YALI0E32835g

uniprot|O74934 Yarrowia lipolytica YALI0E32835g POX1 Acyl-CoA oxidase 1 (EC 1.3.3.6), peroxisomal, specific toward dicarboxilic acid

Genomic environment map

Element type: CDS
Element length: 2034 nucleotides,
on sense strand of
Yali0E: 3897102..3899135.
Other names:
YALI-CDS1242.1
YALI-IPF2836
Coding sequence: 678 codons.

Database cross references:
EMBL: AJ001299
EMBL: CR382131
GeneID: 2912003
HOGENOM: O74934

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3C0456
Consensus family of 16 members, scrltkgdy (1 1 1 1 1 1 1 3 6)
16-member family, phyletic pattern sczltkgdy, profile (1 1 1 1 1 1 1 3 6)
Proteins: SACE0G01364p CAGL0A03740p ZYRO0E08338p SAKL0F02068p KLTH0G01914p KLLA0F09933p ERGO0E16500p DEHA2C01078p DEHA2D17204p DEHA2D17248p YALI0C23859p YALI0D24750p YALI0E06567p YALI0E27654p YALI0E32835p YALI0F10857p
Search in: Génolevures Google

Génolevures family GL3C0456.N1
Nine-SONS subgroup of a Consensus family
12-member family, phyletic pattern sczltkgdy, profile (1 1 1 1 1 1 1 2 3)
Proteins: SACE0G01364p CAGL0A03740p ZYRO0E08338p SAKL0F02068p KLTH0G01914p KLLA0F09933p ERGO0E16500p DEHA2D17204p DEHA2D17248p YALI0D24750p YALI0E27654p YALI0E32835p
Search in: Génolevures Google

Homologs in protein families: GL3C0456 GL3C0456.N1
Orthologs: strict determination not possible; homologs must be refined manually

Protein YALI0E32835p

uniprot|O74934 Yarrowia lipolytica POX1 Acyl-CoA oxidase 1 (EC 1.3.3.6), peroxisomal, specific toward dicarboxilic acid

Protein domain map

Protein length: 677 amino acids
Protein family: GL3C0456

Database cross references:
Gene3D: G3DSA:1.10.540.10
Gene3D: G3DSA:1.20.140.10
Gene3D: G3DSA:2.40.110.10
HSSP: P07872
InterPro: IPR002655
InterPro: IPR006090
InterPro: IPR006091
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
KEGG: yli:YALI0E32835g
PANTHER: PTHR10909:SF11
PIRSF: PIRSF000168
Pfam: PF00441
Pfam: PF01756
Pfam: PF02770
RefSeq: XP_504703.1
UniProtKB/Swiss-Prot: O74934
UniprotKB: ACOX1_YARLI

