YALI0E35222g


similar to uniprot|P08540 Kluyveromyces lactis Potential acid phosphatase (EC 3.1.3.2)

Genomic environment map

Element type: CDS
Element length: 1374 nucleotides,
on anti-sense strand of
Yali0E: complement(4213549..4214922).
Other names:
YALI-CDS2732.1
YALI-IPF4499
Coding sequence: 458 codons.
Database cross references:
EMBL: CR382131
GeneID: 2912348
GenomeReviews: CR382131_GR
HOGENOM: HBG736259

Computed results  

None available yet


Homologs and Orthologs

Homologs in protein family: GL3C0576
Orthologs: strict determination not possible; homologs must be refined manually

Protein YALI0E35222p  


similar to uniprot|P08540 Kluyveromyces lactis Potential acid phosphatase (EC 3.1.3.2); SubName: Full=YALI0E35222p;

Protein domain map

Protein length: 457 amino acids
Protein family: GL3C0576
Database cross references:
InterPro: IPR007312
KEGG: yli:YALI0E35222g
Pfam: PF04185
RefSeq: XP_504803.1
UniProtKB/TrEMBL: Q6C3F9
UniProtKB: Q6C3F9_YARLI

Phylogeny  

PhylomeDB:YALI0E35222g

Computed results for YALI0E35222p  

Blastp Genolevures
Blastp Uniprot

Gene Ontology terms  


Sequence data  


Nucleotide sequence    

>YALI0E35222g.nt
ATGCTCTTTGCACCTATCACCCTCCTGGCCATTGTCGCTGGTGTGTCTGCCCAGACCACC
GCCCATAACGACTTCAGCGCCTACGATGAGATTGTTTCCAAGGCCACCCGAACACCCAAG
TTCTCCACCATCAATCCTGCTGCCACTGATATCGCCAAGGCTGCCGAGACTGCCGCTGTC
AACTCCTTCAAGGACAAGCCTCTCGTTAAGGGTAAGGCCTTTGATAAGTTCTACCAGGTG
TGGCTCGAGAACACTGACAAGTGGAAGGCTCGGGACGAGCCCGGTCTCGTTGAGCTCCAG
AAGCAGGGTATCACTCTGACCAACTACTGGGGTCTCACTCACCCCTCTGAGCCCAACTAT
GTTGGTGTTGTCGGTGGTGACTACTTTGGTATCTTTGATGATGCCTTCCTCCGAATCCCT
GAGAATGTGTCCACTGTTGTCGATCTGCTCGACTCCAAGAACATCTCTTGGGCCGAGTAC
CAAGAACACCAGCCCCATGCCGGCTTCGAGGGTTTCAATTACTCTCGACAGTCCGATTAC
GCCAACGATTACGTCCGAAAGCACAACCCTCTCATTATCTACGACTCCGTTGTGTCCAAC
CCTCACAACCTCGGTTACATCAAGAACTACACTGAGTTCAACAAGGACCTAAAGAACAAG
GATCTTCCCCAATGGGCCTTCTTCACCCCCAACATGACCAACGATGGTCACGATACCGAT
ATTTCTGTTTCGGGTCGGTACGTTACCAACTGGGTCAAGCCTCTGCTCAACAACACCGAG
TTCGCCAAGGACAGTCTCATCATCATCACGTTCGATGAGAACGAGACCTACAAGGACCAG
AACTCGGTCCTCGCTATTCTTCTTGGTGGTGCCGTCCCCGACCATCTGCGAGGTACCACT
GACGATACATTCTACGACCACTACTCCAACCTCGCCACCGTCGAGGCCAATTGGGAGCTC
CCCCATCTTGGACGTGGCGATGTTAATGCCAACGTCTTCAAGTTTGTCGCCGATGAGCTC
AACATCAAGAACCGAAACATTTCCACTGAGGGTTTGTACCATAACGCCTCTCAGCCTGGT
TACTTTATGGACGACACCGTCCCTATCCCGGTCCCTGACCTGACTGCCGTTGGTATTTCC
GGTAACAAGATTCTGCCCAAGATCGCCGAGATCTGGGGCAAGGCTGCTGAGAAGAACTCT
ACTGTCGCCTACCCTAACTCCACTGCGTCCGCTACTTCCGGCGCTGGCGTCGCCGTTGCC
GGAGTCAACCACACCTCTCCCAGCGTTGTTCCCTCCAAGAACACCAATGGAGCCACCCTC
ATTACTCTTTCTGGAGCTGCTCTTGTTGGTGCCATCGGTGCTCTTCTTCTCTAA

Coding sequence    

>YALI0E35222g.cds
ATGCTCTTTGCACCTATCACCCTCCTGGCCATTGTCGCTGGTGTGTCTGCCCAGACCACC
GCCCATAACGACTTCAGCGCCTACGATGAGATTGTTTCCAAGGCCACCCGAACACCCAAG
TTCTCCACCATCAATCCTGCTGCCACTGATATCGCCAAGGCTGCCGAGACTGCCGCTGTC
AACTCCTTCAAGGACAAGCCTCTCGTTAAGGGTAAGGCCTTTGATAAGTTCTACCAGGTG
TGGCTCGAGAACACTGACAAGTGGAAGGCTCGGGACGAGCCCGGTCTCGTTGAGCTCCAG
AAGCAGGGTATCACTCTGACCAACTACTGGGGTCTCACTCACCCCTCTGAGCCCAACTAT
GTTGGTGTTGTCGGTGGTGACTACTTTGGTATCTTTGATGATGCCTTCCTCCGAATCCCT
GAGAATGTGTCCACTGTTGTCGATCTGCTCGACTCCAAGAACATCTCTTGGGCCGAGTAC
CAAGAACACCAGCCCCATGCCGGCTTCGAGGGTTTCAATTACTCTCGACAGTCCGATTAC
GCCAACGATTACGTCCGAAAGCACAACCCTCTCATTATCTACGACTCCGTTGTGTCCAAC
CCTCACAACCTCGGTTACATCAAGAACTACACTGAGTTCAACAAGGACCTAAAGAACAAG
GATCTTCCCCAATGGGCCTTCTTCACCCCCAACATGACCAACGATGGTCACGATACCGAT
ATTTCTGTTTCGGGTCGGTACGTTACCAACTGGGTCAAGCCTCTGCTCAACAACACCGAG
TTCGCCAAGGACAGTCTCATCATCATCACGTTCGATGAGAACGAGACCTACAAGGACCAG
AACTCGGTCCTCGCTATTCTTCTTGGTGGTGCCGTCCCCGACCATCTGCGAGGTACCACT
GACGATACATTCTACGACCACTACTCCAACCTCGCCACCGTCGAGGCCAATTGGGAGCTC
CCCCATCTTGGACGTGGCGATGTTAATGCCAACGTCTTCAAGTTTGTCGCCGATGAGCTC
AACATCAAGAACCGAAACATTTCCACTGAGGGTTTGTACCATAACGCCTCTCAGCCTGGT
TACTTTATGGACGACACCGTCCCTATCCCGGTCCCTGACCTGACTGCCGTTGGTATTTCC
GGTAACAAGATTCTGCCCAAGATCGCCGAGATCTGGGGCAAGGCTGCTGAGAAGAACTCT
ACTGTCGCCTACCCTAACTCCACTGCGTCCGCTACTTCCGGCGCTGGCGTCGCCGTTGCC
GGAGTCAACCACACCTCTCCCAGCGTTGTTCCCTCCAAGAACACCAATGGAGCCACCCTC
ATTACTCTTTCTGGAGCTGCTCTTGTTGGTGCCATCGGTGCTCTTCTTCTCTAA

Predicted translation product    

>YALI0E35222g.aa
MLFAPITLLAIVAGVSAQTTAHNDFSAYDEIVSKATRTPKFSTINPAATDIAKAAETAAV
NSFKDKPLVKGKAFDKFYQVWLENTDKWKARDEPGLVELQKQGITLTNYWGLTHPSEPNY
VGVVGGDYFGIFDDAFLRIPENVSTVVDLLDSKNISWAEYQEHQPHAGFEGFNYSRQSDY
ANDYVRKHNPLIIYDSVVSNPHNLGYIKNYTEFNKDLKNKDLPQWAFFTPNMTNDGHDTD
ISVSGRYVTNWVKPLLNNTEFAKDSLIIITFDENETYKDQNSVLAILLGGAVPDHLRGTT
DDTFYDHYSNLATVEANWELPHLGRGDVNANVFKFVADELNIKNRNISTEGLYHNASQPG
YFMDDTVPIPVPDLTAVGISGNKILPKIAEIWGKAAEKNSTVAYPNSTASATSGAGVAVA
GVNHTSPSVVPSKNTNGATLITLSGAALVGAIGALLL*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites