XP_506122.1
SMART: SM00343
UniProtKB/TrEMBL: Q6BZP0
UniProtKB: Q6BZP0_YARLI
Phylogeny
PhylomeDB:YALI0F32153g
InterPro: IPR001878
InterPro: IPR022591
KEGG: yli:YALI0F32153g
Pfam: PF12157
RefSeq: XP_506122.1
SMART: SM00343
UniProtKB/TrEMBL: Q6BZP0
UniProtKB: Q6BZP0_YARLI
Phylogeny
PhylomeDB:YALI0F32153gComputed results for YALI0F32153p
None available yet
Gene Ontology terms
Sequence data
>YALI0F32153g.nt ATGGCCGACGAAGACGCTGACTGGGCCAGAGCACTCGGTGGCGACCCTACCAACGTTGGA GGTGTTGTCCCATCGCTTGATGGTGCAGATGCCATCAAACACTCCGCAGACGCCATCGAT TTCGAGGACGAAGACGAGCTGGCAGATGATGAGCTGCCCGAAGAGGAGGAAGCAACCGGA AACAACGTGATTGAGGAGGATGAGGAGATGATTGTCGAGGAGGAAGCTGGTCTATCCATG TCTGGGAACGATAGCCTGGGTGGCTTCCAGTTCCACATTGGCGAGGATGAGCTTGGAGGA TTTGATCTGGGAGATGACGAACATTGGAGCCAGAGCTGGGGAGGCAACGAAATGGACGAG CTGCCTGTGATGGACGAGTACGATGATGGTGGTGTTGTCCATGCTGGAATGTTGAATAAC AATGCCAACAGCAACAACCATGTCGTGCATGCCGGTGAACCTGGAGAGTCAGACGAAGAG ATGGAGATGGAGGCTGCTGGAGGCGACGGGCTGGACATGAAGCTTGACGCAGATGAGCTA GGCGAACTGGGAAAGTTAGGGCCTGCCGACAAGATGGACGCCTCTGGATTTGATGACATC CAACACATGAACATCCAGGAGCTCAATCTGGAGGAAATTGCACAGATGGCGCGTCAGGCT GATCTTGACATGCTTGCAATGTACTTCCCCGGGTTCCAAAAGGGCAAGCCTATGAAGATG AACTCGCTCTTCTACAACAAGTTTGCTGTTCTGAGTCTGCCCAAGCCTAACACTGCTCGT CCGTGTGTCCCCACAAAGACTAAGCTGGAGGTGGCGCCAGATGAGCGTAAGATGACACGA GGAACAGTGTGGGTGGACCATGCTAAGCGGCGACCGGGTGTTGTAACAGTCACCGAGGCC GAGACGGGGGACGATAAGCAGGAACTGGCCCGAGAAAGCAGAACCACACAATCAGCAACA GACCAGCAGCTGCATTTCGACATTACTGACTGGAAGATCACGTGGGGAGATGAGGATGAT GGGGATGGAGACGTGGATATGGATTGCGAGGGCGAAAAGGTCAAGGAGGAACAAAAAGAG GTTGTTCCACAGCTCGGCGTGCACAGAAACGAAGAGGCCTGGAACGACGAGGCCTTGTTT GAAGGCGATGCTCTCAGTCAGGTGAAGAAGGTCAACCTCGATATGAACGACCCCAACCTA CTGTTCATCAACACAGATGGTCGTGTATCGAAGAATGTGACTCCTGCCATTCCCTCCACC GAACTACAGCTTCGAAACAGATTTAACCTCAGTAACGACCGAGCCTACGATATGCTCAAG GAGAACACACAGAGCAAGGTACGAGCCACTATTGGCAATCTGTCTATCGATCACTCCATG CCAGCTCTCCGACTGCAAAGTCCATTCTACAAAGTGCGAATCTCGAAGCCTCAGGCTCGT TCGTTCCATCGGCCATCATTTGTGGTGAAACCCAACACTACTGTTCACTTTTCGCGAATG AAGATCCGAAAGAAGAAGCGAGACAGGGGAAAGCCTATCAAGGATCTTTTGGCCAAGACT ACGGACTTGTCGTTGGGTGACTCTGCTCAGTACTTCCTCATGGAGTACGCTGAGCAATTC