HomeYALI0F07865g
some similarities with uniprot|O13297 Saccharomyces cerevisiae YPL228w CET1 (ohnolog of YMR180C) Beta (RNA 5'-triphosphatase) subunit of the mRNA capping enzyme, a heterodimer (the other subunit is CEG1, a guanylyltransferase) involved in adding the 5' cap to mRNA
Element type: CDS
Element length: 1161 nucleotides,
on anti-sense strand of
Yali0F: complement(1123076..1124236).
Other names:
YALI-CDS3023.1
YALI-IPF913
Coding sequence: 387 codons.
Element length: 1161 nucleotides,
on anti-sense strand of
Yali0F: complement(1123076..1124236).
Other names:
YALI-CDS3023.1
YALI-IPF913
Coding sequence: 387 codons.
Database cross references:
EMBL: CR382132
GeneID: 2908374
HOGENOM: Q6C2H4
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382132
GeneID: 2908374
HOGENOM: Q6C2H4
Homologs and Orthologs
Homologs in protein families: GL3C0218 GL3C0218.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0F07865p 
some similarities with uniprot|O13297 Saccharomyces cerevisiae YPL228w CET1 RNA 5'-triphosphatase (mRNA capping enzyme beta subunit)
Protein domain map
Database cross references:
InterPro: IPR004206
KEGG: yli:YALI0F07865g
Pfam: PF02940
RefSeq: XP_505138.1
UniProtKB/Swiss-Prot: Q6C2H4
UniprotKB: CET1_YARLI
InterPro: IPR004206
KEGG: yli:YALI0F07865g
Pfam: PF02940
RefSeq: XP_505138.1
UniProtKB/Swiss-Prot: Q6C2H4
UniprotKB: CET1_YARLI
Gene Ontology terms
None available yet
Sequence data
>YALI0F07865g.nt GATTGGTAAGCACGCGATTTAAATGCGAGTCTTCTCTATTACTTTTCATGTATCTTTTTT GGAAGCTCTATGAGGAGGTATGGTAGAGACATAAATTACTTCCCTCTATGTTGATCGTAC ATATTACGTAATAGCAGACTCTACACCAGTCTGCCCACTAATACAAGACAATAGACGACC TCAGACGACCTCAGACGACCTCTCCAACCATTCATAGAGTGGCTAAATCACTTTTGACCG ATTAAACCGGCAAAAATACACACAACAATCATCTCTATCCATTGTTCGATAGCTCCACAG GTGGAACCAATATATCCTGCCTGTATACTAATCAGTTACCAACCCAGAAGAGCATCACGA GAACGAGAACCTCACGAACCACACAGGACACGAGCCAATAAAACAACACCTCCATTTTTG CTAAACAATCAAAAATAACACCCCTTCCCTCCACCACTTTCTCTATAGCATGTCCGCAAC ACCCAGGTACCAGCCCGTTGCCCAACTTTAGTAGTCACGTGACCCCACTACCCACCACTC CCATCATCTGGATGCAGCATACATTGGATATCAACTCATGACTCAGGGTAAGGACCGATC CGCTGGATAGTGTCCGTTGTTCAAAATCCGACTGTAGAAAAAAAATCTGTTCTCCAATCA ATTTCGGCTCACGTGACTTCATCAACCCTCTCTCCATCGTCCCCACTTCATGGGGTGGGC TGGCTGCCAGCCTTTGAAAAAACAGTGGTTAACAAAGTTTCGGCCGGGTGCAAAAACACA GTCGACTCACATGAGCATCTGGAGGAAGTGCCAAATCCCGTTTACTTGGTCTGAATCTGA TCTGCAACTGTTATCTCGAGCCCGACTTGCTGTTCCAAGTCTCCGTTAGTGTTTGCAAAC GAACCGACACCCAGACAACACCACTCGTTGTACACACTCACCTCCACCACTCAACATCAC ACTCGTTACCAACATCTCTTCCCTTGCGCAAAAGTCCGATATGGACATTGGCAAGATGAT CAACGACGATAATGGGTCCGACTCGCGTCGCACCTCGGTTAAATCGCTTCTCAACAGCCC ACCCACCGGCCTACCGTCCAGTGACGACCGGCCAGACTCCAAGGCCTCCAGCACCAGCGA TTTGGCGCAACAGCTGACCAACGAGATGGAGAGCGGCGAAGACGACGATGACGAAGACGC CGCCGCTGCGGTCAACCACAAGCCCCGCCGGTACTCACGGCCTCCCATCTGGGCCACCAA GTGGCAGGGTACGGGGAGACATGCCGAGAGAGACCACAGACCTCCCCCTCACAGACAAGA TCGACGAGACCCGAGAATGGAGCGGCAATCAGGGGGATCACGTGCCCTACCAGCTTCCTC CACTACCACCATCACAGGCTGTCCTCCATCGATATCGGGCATCAAGCCGTTTGAAAGCGT CACTCGAACGGTGACTTCATGGTTGCATGCTCATCTGTCCACCATGTCGCCGGAGCAGCT TCAGACGGTCGAACTGGAGGCCAAGATTGGTACTATTCAGCACAAGAAGGCCGGCGCTGA TCGGGCTCGGCTAGACCTGCCTATTGTCACCGAGGCCGTGGTCAACCAGCAGTATGTCCA GGCCCAGTGTTCGTTCTCGTCACAGCTGCCCGAATCGCTGCTGGAAGAGGCCAAGCGCAT TTTGGACGCTGCAGACCCCAAGTTTATCAAGAGCACAGAGCATACGATCCACAGAGATGA AATTTACGAGGGTCAACAAGATAAGGGCAATCTGAGAATCACACGGGACGATGTCACAGG CAGACAAGTGGCCAAAATCAGAAAAAAGGCCATTGCTCACATTATGATCCATTGCCCCAC AGACCCATTTGACATTCGTCTGTCGCTAGCTACTGAAAGCCCCACAGACGACGTTCCTCA GGGAGTGTGTCGAACACGCCGAAAGGACCGAATTTCGTACCTTTATGACGGTTTCCGAGC AGACCTGACCAAGGTGTCTGGCTCCTCCATGTCCTCCGAGTTGGAAATGGAGGCCGACTC CCACAAGCTCATTGGCTACTTTACCGACAGAAACGACCCCCACAACATGGACAAGGTAGA GGAGCTGCTGCAGATTCTGCTGGACTCCATGCGGTATGTCAACCGGCGGCTCAAGGCGTA GGCTTATGTATATTAATATTTATAGATCGAACCGATCCAACAGAAGAGCGGGGCTCTATC TAGCGTTGGGTTGAAGTGGTGCCAGTTGGTGATCTGAGTAGGAACCAATGGTGGGTAAAG GGAAGGGTTATTTAGCGCCTACGTAGGGAAGTAGTGTGAAGGATCATCCAACAACATTTA CCCGTACAATATGTTTTCGTACAGTATGTACATACTTGTGCCATAGTTGTGAAACACGGT AAGAATGGTCTAATCACTACCCCACAATTTGGGAGCTAAAAGTGATGTTTTTCCCATATC A
>YALI0F07865g.cds ATGGACATTGGCAAGATGATCAACGACGATAATGGGTCCGACTCGCGTCGCACCTCGGTT AAATCGCTTCTCAACAGCCCACCCACCGGCCTACCGTCCAGTGACGACCGGCCAGACTCC AAGGCCTCCAGCACCAGCGATTTGGCGCAACAGCTGACCAACGAGATGGAGAGCGGCGAA GACGACGATGACGAAGACGCCGCCGCTGCGGTCAACCACAAGCCCCGCCGGTACTCACGG CCTCCCATCTGGGCCACCAAGTGGCAGGGTACGGGGAGACATGCCGAGAGAGACCACAGA CCTCCCCCTCACAGACAAGATCGACGAGACCCGAGAATGGAGCGGCAATCAGGGGGATCA CGTGCCCTACCAGCTTCCTCCACTACCACCATCACAGGCTGTCCTCCATCGATATCGGGC ATCAAGCCGTTTGAAAGCGTCACTCGAACGGTGACTTCATGGTTGCATGCTCATCTGTCC ACCATGTCGCCGGAGCAGCTTCAGACGGTCGAACTGGAGGCCAAGATTGGTACTATTCAG CACAAGAAGGCCGGCGCTGATCGGGCTCGGCTAGACCTGCCTATTGTCACCGAGGCCGTG GTCAACCAGCAGTATGTCCAGGCCCAGTGTTCGTTCTCGTCACAGCTGCCCGAATCGCTG CTGGAAGAGGCCAAGCGCATTTTGGACGCTGCAGACCCCAAGTTTATCAAGAGCACAGAG CATACGATCCACAGAGATGAAATTTACGAGGGTCAACAAGATAAGGGCAATCTGAGAATC ACACGGGACGATGTCACAGGCAGACAAGTGGCCAAAATCAGAAAAAAGGCCATTGCTCAC ATTATGATCCATTGCCCCACAGACCCATTTGACATTCGTCTGTCGCTAGCTACTGAAAGC CCCACAGACGACGTTCCTCAGGGAGTGTGTCGAACACGCCGAAAGGACCGAATTTCGTAC CTTTATGACGGTTTCCGAGCAGACCTGACCAAGGTGTCTGGCTCCTCCATGTCCTCCGAG TTGGAAATGGAGGCCGACTCCCACAAGCTCATTGGCTACTTTACCGACAGAAACGACCCC CACAACATGGACAAGGTAGAGGAGCTGCTGCAGATTCTGCTGGACTCCATGCGGTATGTC AACCGGCGGCTCAAGGCGTAG
>YALI0F07865g.aa MDIGKMINDDNGSDSRRTSVKSLLNSPPTGLPSSDDRPDSKASSTSDLAQQLTNEMESGE DDDDEDAAAAVNHKPRRYSRPPIWATKWQGTGRHAERDHRPPPHRQDRRDPRMERQSGGS RALPASSTTTITGCPPSISGIKPFESVTRTVTSWLHAHLSTMSPEQLQTVELEAKIGTIQ HKKAGADRARLDLPIVTEAVVNQQYVQAQCSFSSQLPESLLEEAKRILDAADPKFIKSTE HTIHRDEIYEGQQDKGNLRITRDDVTGRQVAKIRKKAIAHIMIHCPTDPFDIRLSLATES PTDDVPQGVCRTRRKDRISYLYDGFRADLTKVSGSSMSSELEMEADSHKLIGYFTDRNDP HNMDKVEELLQILLDSMRYVNRRLKA*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0F07865p