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Element type: CDS
Element length: 1374 nucleotides,
on anti-sense strand of
Yali0E: complement(4213549..4214922).
Other names:
YALI-CDS2732.1
YALI-IPF4499
Coding sequence: 458 codons.
Element length: 1374 nucleotides,
on anti-sense strand of
Yali0E: complement(4213549..4214922).
Other names:
YALI-CDS2732.1
YALI-IPF4499
Coding sequence: 458 codons.
Database cross references:
EMBL: CR382131
GeneID: 2912348
HOGENOM: Q6C3F9
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382131
GeneID: 2912348
HOGENOM: Q6C3F9
Homologs and Orthologs
Homologs in protein families: GL3C0576 GL3C0576.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0E35222p 
Protein domain map
Database cross references:
InterPro: IPR007312
KEGG: yli:YALI0E35222g
Pfam: PF04185
RefSeq: XP_504803.1
UniProtKB/TrEMBL: Q6C3F9
UniprotKB: Q6C3F9_YARLI
InterPro: IPR007312
KEGG: yli:YALI0E35222g
Pfam: PF04185
RefSeq: XP_504803.1
UniProtKB/TrEMBL: Q6C3F9
UniprotKB: Q6C3F9_YARLI
Sequence data
>YALI0E35222g.nt ATATGAGTTTCAATGCACGCAGATATCACAGTGAGATGTTTCTCCTTCGAGAAATAGTTT TACTTTCCACTACTGTATCGATGGTTGGTTAATACACCTCTTATACTACAGTACATGCTG TAAACTACGATTACGACCAGTACTATCCATTCTGTTTGTAGCATTGTTCACCAGCTCTCT CTTATTGTATATAATTGCTGTTTAAATGCTTCCATTTTGTACTTGATACTATAAAGTACA CTGTACAGTATGTACCGTAGTTCGAAGCAGCAGCCATTTCGACTGAGGTTTTGAGGAGAA GACCTGCAGATGTAGTCTTGTGCAGTAGCTACAAGTAGCTTTCTACATCGTACAGGTTTG GGTCCCAACAGCTACAAACTCTCATGTGTGCCGCTCGTCTTATACGGCTTGTTTCGGCCA ACGTTGTCCTAAAATTTCCCGATCTTCCGTGGCTGGCGGCTTCACCGGGGCGCATATCTT GTCTCACATCGAATGCTTATCTCCATTAGAACCAATCAAAGGTCCCAACCTAACCATGAC CTCCCAAAAGGAAATGAACACTAAGTAGGCCAAGCTTTTTCAAGGTTAACTTCGACCTCC ACACGACGCAAGTGACGCCTCTTGGCGACATCTTTTATGTAATTAAATGACAAGGACTCA CATTGGGGGACAAGCGAGCACTCGGCTCCAGGTGATTATCATACCTTGAAAGTAATATTT ATTGCACTTTTATGGAGCAGTTCCGATAGCCGCTACGAACGCACCCACTTCTACCTTGGT TTACCTCCGAACTCTTCTCGACCAATGAGGGTGAATGTAAATAACCCCCAAGTAATAAGA TTCAATAACCAAAACTCTCCGAACCCAGATCGTAATGACGAGATCCACAGATAGTTCTTG AAACACGTGGTACGTGACTCGCGAAATTGCCGTCCCTTCAGCATGTATATAAACTCCACA GTGTCCGGTTTCCGGAGTTCAAGCAACAACTACACTCGCTATGCTCTTTGCACCTATCAC CCTCCTGGCCATTGTCGCTGGTGTGTCTGCCCAGACCACCGCCCATAACGACTTCAGCGC CTACGATGAGATTGTTTCCAAGGCCACCCGAACACCCAAGTTCTCCACCATCAATCCTGC TGCCACTGATATCGCCAAGGCTGCCGAGACTGCCGCTGTCAACTCCTTCAAGGACAAGCC TCTCGTTAAGGGTAAGGCCTTTGATAAGTTCTACCAGGTGTGGCTCGAGAACACTGACAA GTGGAAGGCTCGGGACGAGCCCGGTCTCGTTGAGCTCCAGAAGCAGGGTATCACTCTGAC CAACTACTGGGGTCTCACTCACCCCTCTGAGCCCAACTATGTTGGTGTTGTCGGTGGTGA CTACTTTGGTATCTTTGATGATGCCTTCCTCCGAATCCCTGAGAATGTGTCCACTGTTGT CGATCTGCTCGACTCCAAGAACATCTCTTGGGCCGAGTACCAAGAACACCAGCCCCATGC CGGCTTCGAGGGTTTCAATTACTCTCGACAGTCCGATTACGCCAACGATTACGTCCGAAA GCACAACCCTCTCATTATCTACGACTCCGTTGTGTCCAACCCTCACAACCTCGGTTACAT CAAGAACTACACTGAGTTCAACAAGGACCTAAAGAACAAGGATCTTCCCCAATGGGCCTT CTTCACCCCCAACATGACCAACGATGGTCACGATACCGATATTTCTGTTTCGGGTCGGTA CGTTACCAACTGGGTCAAGCCTCTGCTCAACAACACCGAGTTCGCCAAGGACAGTCTCAT