CCCATGACCCTCTCCAACTACGGAATGGGCTCTAAGATGATCAACTATTACAGAAAAGCT TCTCCTGAGGATACTTCCCGACCTAAGCTCCCCGTTGGAGAGACACATGTTCTGTCGGTC CAGGACAAGTCTCCCTTTTGGAACTTTGGATTCGTCGAGCCGGGTAAGATTGTGCCTACT CTGTACAACAAGATGATCCGAGCCCCCGTATTCAAGCATACACCACGTGACACAGATTTT CTTATGATCCGATCAACTGGAGGCGATGTGACTGGGGCTGGCCAAAAGTACTTTCTGAGA AATATTCCACATGTCTTCACTGTCGGTCAAACATACCCCGTGACTGACGTACCCGGGCCA CACTCTCGAAAGGTAACCACGGCTTCCAAAAACCGGCTCAAGATGATTGTCTATCGAGTG CTAAACGCATCACCTTATCATAGAATCAACGTGAAGGATATCGCCGAACATTTCCCTGAT CAGATTGACACTCAAAACCGACAGAGGCTCAAGGAGTTTATGGAGTATCAGCGAACAGGT GAGGATCAGGGTTACTGGAAGGTCAAGCCTACCGATACTCTTCCTGGCGAGGACGGCATC AGAACCATGATCACACCCGAGGACATCACTCTCTTGGAGGCCATGCAGGTTGGTGTTCAG AACCTTGAGGATGCTGGATATGGTCGAACTGACGACATTGAGAGCGACCATGAGAATGGC GAGGAGTCTGGTCTTTCTCTGGAGGAGCAGTCTGCTCCATGGAACCTGACCAGAAACTTC ATCAACGCTACCCAGGGCAAGGCCATGCTGCAGCTGCATGGCGAGGGTGATCCTTCTGGT CGAGGCGAGGGTTTCTCATTCCTCAAGACTTCCATGAAGGGTGGTTTTCAGGCCGCTGGT GAGTCTGTCAATGAGAAGCTTGACAAGAGCAAGTTTGGCGGACACAAGTACAACGTGGCC CACCAGCAGCGTGCATACGACGATGAGATCAGCCGAATCTGGTATGCCCAGTGTCGAGCT CTCAGCAACACCAAGGTACCTGAAGAGAACGACGAAGATTCAAAATGGGCCGATGCTGAG GAGCAGCGAGAACAACAAGAGCGGGTGTCTACGCCTGGTTTCACTAGCGCAGCCTTCCCC GACGATGATAACATGTCGCTCATGTCAGGCGACTCGGCCATGCAGCAGCGCAACAAGGTG CTGCGAATCACGCGAATGGTCAAGGACGAGCACGGTATCATCCAGCGAAAGGTCGAGACC ATCAAGGACCCCAGTGTCATTCGAGCATACATTCGACGACGAAAGCTGATGGACGAGGCC AAGCTAACACTCGACGACTTAGACCCCACCAACGACGAGGAGGCCAACAAGCGAAACAAG CGGCTGCTGGAGGAGCGGCTGGAGGATCTGCGAAAGAAGGGCGAGCGACGAAAGCAGCGA CAGGCCCAGAAGCAGGGTCTCAACACAATCAACCTCGGCACCGACACTCCTCCCCCTTCA GGCAAGGGTGTCGGCAAAGGCAAGGGTCCGCGACAGTGCAAGAACTGTGGTGCATATGGC CACATTCGAACCAACAAGAGTTGTCCCATGTACAACCAACTCGAGGGACCTGCCAACCTG TAG
>YALI0F32153g.cds ATGGCCGACGAAGACGCTGACTGGGCCAGAGCACTCGGTGGCGACCCTACCAACGTTGGA GGTGTTGTCCCATCGCTTGATGGTGCAGATGCCATCAAACACTCCGCAGACGCCATCGAT TTCGAGGACGAAGACGAGCTGGCAGATGATGAGCTGCCCGAAGAGGAGGAAGCAACCGGA AACAACGTGATTGAGGAGGATGAGGAGATGATTGTCGAGGAGGAAGCTGGTCTATCCATG TCTGGGAACGATAGCCTGGGTGGCTTCCAGTTCCACATTGGCGAGGATGAGCTTGGAGGA TTTGATCTGGGAGATGACGAACATTGGAGCCAGAGCTGGGGAGGCAACGAAATGGACGAG