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Element type: CDS
Element length: 1353 nucleotides,
on anti-sense strand of
Yali0E: complement(3737079..3738431).
Other names:
YALI-CDS2713.1
YALI-IPF2923
Coding sequence: 451 codons.
Element length: 1353 nucleotides,
on anti-sense strand of
Yali0E: complement(3737079..3738431).
Other names:
YALI-CDS2713.1
YALI-IPF2923
Coding sequence: 451 codons.
Database cross references:
EMBL: CR382131
GeneID: 2912965
HOGENOM: Q6C3W7
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382131
GeneID: 2912965
HOGENOM: Q6C3W7
Homologs and Orthologs
Homologs in protein families: GL3C0576 GL3C0576.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0E31603p 
Protein domain map
Database cross references:
InterPro: IPR007312
KEGG: yli:YALI0E31603g
Pfam: PF04185
RefSeq: XP_504645.1
UniProtKB/TrEMBL: Q6C3W7
UniprotKB: Q6C3W7_YARLI
InterPro: IPR007312
KEGG: yli:YALI0E31603g
Pfam: PF04185
RefSeq: XP_504645.1
UniProtKB/TrEMBL: Q6C3W7
UniprotKB: Q6C3W7_YARLI
Sequence data
>YALI0E31603g.nt TGCTGCATGACATTGGAACCCATCTGATTGGCCAGTGACATGCCCCCTTTGGGTCCAATT TATACCGTTTATTTAGTGTGCGGTTTAAGTGTGCTTTTGGGTTCCAAGATACGTCGCTTG GACAAGACTGATTCATGCCAAGCCAAGCTGCAATGCCAAGGGATGAGATGAAATTTGCAA TATGACGAGTCGTAACATACGACCCCGCATTGGGTCAACAACAAAAAGAAACGAACGACA AACAAGAAGTCGCTCACAGAGCCCCGACTCGTAGCCGCGATGGCTGTCAAATCTTGAACC TGTTGAGCCCCTCTAACTTTACTCAAAAGGAGCCGTGCAAGCGCACATGGCCCGTTATGG CACCAACCAAACTTTGGGCTCCGGAAACCCCTGTGTTTGCGAACAAGACAGCGACGGCCA AGAAAACAAATGGCTCTACTCTTTGTCTCGGCGAAATGATGATAGTGGGCTCAGAATGAC ATCAAGCCATCAAGCACGACGACAGACTCGAGCCAAGACTGGATAAGTCGTTCCGTACAT CATAGACAGTCAAATGTTCGACCCACAACCTCTCTCGTTCGTATAATTGCCATAAGGGAA CTGCTTATATGAGTTTCTATTTGCTAACAGGGGCTTATTTCTCTAACCTCGCCATATTTC GACCCCCGATCTTCCGTGGCCTATTACTTCACTGGGTCTCAGTGTCTGTCTCATTCCCCA TGCTTAACAATGTGAGAACCAATCAACGGGCATAATTGAGCCATGACCCCCAGAGAGATC CAACCGCCAAGTCCACTAAGCTTCTCCAAGGTTAGTCTCAACCTTTCTCACGACGCTAGT AATGCCTCTGAGCGGCAATCGGCCAACCTAGTGTCTACTGACTAGCTCTACAGATGGGGG TCTTGAAACACGTGGATCACGATCTTGTCCTCGCTTCAACATGTATATAAACACCGGGGA GTCTAGCCTCTGAAGGGCCAAGCAACATCTTACACTCGCTATGCTCTTTGCTCCTACCAT CCTCTTTGCCATTGTGGCCGGTGTGTCTGCCCAGACCACCGCCTCCAACGACTACATTGC CTACGATGAGATCGTTTCCAAGGCCACCCGAGCCGCCTCTTTCTCTACCATTGACCCCAA GGCCACCGAGATCGCCAAGGCTGCCGAGACCGCCGTCTCCAACTCGTTCAAGGACAAGCC CGTTGTCAAGGGTAAGGTCTTTGACAAGTTCTACCAGGTGTGGCTCGAGAACACTGACAA GTGGAAGGCTCAGGATGAGCCCGGTCTTGTCGAGCTCCAGAAGCAGGGTATCACCCTCAC CAACTACTGGGCCCTTACCCACCCCTCCATGCCCAACTACGTTGGTTCCGTTGGTGGTGA CTACTTTGGTATCTTCGATGATGCCTTTGTTCGAGTCCCCGAGAACGTGTCCACCGTTGT CGACCTGCTCGACTCCAAGAACATCTCTTGGGGTGAGTACCAGGAGCACCAGCCTTACAC TGGCTTCAAGGGTATGAACTACTCCCGACAGTCCGACTACGCTCCTGACTACGTCCGAAA ACACAACCCTCTCATCATCTACGACTCCGTTGTCGCCAACCCCAACAACCTGGGTTACAT CAAGAACTACACCGAGTTTGACAAAGACGTCAAGAACAATGACCTCCCCCAGTGGGCCTT CATCACCCCCAACATGACCAACGATGGCCACGACACTGATATCTCCTTCTCTGGCCAGTA CGTGACCAACTGGATCAAGCCTCTGCTCAACAACACCGACTTCTTCAACGATAACCTCGT CATCATCACCTTCGATGAGAACGAGACCTACGAGAAGCCCAACTCCATCTTTGCCGTTCT GCTTGGTGGAGCCATCCCTGAGCACCTGCGAGGAACCACCGACAACACCTTCTACGATCA TTACTCCAACATTGCCACCGTTGAGGCCAACTGGGAGCTCCCCCATCTTGGACGACACGA TGTCAACGCCAACGTCTTCCAGTTTGTTGCCGATGAGCTCAAGATCCAGAACCACAACGT CTCCACCGAGGGTCTGTACCGAAACGCCTCCGAGCCCGGTTACTTCATGGACAACACTCT TGCCATCCCCGTTCCCGATCTGACCGCCATTGGTACCTCCGGCAACAAGATTCTGCCCAA GATCGCCCAGGTTTGGGGTAAGGCTGCTAACGCCTCCACTAACTCCACTTCCTCTGCCAC TGCTGGCGCCGGCGCCACTGGAGGCAACTCTACCGCCCCCACCCTCACCCCCTCGAATGC TGTCAATGGAGCCACCCTCGCCACTCTTTCCGGCGCTGCTCTTGTCGGTGCCATTGGCGC TCTTCTTCTATAGGCAGTTTGACATTTGTCAATTGTTGTATCTAAAAAATGTTTGTTGAT GTACTGTATTTGTAAATTGTCAAGTGCTATTTACTATTTTTTTTCTGCATATACATACAT TTAATTATAACTATAATTAGTATACTGTAAGTAATGTGTGTTCATTTGTTGTAATAGTGT AAGTATTGTTCGGTACAGACATCTCCAACATGGTATATCAGATGTATTGTACAAGTCCTG GAGCTACATTCCAGCTTCAAGACTGAAAGTCATAGTCGAATGTCGTATCTGCTGATCAAC TGAGACAGTGGTT
>YALI0E31603g.cds ATGCTCTTTGCTCCTACCATCCTCTTTGCCATTGTGGCCGGTGTGTCTGCCCAGACCACC GCCTCCAACGACTACATTGCCTACGATGAGATCGTTTCCAAGGCCACCCGAGCCGCCTCT TTCTCTACCATTGACCCCAAGGCCACCGAGATCGCCAAGGCTGCCGAGACCGCCGTCTCC AACTCGTTCAAGGACAAGCCCGTTGTCAAGGGTAAGGTCTTTGACAAGTTCTACCAGGTG TGGCTCGAGAACACTGACAAGTGGAAGGCTCAGGATGAGCCCGGTCTTGTCGAGCTCCAG AAGCAGGGTATCACCCTCACCAACTACTGGGCCCTTACCCACCCCTCCATGCCCAACTAC GTTGGTTCCGTTGGTGGTGACTACTTTGGTATCTTCGATGATGCCTTTGTTCGAGTCCCC GAGAACGTGTCCACCGTTGTCGACCTGCTCGACTCCAAGAACATCTCTTGGGGTGAGTAC CAGGAGCACCAGCCTTACACTGGCTTCAAGGGTATGAACTACTCCCGACAGTCCGACTAC GCTCCTGACTACGTCCGAAAACACAACCCTCTCATCATCTACGACTCCGTTGTCGCCAAC CCCAACAACCTGGGTTACATCAAGAACTACACCGAGTTTGACAAAGACGTCAAGAACAAT GACCTCCCCCAGTGGGCCTTCATCACCCCCAACATGACCAACGATGGCCACGACACTGAT ATCTCCTTCTCTGGCCAGTACGTGACCAACTGGATCAAGCCTCTGCTCAACAACACCGAC TTCTTCAACGATAACCTCGTCATCATCACCTTCGATGAGAACGAGACCTACGAGAAGCCC AACTCCATCTTTGCCGTTCTGCTTGGTGGAGCCATCCCTGAGCACCTGCGAGGAACCACC GACAACACCTTCTACGATCATTACTCCAACATTGCCACCGTTGAGGCCAACTGGGAGCTC CCCCATCTTGGACGACACGATGTCAACGCCAACGTCTTCCAGTTTGTTGCCGATGAGCTC AAGATCCAGAACCACAACGTCTCCACCGAGGGTCTGTACCGAAACGCCTCCGAGCCCGGT TACTTCATGGACAACACTCTTGCCATCCCCGTTCCCGATCTGACCGCCATTGGTACCTCC GGCAACAAGATTCTGCCCAAGATCGCCCAGGTTTGGGGTAAGGCTGCTAACGCCTCCACT AACTCCACTTCCTCTGCCACTGCTGGCGCCGGCGCCACTGGAGGCAACTCTACCGCCCCC ACCCTCACCCCCTCGAATGCTGTCAATGGAGCCACCCTCGCCACTCTTTCCGGCGCTGCT CTTGTCGGTGCCATTGGCGCTCTTCTTCTATAG
>YALI0E31603g.aa MLFAPTILFAIVAGVSAQTTASNDYIAYDEIVSKATRAASFSTIDPKATEIAKAAETAVS NSFKDKPVVKGKVFDKFYQVWLENTDKWKAQDEPGLVELQKQGITLTNYWALTHPSMPNY VGSVGGDYFGIFDDAFVRVPENVSTVVDLLDSKNISWGEYQEHQPYTGFKGMNYSRQSDY APDYVRKHNPLIIYDSVVANPNNLGYIKNYTEFDKDVKNNDLPQWAFITPNMTNDGHDTD ISFSGQYVTNWIKPLLNNTDFFNDNLVIITFDENETYEKPNSIFAVLLGGAIPEHLRGTT DNTFYDHYSNIATVEANWELPHLGRHDVNANVFQFVADELKIQNHNVSTEGLYRNASEPG YFMDNTLAIPVPDLTAIGTSGNKILPKIAQVWGKAANASTNSTSSATAGAGATGGNSTAP TLTPSNAVNGATLATLSGAALVGAIGALLL*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0E31603p