CATCATCACGTTCGATGAGAACGAGACCTACAAGGACCAGAACTCGGTCCTCGCTATTCT TCTTGGTGGTGCCGTCCCCGACCATCTGCGAGGTACCACTGACGATACATTCTACGACCA CTACTCCAACCTCGCCACCGTCGAGGCCAATTGGGAGCTCCCCCATCTTGGACGTGGCGA TGTTAATGCCAACGTCTTCAAGTTTGTCGCCGATGAGCTCAACATCAAGAACCGAAACAT TTCCACTGAGGGTTTGTACCATAACGCCTCTCAGCCTGGTTACTTTATGGACGACACCGT CCCTATCCCGGTCCCTGACCTGACTGCCGTTGGTATTTCCGGTAACAAGATTCTGCCCAA GATCGCCGAGATCTGGGGCAAGGCTGCTGAGAAGAACTCTACTGTCGCCTACCCTAACTC CACTGCGTCCGCTACTTCCGGCGCTGGCGTCGCCGTTGCCGGAGTCAACCACACCTCTCC CAGCGTTGTTCCCTCCAAGAACACCAATGGAGCCACCCTCATTACTCTTTCTGGAGCTGC TCTTGTTGGTGCCATCGGTGCTCTTCTTCTCTAACCTGTCTGACACGAGTCAACTCTTTT GTATCTAATAAAAGTTTTTAATTTTACAGTGATGTGTCCTACGACGATTATAATACGACT TCTCGTACCATACACAGGTACTGTTGGCTTTTTTTCTTGAATAATGTATTGAACTGTAGA AAAATTACTTGTACTATCAACCACACCCAAGGGTGGGGGCAACTCAGAGTAGAAGTTTAA ATCCCACGTTTACAAAGCACGTGTGGATAACGCACGATTACGAGCTTTTGCGACCCCTGC ACGACGTATATATGTTCCGACCCCTCTACTCTAA
>YALI0E35222g.cds ATGCTCTTTGCACCTATCACCCTCCTGGCCATTGTCGCTGGTGTGTCTGCCCAGACCACC GCCCATAACGACTTCAGCGCCTACGATGAGATTGTTTCCAAGGCCACCCGAACACCCAAG TTCTCCACCATCAATCCTGCTGCCACTGATATCGCCAAGGCTGCCGAGACTGCCGCTGTC AACTCCTTCAAGGACAAGCCTCTCGTTAAGGGTAAGGCCTTTGATAAGTTCTACCAGGTG TGGCTCGAGAACACTGACAAGTGGAAGGCTCGGGACGAGCCCGGTCTCGTTGAGCTCCAG AAGCAGGGTATCACTCTGACCAACTACTGGGGTCTCACTCACCCCTCTGAGCCCAACTAT GTTGGTGTTGTCGGTGGTGACTACTTTGGTATCTTTGATGATGCCTTCCTCCGAATCCCT GAGAATGTGTCCACTGTTGTCGATCTGCTCGACTCCAAGAACATCTCTTGGGCCGAGTAC CAAGAACACCAGCCCCATGCCGGCTTCGAGGGTTTCAATTACTCTCGACAGTCCGATTAC GCCAACGATTACGTCCGAAAGCACAACCCTCTCATTATCTACGACTCCGTTGTGTCCAAC CCTCACAACCTCGGTTACATCAAGAACTACACTGAGTTCAACAAGGACCTAAAGAACAAG GATCTTCCCCAATGGGCCTTCTTCACCCCCAACATGACCAACGATGGTCACGATACCGAT ATTTCTGTTTCGGGTCGGTACGTTACCAACTGGGTCAAGCCTCTGCTCAACAACACCGAG TTCGCCAAGGACAGTCTCATCATCATCACGTTCGATGAGAACGAGACCTACAAGGACCAG AACTCGGTCCTCGCTATTCTTCTTGGTGGTGCCGTCCCCGACCATCTGCGAGGTACCACT GACGATACATTCTACGACCACTACTCCAACCTCGCCACCGTCGAGGCCAATTGGGAGCTC CCCCATCTTGGACGTGGCGATGTTAATGCCAACGTCTTCAAGTTTGTCGCCGATGAGCTC AACATCAAGAACCGAAACATTTCCACTGAGGGTTTGTACCATAACGCCTCTCAGCCTGGT TACTTTATGGACGACACCGTCCCTATCCCGGTCCCTGACCTGACTGCCGTTGGTATTTCC GGTAACAAGATTCTGCCCAAGATCGCCGAGATCTGGGGCAAGGCTGCTGAGAAGAACTCT ACTGTCGCCTACCCTAACTCCACTGCGTCCGCTACTTCCGGCGCTGGCGTCGCCGTTGCC GGAGTCAACCACACCTCTCCCAGCGTTGTTCCCTCCAAGAACACCAATGGAGCCACCCTC ATTACTCTTTCTGGAGCTGCTCTTGTTGGTGCCATCGGTGCTCTTCTTCTCTAA
>YALI0E35222g.aa MLFAPITLLAIVAGVSAQTTAHNDFSAYDEIVSKATRTPKFSTINPAATDIAKAAETAAV NSFKDKPLVKGKAFDKFYQVWLENTDKWKARDEPGLVELQKQGITLTNYWGLTHPSEPNY VGVVGGDYFGIFDDAFLRIPENVSTVVDLLDSKNISWAEYQEHQPHAGFEGFNYSRQSDY ANDYVRKHNPLIIYDSVVSNPHNLGYIKNYTEFNKDLKNKDLPQWAFFTPNMTNDGHDTD ISVSGRYVTNWVKPLLNNTEFAKDSLIIITFDENETYKDQNSVLAILLGGAVPDHLRGTT DDTFYDHYSNLATVEANWELPHLGRGDVNANVFKFVADELNIKNRNISTEGLYHNASQPG YFMDDTVPIPVPDLTAVGISGNKILPKIAEIWGKAAEKNSTVAYPNSTASATSGAGVAVA GVNHTSPSVVPSKNTNGATLITLSGAALVGAIGALLL*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0E35222p