CTGCCTGTGATGGACGAGTACGATGATGGTGGTGTTGTCCATGCTGGAATGTTGAATAAC AATGCCAACAGCAACAACCATGTCGTGCATGCCGGTGAACCTGGAGAGTCAGACGAAGAG ATGGAGATGGAGGCTGCTGGAGGCGACGGGCTGGACATGAAGCTTGACGCAGATGAGCTA GGCGAACTGGGAAAGTTAGGGCCTGCCGACAAGATGGACGCCTCTGGATTTGATGACATC CAACACATGAACATCCAGGAGCTCAATCTGGAGGAAATTGCACAGATGGCGCGTCAGGCT GATCTTGACATGCTTGCAATGTACTTCCCCGGGTTCCAAAAGGGCAAGCCTATGAAGATG AACTCGCTCTTCTACAACAAGTTTGCTGTTCTGAGTCTGCCCAAGCCTAACACTGCTCGT CCGTGTGTCCCCACAAAGACTAAGCTGGAGGTGGCGCCAGATGAGCGTAAGATGACACGA GGAACAGTGTGGGTGGACCATGCTAAGCGGCGACCGGGTGTTGTAACAGTCACCGAGGCC GAGACGGGGGACGATAAGCAGGAACTGGCCCGAGAAAGCAGAACCACACAATCAGCAACA GACCAGCAGCTGCATTTCGACATTACTGACTGGAAGATCACGTGGGGAGATGAGGATGAT GGGGATGGAGACGTGGATATGGATTGCGAGGGCGAAAAGGTCAAGGAGGAACAAAAAGAG GTTGTTCCACAGCTCGGCGTGCACAGAAACGAAGAGGCCTGGAACGACGAGGCCTTGTTT GAAGGCGATGCTCTCAGTCAGGTGAAGAAGGTCAACCTCGATATGAACGACCCCAACCTA CTGTTCATCAACACAGATGGTCGTGTATCGAAGAATGTGACTCCTGCCATTCCCTCCACC GAACTACAGCTTCGAAACAGATTTAACCTCAGTAACGACCGAGCCTACGATATGCTCAAG GAGAACACACAGAGCAAGGTACGAGCCACTATTGGCAATCTGTCTATCGATCACTCCATG CCAGCTCTCCGACTGCAAAGTCCATTCTACAAAGTGCGAATCTCGAAGCCTCAGGCTCGT TCGTTCCATCGGCCATCATTTGTGGTGAAACCCAACACTACTGTTCACTTTTCGCGAATG AAGATCCGAAAGAAGAAGCGAGACAGGGGAAAGCCTATCAAGGATCTTTTGGCCAAGACT ACGGACTTGTCGTTGGGTGACTCTGCTCAGTACTTCCTCATGGAGTACGCTGAGCAATTC CCCATGACCCTCTCCAACTACGGAATGGGCTCTAAGATGATCAACTATTACAGAAAAGCT TCTCCTGAGGATACTTCCCGACCTAAGCTCCCCGTTGGAGAGACACATGTTCTGTCGGTC CAGGACAAGTCTCCCTTTTGGAACTTTGGATTCGTCGAGCCGGGTAAGATTGTGCCTACT CTGTACAACAAGATGATCCGAGCCCCCGTATTCAAGCATACACCACGTGACACAGATTTT CTTATGATCCGATCAACTGGAGGCGATGTGACTGGGGCTGGCCAAAAGTACTTTCTGAGA AATATTCCACATGTCTTCACTGTCGGTCAAACATACCCCGTGACTGACGTACCCGGGCCA CACTCTCGAAAGGTAACCACGGCTTCCAAAAACCGGCTCAAGATGATTGTCTATCGAGTG CTAAACGCATCACCTTATCATAGAATCAACGTGAAGGATATCGCCGAACATTTCCCTGAT CAGATTGACACTCAAAACCGACAGAGGCTCAAGGAGTTTATGGAGTATCAGCGAACAGGT GAGGATCAGGGTTACTGGAAGGTCAAGCCTACCGATACTCTTCCTGGCGAGGACGGCATC AGAACCATGATCACACCCGAGGACATCACTCTCTTGGAGGCCATGCAGGTTGGTGTTCAG AACCTTGAGGATGCTGGATATGGTCGAACTGACGACATTGAGAGCGACCATGAGAATGGC GAGGAGTCTGGTCTTTCTCTGGAGGAGCAGTCTGCTCCATGGAACCTGACCAGAAACTTC