Computed results for YALI0E32835p

Blastp Genolevures

Blastp Uniprot

Gene Ontology terms

None available yet

Sequence data

>YALI0E32835g.nt
TGAGTATAATCCGTCTCCGTTCCCACTTGAGGGGAGGACTTTGGACGGGTTTCGGTGCAA
CCTCGTCAGGTGAATAATCATGATTCATTTGCGTGATCTGGCTGGGACAAAATACAAGTG
CTTGTATATGGTATACCAGGAGGACCACTTATGAGAATGCCAAAGAAAATTGAAGGGGAA
AATAAATGCTGCCACCCGATACTCGAAATATACCATTGGACGTGTTTTCCACATAGGTAA
TCGCCACTCCATACCCGAGATCTGAAGTGAAACATTCGTGTTCTGTAGCCGTTAGCCCAC
CCCCACACACTGAGACACTCGGCTGATGTTTCGAAATTCATGCTACTGTACGGTACGGAC
TTAACACTTATCCCCATTGTCCTGGGACTACTACATTGTAGTATACTCTACACATCCAAC
AAGCAATACTTTTTCGTACAAGTAGGTAGTTGTGCGAGTACTCGTACAATGGAAAAACAT
TATACATGAAGCAGGGCGTGCGTCGGTCTGTAGGGTGAAATAGGGAGCCGACAGTGCATT
TCCAGCATTCTAGATTGATCTGAATCAATAATTTGTGGGGGAAATTGGCACTAGTGCTTT
GTTTATTAGCTATTTGACAGTCTGATGATGAGAAAGTCGTTCTTCGGCTTAGCCCAACCC
CACACTCACTACGCACCTGGCACAGGGTGGTGCATATAATATGCAAGTACGGAGATGTAC
TAACGCTAGCCAGGAGAGAGTGACGAAACGTAGCCATCCGTTGAGCGGGCAGACGTGGGA
GTAATATAGTCGTTTAGGGCACGTGATTGCGACCCCAGTGGTATCATCTTTGTCTCCCAA
ACTCTTCGTAATGCCCACCCAGGACGATCCTCTCTGAACTTTACTACCCCACATTCCCGA
GACTATAAAGTATAGACGGCTCCTACAAAAGAGAGCAGGTGGAATAACACACTATTGACC
GACAATGACAACCAACACATTCACCGATCCTCCTGTGGAGATGGCCAAGGAGCGAGGTAA
GACTCAATTCACTGTCCGAGATGTGACCAACTTCCTCAATGGTGGAGAAGAAGAGACCCA
GATTGTCGAGAAGATCATGAGCAGTATTGAACGTGATCCAGTACTGTCTGTCACTGCTGA
CTACGACTGCAACCTTCAGCAGGCCCGAAAACAGACCATGGAGCGGGTGGCTGCTCTGTC
GCCTTATCTGGTCACCGATACTGAGAAGCTATCTCTGTGGCGTGCGCAACTGCATGGAAT
GGTTGATATGTCTACTCGTACGCGGTTGTCGATCCACAACAACCTGTTCATTGGTTCCAT
CAGGGGATCTGGTACTCCTGAACAGTTCAAGTACTGGGTCAAGAAGGGAGCGGTGGCTGT
TAAGCAGTTCTATGGATGCTTTGCCATGACAGAGTTGGGCCATGGAAGCAACCTCAAGGG
ACTAGAGACAACCGCCACTTATGACCAGGACAGTGACCAGTTCATTATCAACACTCCTCA
TATTGGTGCTACCAAGTGGTGGATTGGCGGTGCAGCCCACACTTCCACCCATTGTGTTTG
TTTCGCGAAACTGATTGTGCATGGCAAGGACTATGGTACTCGAAACTTTGTGGTACCTCT
CCGAAATGTCCACGATCACAGTCTCAAGGTCGGTGTTTCAATTGGAGACATTGGAAAGAA
GATGGGCAGAGATGGTGTTGACAATGGCTGGATCCAGTTCACCAATGTTCGAATCCCCAG
ACAGAACATGCTAATGAGATATGCCAAGGTGTCTGATACTGGAGTGGTAACCAAACCCGC
TCTTGACCAACTCACTTATGGAGCCCTCATTCGAGGTCGAGTGTCCATGATTGCCGACTC
GTTCCACGTCTCCAAACGATTCCTCACAATTGCTCTTCGGTACGCTTGTGTCCGACGACA
GTTTGGAACCTCTGGAGACACTAAGGAGACCAAGATCATCGACTACCCTTACCACCAGCG
ACGATTGCTGCCTCTTCTGGCCTACTGCTACGCTATGAAGATGGGTGCTGATGAGGCTCA
GAAGACTTGGATTGAGACCACCGATCGAATTCTGGCTCTCAATCCCAACGACCCCGCCCA
GAAGAACGATCTGGAGAAGGCCGTCACCGACACAAAGGAGCTGTTTGCTGCGTCTGCAGG
AATGAAGGCATTTACCACGTGGGGATGTGCCAAAATCATTGATGAGTGCCGACAGGCCTG
TGGAGGTCATGGATACTCTGGATATAACGGATTTGGCCAGGGCTACGCTGACTGGGTTGT
CCAGTGTACCTGGGAAGGAGACAACAACGTTCTGTGTCTGTCAATGGGCCGAGGGCTGGT
TCAGTCAGCTCTACAGATTTTGGCTGGAAAGCACGTCGGTGCTTCTATTCAGTACGTAGG
AGACAAGTCTAAAATCTCCCAGAACGGCCAGGGTACCCCCAGAGAGCAACTTCTGTCCCC
CGAGTTTCTAGTAGAAGCTTTCAGAACGGCTTCTCGAAACAACATTCTCAGAACCACCGA
TAAATACCAAGAGCTTGTCAAAACTCTCAATCCCGACCAGGCCTTTGAGGAGCTGTCTCA
GCAGAGATTCCAGTGTGCTCGAATCCACACACGACAGCATCTTATCTCTTCATTCTATGC
CCGAATTGCCACTGCCAAAGACGATATCAAGCCCCATCTGCTGAAACTGGCCAATCTGTT
TGCCCTCTGGTCAATTGAGGAGGACACTGGAATCTTCCTGCGGGAGAACATCCTCACCCC
TGGAGACATTGACCTGATCAACAGTCTTGTGGACGAGCTCTGTGTTGCAGTTCGAGATCA
GGTAATTGGACTCACTGATGCCTTTGGTCTCTCTGACTTCTTCATTAACGCTCCCATCGG
CTCCTACGATGGTAATGTTTACGAAAAGTACTTTGCCAAGGTCAACCAGCAAAACCCCGC
TACTAACCCTCGTCCTCCCTACTACGAGTCGACTCTCAAGCCCTTCTTGTTCCGAGAAGA
GGAGGACGATGAAATTTGCGATCTCGATGAGTGATGTTAGTAATTATGAGATACATTCTT
TGCAATGATGAGGGCTCTTGTAGAGTATTCTGCTGTAAAGGAGATCTTGAATTTTGTTGT
TGAATTTGTGTAATTGTCTTATGATTATTGTCTTGTGTAGCGCTTTTCAAGCCTGCAGGA
AAAGTGAAATGAACATGTTATTGCCATATCATCCGTTATTGGTGTTTAGTTCCTATTGGG
CTTGATTACCAACGATCCGGGTCGAAAGACCCCTCCGTTTAGGGGTGGTAAGTCTCAAGT
GGCTGAACACGTGCATGCACTGTACATCGCCGAG

