HomeYALI0E34133g
similar to uniprot|P16661 Saccharomyces cerevisiae YBR110w ALG1 Mannosyltransferase, involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER)
Element type: CDS
Element length: 1392 nucleotides,
on sense strand of
Yali0E: 4053853..4055244.
Other names:
YALI-CDS2666.1
YALI-IPF3868
Coding sequence: 464 codons.
Element length: 1392 nucleotides,
on sense strand of
Yali0E: 4053853..4055244.
Other names:
YALI-CDS2666.1
YALI-IPF3868
Coding sequence: 464 codons.
Database cross references:
EMBL: CR382131
GeneID: 2911951
HOGENOM: Q6C3K2
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382131
GeneID: 2911951
HOGENOM: Q6C3K2
Homologs and Orthologs
Homologs in protein families: GL3R2097 GL3R2097.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0E34133p 
similar to uniprot|P16661 Saccharomyces cerevisiae YBR110w ALG1 beta-mannosyltransferase singleton
Protein domain map
Database cross references:
InterPro: IPR001296
KEGG: yli:YALI0E34133g
Pfam: PF00534
RefSeq: XP_504760.1
UniProtKB/Swiss-Prot: Q6C3K2
UniprotKB: ALG1_YARLI
InterPro: IPR001296
KEGG: yli:YALI0E34133g
Pfam: PF00534
RefSeq: XP_504760.1
UniProtKB/Swiss-Prot: Q6C3K2
UniprotKB: ALG1_YARLI
Sequence data
Nucleotide sequence
>YALI0E34133g.nt TAGGGTCCCACGTGCGCGCGAGAATGAGCCAGAATTATCCCGACATCATGTAATAGTAGA ACTCACCAGCAGCTGAACAAACTCGTTGTAGTCGATTCGGCCATCACCGTTGGCATCAGC CTCCTTGATCATCATATCAACCTCCTCATCGGTGAGCTTCTCACCAATGGAGGTCATGAC GTGTCGGAGCTCCTGGGCGGAGATGAAGCCGTTGTTATCCCGGTCAAAGACCTTGAATGC CTCTCTGATTTCCTCCTCGGAGTCGGTATCCTTCATCTTTCGAGCCATCATGGTGAGGAA CTCGGCGAAGTCAATGGTGCCGTCGTTGTTGGCGTCGACCTCGTTGATCATGTCGGCGAG CTCGGACTCGCTGGGGTTCTGGCCCAGACTTCGCATCACGGTACCAAGCTCCTTGGTGGT GATTTTACCGTCATTGTTCTTGTCAAACAGGGAGAAAGCCTCTCGGAATTCGGCAACCTG GTCTTCGGTCAGCTGGTCAGACATCTTGGTTAGCATTGCGGTTCGGTCGAGGGTATTTTC GATCGAGGGAATGAACGTGACGCAACCGGATTGTCTCGTCTTTTTAAGGGATGCTTGTAT GCCACGTGTCAGAGGGTGTTTCTTGGGAGAGACCCGCACTAGCACGTGGCACAATAAAAG CAGGCCCTCACTTCCGAGTGCAGAATATTATCACGTAAGGGTTACCCCTGCTTTTTCTCG TCGTCATCGTACTTACCTTTGGTGTGTTGTGGTGTGTAGAGAAAGAGTAATTTGGATTCG