ATCAACGCTACCCAGGGCAAGGCCATGCTGCAGCTGCATGGCGAGGGTGATCCTTCTGGT CGAGGCGAGGGTTTCTCATTCCTCAAGACTTCCATGAAGGGTGGTTTTCAGGCCGCTGGT GAGTCTGTCAATGAGAAGCTTGACAAGAGCAAGTTTGGCGGACACAAGTACAACGTGGCC CACCAGCAGCGTGCATACGACGATGAGATCAGCCGAATCTGGTATGCCCAGTGTCGAGCT CTCAGCAACACCAAGGTACCTGAAGAGAACGACGAAGATTCAAAATGGGCCGATGCTGAG GAGCAGCGAGAACAACAAGAGCGGGTGTCTACGCCTGGTTTCACTAGCGCAGCCTTCCCC GACGATGATAACATGTCGCTCATGTCAGGCGACTCGGCCATGCAGCAGCGCAACAAGGTG CTGCGAATCACGCGAATGGTCAAGGACGAGCACGGTATCATCCAGCGAAAGGTCGAGACC ATCAAGGACCCCAGTGTCATTCGAGCATACATTCGACGACGAAAGCTGATGGACGAGGCC AAGCTAACACTCGACGACTTAGACCCCACCAACGACGAGGAGGCCAACAAGCGAAACAAG CGGCTGCTGGAGGAGCGGCTGGAGGATCTGCGAAAGAAGGGCGAGCGACGAAAGCAGCGA CAGGCCCAGAAGCAGGGTCTCAACACAATCAACCTCGGCACCGACACTCCTCCCCCTTCA GGCAAGGGTGTCGGCAAAGGCAAGGGTCCGCGACAGTGCAAGAACTGTGGTGCATATGGC CACATTCGAACCAACAAGAGTTGTCCCATGTACAACCAACTCGAGGGACCTGCCAACCTG TAG
>YALI0F32153g.aa MADEDADWARALGGDPTNVGGVVPSLDGADAIKHSADAIDFEDEDELADDELPEEEEATG NNVIEEDEEMIVEEEAGLSMSGNDSLGGFQFHIGEDELGGFDLGDDEHWSQSWGGNEMDE LPVMDEYDDGGVVHAGMLNNNANSNNHVVHAGEPGESDEEMEMEAAGGDGLDMKLDADEL GELGKLGPADKMDASGFDDIQHMNIQELNLEEIAQMARQADLDMLAMYFPGFQKGKPMKM NSLFYNKFAVLSLPKPNTARPCVPTKTKLEVAPDERKMTRGTVWVDHAKRRPGVVTVTEA ETGDDKQELARESRTTQSATDQQLHFDITDWKITWGDEDDGDGDVDMDCEGEKVKEEQKE VVPQLGVHRNEEAWNDEALFEGDALSQVKKVNLDMNDPNLLFINTDGRVSKNVTPAIPST ELQLRNRFNLSNDRAYDMLKENTQSKVRATIGNLSIDHSMPALRLQSPFYKVRISKPQAR SFHRPSFVVKPNTTVHFSRMKIRKKKRDRGKPIKDLLAKTTDLSLGDSAQYFLMEYAEQF PMTLSNYGMGSKMINYYRKASPEDTSRPKLPVGETHVLSVQDKSPFWNFGFVEPGKIVPT LYNKMIRAPVFKHTPRDTDFLMIRSTGGDVTGAGQKYFLRNIPHVFTVGQTYPVTDVPGP HSRKVTTASKNRLKMIVYRVLNASPYHRINVKDIAEHFPDQIDTQNRQRLKEFMEYQRTG EDQGYWKVKPTDTLPGEDGIRTMITPEDITLLEAMQVGVQNLEDAGYGRTDDIESDHENG EESGLSLEEQSAPWNLTRNFINATQGKAMLQLHGEGDPSGRGEGFSFLKTSMKGGFQAAG ESVNEKLDKSKFGGHKYNVAHQQRAYDDEISRIWYAQCRALSNTKVPEENDEDSKWADAE EQREQQERVSTPGFTSAAFPDDDNMSLMSGDSAMQQRNKVLRITRMVKDEHGIIQRKVET IKDPSVIRAYIRRRKLMDEAKLTLDDLDPTNDEEANKRNKRLLEERLEDLRKKGERRKQR QAQKQGLNTINLGTDTPPPSGKGVGKGKGPRQCKNCGAYGHIRTNKSCPMYNQLEGPANL *
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0F32153g