>YALI0E32835g.cds
ATGGCCAAGGAGCGAGGTAAGACTCAATTCACTGTCCGAGATGTGACCAACTTCCTCAAT
GGTGGAGAAGAAGAGACCCAGATTGTCGAGAAGATCATGAGCAGTATTGAACGTGATCCA
GTACTGTCTGTCACTGCTGACTACGACTGCAACCTTCAGCAGGCCCGAAAACAGACCATG
GAGCGGGTGGCTGCTCTGTCGCCTTATCTGGTCACCGATACTGAGAAGCTATCTCTGTGG
CGTGCGCAACTGCATGGAATGGTTGATATGTCTACTCGTACGCGGTTGTCGATCCACAAC
AACCTGTTCATTGGTTCCATCAGGGGATCTGGTACTCCTGAACAGTTCAAGTACTGGGTC
AAGAAGGGAGCGGTGGCTGTTAAGCAGTTCTATGGATGCTTTGCCATGACAGAGTTGGGC
CATGGAAGCAACCTCAAGGGACTAGAGACAACCGCCACTTATGACCAGGACAGTGACCAG
TTCATTATCAACACTCCTCATATTGGTGCTACCAAGTGGTGGATTGGCGGTGCAGCCCAC
ACTTCCACCCATTGTGTTTGTTTCGCGAAACTGATTGTGCATGGCAAGGACTATGGTACT
CGAAACTTTGTGGTACCTCTCCGAAATGTCCACGATCACAGTCTCAAGGTCGGTGTTTCA
ATTGGAGACATTGGAAAGAAGATGGGCAGAGATGGTGTTGACAATGGCTGGATCCAGTTC
ACCAATGTTCGAATCCCCAGACAGAACATGCTAATGAGATATGCCAAGGTGTCTGATACT
GGAGTGGTAACCAAACCCGCTCTTGACCAACTCACTTATGGAGCCCTCATTCGAGGTCGA
GTGTCCATGATTGCCGACTCGTTCCACGTCTCCAAACGATTCCTCACAATTGCTCTTCGG
TACGCTTGTGTCCGACGACAGTTTGGAACCTCTGGAGACACTAAGGAGACCAAGATCATC
GACTACCCTTACCACCAGCGACGATTGCTGCCTCTTCTGGCCTACTGCTACGCTATGAAG
ATGGGTGCTGATGAGGCTCAGAAGACTTGGATTGAGACCACCGATCGAATTCTGGCTCTC
AATCCCAACGACCCCGCCCAGAAGAACGATCTGGAGAAGGCCGTCACCGACACAAAGGAG
CTGTTTGCTGCGTCTGCAGGAATGAAGGCATTTACCACGTGGGGATGTGCCAAAATCATT
GATGAGTGCCGACAGGCCTGTGGAGGTCATGGATACTCTGGATATAACGGATTTGGCCAG
GGCTACGCTGACTGGGTTGTCCAGTGTACCTGGGAAGGAGACAACAACGTTCTGTGTCTG
TCAATGGGCCGAGGGCTGGTTCAGTCAGCTCTACAGATTTTGGCTGGAAAGCACGTCGGT
GCTTCTATTCAGTACGTAGGAGACAAGTCTAAAATCTCCCAGAACGGCCAGGGTACCCCC
AGAGAGCAACTTCTGTCCCCCGAGTTTCTAGTAGAAGCTTTCAGAACGGCTTCTCGAAAC
AACATTCTCAGAACCACCGATAAATACCAAGAGCTTGTCAAAACTCTCAATCCCGACCAG
GCCTTTGAGGAGCTGTCTCAGCAGAGATTCCAGTGTGCTCGAATCCACACACGACAGCAT
CTTATCTCTTCATTCTATGCCCGAATTGCCACTGCCAAAGACGATATCAAGCCCCATCTG
CTGAAACTGGCCAATCTGTTTGCCCTCTGGTCAATTGAGGAGGACACTGGAATCTTCCTG
CGGGAGAACATCCTCACCCCTGGAGACATTGACCTGATCAACAGTCTTGTGGACGAGCTC
TGTGTTGCAGTTCGAGATCAGGTAATTGGACTCACTGATGCCTTTGGTCTCTCTGACTTC
TTCATTAACGCTCCCATCGGCTCCTACGATGGTAATGTTTACGAAAAGTACTTTGCCAAG
GTCAACCAGCAAAACCCCGCTACTAACCCTCGTCCTCCCTACTACGAGTCGACTCTCAAG
CCCTTCTTGTTCCGAGAAGAGGAGGACGATGAAATTTGCGATCTCGATGAGTGA