GGGAGTTAGTTTAGTTTGCGTTCGCCACGGTGGAGAGTAAATAGAGCCAGGTTGGGAGTC GAACTGCGGAGCGTTAGGGTTATGCCACAGCACCCAAGCGCTGGGTACTGAACTGGAGCA AGACACTCGAAACAAAGTTTGTCTTGCAGATGACATACCTGGAAAGCGTGCATGCCAACA GCTCAACAATAGATCCACCAAACGTCCACCTAAACGAAATATGAAGGCCTGGCACTGGTC TGTCACCCTTGTGGTAATCTACCTGGCAATTCCAGTCATTCTCTATTTGCTCACCCGAAA AGATGACCGAAAACCGCTCAGTGACATTCGAAAACGGAAGAGAACCATTGTGCTGGTCCT CGGAGACCTAGGTCGATCTCCTCGAATGCTCTACCACGCTCGGTCTCTGGCACGAAGCGG ACACAAAGTTGACCTGTGCGGATACGACGGCGCAAAGCCCTTCGACGAGATCCTCAACAA TGATCTCATCAAGATCCACCACATTCCTTTGATCCTCAACACACGCAAACTGCCATTTGT CGTGTTTGGCATTCTCAAGGTTATCCGACAGCACTGGCTGTTGATTTCTCTGCTCTACAA ACTGCGAGGCGCTGACTACCTACTCGTGCAGAACCCTCCCTCAATCCCTACCCTTGGAGT TGTAAGGTTCTACAACCTGTTCCTAAGCACTCGAACCAAGGTCGTTCTGGACTGGCACAA CTTTGGCTACACCATCTTGGCTCTCAAGCTGCCCGAGACTCACCCAATGGTCAAGTTTGC TAAGTTCTACGAGGGTTTCTTTGGAGGTAGAGCCTTTGTTCATCTGTGTGTGACTGTTCT AATGGGTCAGGCTATGCGAAAGACATTTGGAATGAGTGGACGACGAATTGTGCCCTTGCA CGACCGACCTGCTTTCCACTTCAAGCCTCTCAGCGAATCTGAGAAGCTCGATGTGCTCAG AGACTTTAAGGAGACTCTCTATGACGACATGACCGCTGATCACAAGATTATCGTGTCCAG TACATCGTACACTCCCGACGAGAACTTCAACATTCTCCTCGACGCTCTGGCTCTCTACGA CGAATCCAAACTCGACCTCCCTCCTCTCCGTGTCATCATAACTGGAAAGGGACCCATGAT GCCCGAGTTCTTGGCCAAGGTGGAAAAGCTGCAGTTAAAGAGAGTGTCCATTCGAACCGC CTGGCTCGAGTTTGCCGACTACCCTCGAATTCTGGGCGCTGCCCACCTCGGAGTGTCTCT CCATGAGTCTTCTTCAGGCTATGATCTGCCCATGAAGGTCGTTGATATGTTTGGATGTGG CATTCCTGTGGTGTCTGTGGACTACGCTGCTCTTTCTGAGCTGGTCAAGACCAACACCAA CGGTGTGGCTGTCAAGGGCCACGTGGAGATGGGCAACACTTTCATGTCCTTGTTTTCCAA CCGTGGAAAACTTGACAACATCAAGCGAGGAGCTATGATCGAGTCTCGAAACACCTGGGA CCAGACCTGGGTCAAGACTGTGGGTCCTCTTTTCGACATCGGAGAGTACGTTCAACAGAG ACCAGATGAGGATTACGACTTCAGCAGTAGCAGCAGCGACGACGACCACTAATAACGATA CGAAAAGAGAAGGTGAGAAAAGGATAAAAGAGATGGACATTGATCCACACTACATATAAC TGAATGCATTTTTATTGTACCACATAGGACCATTATAATGGGGGCATAAACAAGCAATTG TTACCCACCTCATAAAAGGGAGGCTTGATAAGCCAAAGCATCATGGTACAGTTGGACTTC ATATCTGTCTACATACAAGTACCGCTGCAACTGTTCTCCAACAGTTCAAACAGACGCTGT GACGTCATAGATCTGCAAATTTCAACGGAGAATACAATCTGAAACGCCACAA
Coding sequence
>YALI0E34133g.cds ATGAAGGCCTGGCACTGGTCTGTCACCCTTGTGGTAATCTACCTGGCAATTCCAGTCATT CTCTATTTGCTCACCCGAAAAGATGACCGAAAACCGCTCAGTGACATTCGAAAACGGAAG AGAACCATTGTGCTGGTCCTCGGAGACCTAGGTCGATCTCCTCGAATGCTCTACCACGCT CGGTCTCTGGCACGAAGCGGACACAAAGTTGACCTGTGCGGATACGACGGCGCAAAGCCC TTCGACGAGATCCTCAACAATGATCTCATCAAGATCCACCACATTCCTTTGATCCTCAAC ACACGCAAACTGCCATTTGTCGTGTTTGGCATTCTCAAGGTTATCCGACAGCACTGGCTG TTGATTTCTCTGCTCTACAAACTGCGAGGCGCTGACTACCTACTCGTGCAGAACCCTCCC TCAATCCCTACCCTTGGAGTTGTAAGGTTCTACAACCTGTTCCTAAGCACTCGAACCAAG GTCGTTCTGGACTGGCACAACTTTGGCTACACCATCTTGGCTCTCAAGCTGCCCGAGACT CACCCAATGGTCAAGTTTGCTAAGTTCTACGAGGGTTTCTTTGGAGGTAGAGCCTTTGTT CATCTGTGTGTGACTGTTCTAATGGGTCAGGCTATGCGAAAGACATTTGGAATGAGTGGA CGACGAATTGTGCCCTTGCACGACCGACCTGCTTTCCACTTCAAGCCTCTCAGCGAATCT GAGAAGCTCGATGTGCTCAGAGACTTTAAGGAGACTCTCTATGACGACATGACCGCTGAT CACAAGATTATCGTGTCCAGTACATCGTACACTCCCGACGAGAACTTCAACATTCTCCTC GACGCTCTGGCTCTCTACGACGAATCCAAACTCGACCTCCCTCCTCTCCGTGTCATCATA ACTGGAAAGGGACCCATGATGCCCGAGTTCTTGGCCAAGGTGGAAAAGCTGCAGTTAAAG AGAGTGTCCATTCGAACCGCCTGGCTCGAGTTTGCCGACTACCCTCGAATTCTGGGCGCT GCCCACCTCGGAGTGTCTCTCCATGAGTCTTCTTCAGGCTATGATCTGCCCATGAAGGTC GTTGATATGTTTGGATGTGGCATTCCTGTGGTGTCTGTGGACTACGCTGCTCTTTCTGAG CTGGTCAAGACCAACACCAACGGTGTGGCTGTCAAGGGCCACGTGGAGATGGGCAACACT TTCATGTCCTTGTTTTCCAACCGTGGAAAACTTGACAACATCAAGCGAGGAGCTATGATC GAGTCTCGAAACACCTGGGACCAGACCTGGGTCAAGACTGTGGGTCCTCTTTTCGACATC GGAGAGTACGTTCAACAGAGACCAGATGAGGATTACGACTTCAGCAGTAGCAGCAGCGAC GACGACCACTAA
Predicted translation product
>YALI0E34133g.aa MKAWHWSVTLVVIYLAIPVILYLLTRKDDRKPLSDIRKRKRTIVLVLGDLGRSPRMLYHA RSLARSGHKVDLCGYDGAKPFDEILNNDLIKIHHIPLILNTRKLPFVVFGILKVIRQHWL LISLLYKLRGADYLLVQNPPSIPTLGVVRFYNLFLSTRTKVVLDWHNFGYTILALKLPET HPMVKFAKFYEGFFGGRAFVHLCVTVLMGQAMRKTFGMSGRRIVPLHDRPAFHFKPLSES EKLDVLRDFKETLYDDMTADHKIIVSSTSYTPDENFNILLDALALYDESKLDLPPLRVII TGKGPMMPEFLAKVEKLQLKRVSIRTAWLEFADYPRILGAAHLGVSLHESSSGYDLPMKV VDMFGCGIPVVSVDYAALSELVKTNTNGVAVKGHVEMGNTFMSLFSNRGKLDNIKRGAMI ESRNTWDQTWVKTVGPLFDIGEYVQQRPDEDYDFSSSSSDDDH*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0E34133g