HomeYALI0F20504g
similar to uniprot|P00431 Saccharomyces cerevisiae YKR066c CCP1 Mitochondrial cytochrome-c peroxidase
Element type: CDS
Element length: 1023 nucleotides,
on sense strand of
Yali0F: 2727200..2728222.
Other names:
YALI-CDS3888.1
YALI-IPF1091
Coding sequence: 341 codons.
Element length: 1023 nucleotides,
on sense strand of
Yali0F: 2727200..2728222.
Other names:
YALI-CDS3888.1
YALI-IPF1091
Coding sequence: 341 codons.
Database cross references:
EMBL: CR382132
GeneID: 2908688
HOGENOM: Q6C0Z6
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382132
GeneID: 2908688
HOGENOM: Q6C0Z6
Homologs and Orthologs
Homologs in protein families: GL3C0873 GL3C0873.N2Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0F20504p 
similar to uniprot|P00431 Saccharomyces cerevisiae YKR066c CCP1 cytochrome-c peroxidase precursor
Protein domain map
Database cross references:
InterPro: IPR002016
InterPro: IPR002207
KEGG: yli:YALI0F20504g
PRINTS: PR00458
PRINTS: PR00459
PROSITE: PS00435
PROSITE: PS00436
PROSITE: PS50873
PeroxiBase: 2343
Pfam: PF00141
RefSeq: XP_505666.1
UniProtKB/Swiss-Prot: Q6C0Z6
UniprotKB: CCPR_YARLI
InterPro: IPR002016
InterPro: IPR002207
KEGG: yli:YALI0F20504g
PRINTS: PR00458
PRINTS: PR00459
PROSITE: PS00435
PROSITE: PS00436
PROSITE: PS50873
PeroxiBase: 2343
Pfam: PF00141
RefSeq: XP_505666.1
UniProtKB/Swiss-Prot: Q6C0Z6
UniprotKB: CCPR_YARLI
Sequence data
Nucleotide sequence
>YALI0F20504g.nt TCAGAGTGTATATATTGATACAATACCACAACAGAGAGAGCGAGAGAGCAACACCAGCAC AACATCCTACGCTGAGGTAACACCATATATATGCACTAATTGTAGCCCTTCTTGATGTCT CTCGCTCTTGTCTTTTCCACGTGGCTGAAGTTGCCCGCGTTTGTAGCACAACGTTGGACG CAAATAGACTCTGCCAATGAGAGATCCGGTTATTTTTCTTACGGGCCTAGAATGGATAAA GTTGAGAGTTTGGCGCACCCCACGAAGTTAGAAAGGAGGGTGAGAGAAGTGGAGGGCGAT GTTTGGGGGTGTCTGTGGGGCGTTTGAGACGAAACCAAGTCTTGATACGCGATCAAAGAC CCCGAAAGACGCAATTGAGGCCCCAAAATAGCTCTTTTCCGCCGACAACAGCCCAAACAC ATCCTCTGCAAATCATGCTTAGCTTTGTCACTGTAACTTTGGGTGGTGTGTTTCTTGAGC TGTGGTAGCACCTGAGGCGAGACGGGTCGTGCCTGTAATGGTCCATGTAGTTAACATATC AGGCTCAAATTTCTCACATGACAAATACATACTTCTCTCAGGCAGCCAGCGCAGACAGGA ATACACTTGCGCAGTGCAGCTCTTCACCCACTGCTGCATTGTCACGGTCAGGTCATATGC TAAGGATACTATTTGTAGTAGTGCGAGTGCGAGTCTCGAAAGACAAAGTAAGATACTGAC TATAGATGAGATAGCAATAAAAAGTGGGTAGTAGCAATGGCGTGTGTTTGAGCTGAGATT AATGCCTGAACACTCTCCTGGGAAATACACACACACCTCTACAAGTAAGGCACTCACCAC TACACCCCGCTAGACTTGCCATCATCCTCTGTCGCAACACAAAGCAACCCCTCACCTGCA TAATGTAAGACGCCTGGCAGAAACCTAACCACCCCCACTATATATATAACTAGTGGAGGG CCGCAAAGTTGCCTCCTTATACACAAGACACACTCTCAAGATGCGATCTTTCCGAGCAGT CCGAAACTTCTCCACCACCGCCAAGCGCCTCAGCCAGGCCCCCAAGGCCTCCACTCCTAA CGCCTCCTCTGGAAACGGCTTTGTGTTGGCCTTTGTGGCCGCCGCCGCTGGAGCCGGTGC CTACTACTACTACGCCAACTCCCCTGCCGCCAAGGTCGAGACCTTCAACGCCACCAAGGC CGACTACCAGAAGGTGTACGACGCTATTGCCGACAAGCTGATTGAGGACGACGACTATGA TGATGGATCTTACGGACCCGTCCTCCTGCGACTCGCCTGGCACTCGTCTGGTACCTACAA CAAGTCTGATAACAAGTTTGGCTCTTCCGGAGGTACCATGCGATTCAAGCCCGAGGCTTC TCATGCTGCCAACAATGGCCTGGTTAACGCCAGAAACTTCCTCAAGCCCATCCACGAGAA GTTCCCTTGGATCTCCACCGGTGATCTGTACACTCTTGGTGGTGTCACCGCCGTCCAGGA GCTCGGTGGCCCTATCATCCCCTGGAAGCGAGGCCGTGTCGACGAGCCCGAGTCTGCTTC TCCTCCCGATGGATCTCTTCCCGACGCCTCTCAGGGCGCTACTCATGTGCGAAACGTTTT CAACAGACAGGGCTTCAACGACCAGGAGATGGTTGCTTTGATTGGAGCTCACGCTCTCGG CCGATGCCACAAGCAGAACTCTGGCTTCGAGGGCCCCTGGACTTTCTCCCCTACCATGTT CACCAACGATTTCTACAAGCTCCTGCTCGACGATAAGTGGCAGTGGAAGAAGTGGGACGG AAACCCTCAGTACGAGGACGTCAAGACCAAGTCTCTGATGATGCTGCCCACCGACATGGC TCTTGCTACCGACAAGAACTTCAAGAAGTGGGCCACTGCCTACGCTAAGGACCAGGATCT CTTCTTCAAGGACTTTTCTGCTGCATTCTCCAAGATGCTCAACAACGGTGTTGACTTCCC CCAGGGAACTGAGATCTGGGAGTTCAAGCCCAAGAACGCCTAATTCTGGAATTCGGCGAT TTAGAAGAGTGCAAGCGCTCGATTAATGTATTGTAAGTTATCCATCATCATTGACAATTG TATTGTAGTGTAGACTTCTGGCTCAGGGTTCAAGCCAAGCCAAGCTTTCTGCAGGGAGAG ATGTAATGAACTGTATCGTGTTCGAGACTTCGACGCATTAGCTACAGTATATCCCGTACT ACTACTGTATCCCCGAACGAATACACCGAAAGATGTTGAGATGTACTGGCTTGTATTTCA TATGATCCGTGTACTTTTAGGGGAGGCAGGTGTGCTGAGATCT
Coding sequence
>YALI0F20504g.cds ATGCGATCTTTCCGAGCAGTCCGAAACTTCTCCACCACCGCCAAGCGCCTCAGCCAGGCC CCCAAGGCCTCCACTCCTAACGCCTCCTCTGGAAACGGCTTTGTGTTGGCCTTTGTGGCC GCCGCCGCTGGAGCCGGTGCCTACTACTACTACGCCAACTCCCCTGCCGCCAAGGTCGAG ACCTTCAACGCCACCAAGGCCGACTACCAGAAGGTGTACGACGCTATTGCCGACAAGCTG ATTGAGGACGACGACTATGATGATGGATCTTACGGACCCGTCCTCCTGCGACTCGCCTGG CACTCGTCTGGTACCTACAACAAGTCTGATAACAAGTTTGGCTCTTCCGGAGGTACCATG CGATTCAAGCCCGAGGCTTCTCATGCTGCCAACAATGGCCTGGTTAACGCCAGAAACTTC CTCAAGCCCATCCACGAGAAGTTCCCTTGGATCTCCACCGGTGATCTGTACACTCTTGGT GGTGTCACCGCCGTCCAGGAGCTCGGTGGCCCTATCATCCCCTGGAAGCGAGGCCGTGTC GACGAGCCCGAGTCTGCTTCTCCTCCCGATGGATCTCTTCCCGACGCCTCTCAGGGCGCT ACTCATGTGCGAAACGTTTTCAACAGACAGGGCTTCAACGACCAGGAGATGGTTGCTTTG ATTGGAGCTCACGCTCTCGGCCGATGCCACAAGCAGAACTCTGGCTTCGAGGGCCCCTGG ACTTTCTCCCCTACCATGTTCACCAACGATTTCTACAAGCTCCTGCTCGACGATAAGTGG CAGTGGAAGAAGTGGGACGGAAACCCTCAGTACGAGGACGTCAAGACCAAGTCTCTGATG ATGCTGCCCACCGACATGGCTCTTGCTACCGACAAGAACTTCAAGAAGTGGGCCACTGCC TACGCTAAGGACCAGGATCTCTTCTTCAAGGACTTTTCTGCTGCATTCTCCAAGATGCTC AACAACGGTGTTGACTTCCCCCAGGGAACTGAGATCTGGGAGTTCAAGCCCAAGAACGCC TAA
Predicted translation product
>YALI0F20504g.aa MRSFRAVRNFSTTAKRLSQAPKASTPNASSGNGFVLAFVAAAAGAGAYYYYANSPAAKVE TFNATKADYQKVYDAIADKLIEDDDYDDGSYGPVLLRLAWHSSGTYNKSDNKFGSSGGTM RFKPEASHAANNGLVNARNFLKPIHEKFPWISTGDLYTLGGVTAVQELGGPIIPWKRGRV DEPESASPPDGSLPDASQGATHVRNVFNRQGFNDQEMVALIGAHALGRCHKQNSGFEGPW TFSPTMFTNDFYKLLLDDKWQWKKWDGNPQYEDVKTKSLMMLPTDMALATDKNFKKWATA YAKDQDLFFKDFSAAFSKMLNNGVDFPQGTEIWEFKPKNA*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0F20504p