>YALI0E32835g.aa
MAKERGKTQFTVRDVTNFLNGGEEETQIVEKIMSSIERDPVLSVTADYDCNLQQARKQTM
ERVAALSPYLVTDTEKLSLWRAQLHGMVDMSTRTRLSIHNNLFIGSIRGSGTPEQFKYWV
KKGAVAVKQFYGCFAMTELGHGSNLKGLETTATYDQDSDQFIINTPHIGATKWWIGGAAH
TSTHCVCFAKLIVHGKDYGTRNFVVPLRNVHDHSLKVGVSIGDIGKKMGRDGVDNGWIQF
TNVRIPRQNMLMRYAKVSDTGVVTKPALDQLTYGALIRGRVSMIADSFHVSKRFLTIALR
YACVRRQFGTSGDTKETKIIDYPYHQRRLLPLLAYCYAMKMGADEAQKTWIETTDRILAL
NPNDPAQKNDLEKAVTDTKELFAASAGMKAFTTWGCAKIIDECRQACGGHGYSGYNGFGQ
GYADWVVQCTWEGDNNVLCLSMGRGLVQSALQILAGKHVGASIQYVGDKSKISQNGQGTP
REQLLSPEFLVEAFRTASRNNILRTTDKYQELVKTLNPDQAFEELSQQRFQCARIHTRQH
LISSFYARIATAKDDIKPHLLKLANLFALWSIEEDTGIFLRENILTPGDIDLINSLVDEL
CVAVRDQVIGLTDAFGLSDFFINAPIGSYDGNVYEKYFAKVNQQNPATNPRPPYYESTLK
PFLFREEEDDEICDLDE*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

YALI0E32835g

YALI0E32835g

Genomic environment map

Computed results

Homologs and Orthologs

Protein YALI0E32835p

Protein domain map

Computed results for YALI0E32835p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes