HomeYALI0E17545g
weakly similar to uniprot|P09950 Saccharomyces cerevisiae YDR232w HEM1 5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway
Element type: CDS
Element length: 1182 nucleotides,
on sense strand of
Yali0E: 2064661..2065842.
Other names:
YALI-CDS3320.1
YALI-IPF3765
Coding sequence: 394 codons.
Element length: 1182 nucleotides,
on sense strand of
Yali0E: 2064661..2065842.
Other names:
YALI-CDS3320.1
YALI-IPF3765
Coding sequence: 394 codons.
Database cross references:
EMBL: CR382131
GeneID: 2911674
HOGENOM: Q6C5J6
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382131
GeneID: 2911674
HOGENOM: Q6C5J6
Homologs and Orthologs
Homologs in protein families: GL3C0100 GL3C0100.N3Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0E17545p 
weakly similar to uniprot|P09950 Saccharomyces cerevisiae YDR232w HEM1 5-aminolevulinate synthase
Protein domain map
Database cross references:
Gene3D: G3DSA:3.40.640.10
InterPro: IPR004839
InterPro: IPR015421
KEGG: yli:YALI0E17545g
Pfam: PF00155
RefSeq: XP_504066.1
UniProtKB/TrEMBL: Q6C5J6
UniprotKB: Q6C5J6_YARLI
Gene3D: G3DSA:3.40.640.10
InterPro: IPR004839
InterPro: IPR015421
KEGG: yli:YALI0E17545g
Pfam: PF00155
RefSeq: XP_504066.1
UniProtKB/TrEMBL: Q6C5J6
UniprotKB: Q6C5J6_YARLI
Gene Ontology terms
| GO:0030170 | pyridoxal phosphate binding |
| GO:0016769 | transferase activity, transferring nitrogenous groups |
| GO:0009058 | biosynthetic process |
Sequence data
>YALI0E17545g.nt GCCAACTGATATATCTAGGAAATTGTTACCGTAAATGTATGTTGGCTGCTAGTGGACACT GAAGGGTATAAATGGCATATTGGATGTGAAAATAACAATCAGAAGAACGAGGGGATCTTA ACGGTACCAAAATCACCAACTTTTCGTGGGGGGTTCGTGAAATAAAACAGTTATTTATAA TGTCACGGGGATCCAATTTCGTCAAATGTGATGTTATCAACTAAGATACATCTTCTTCAT GATCCTTTATCATTGAATGATGGAGCTAGTCAGATTGTGTAGATTATAGCACCTTCCAAA GGTCAATTGATGATGATGATGAGTACATAAGAAGTACATTCTCAAACTGGTGATTTCATA CTGATTTTAGTGCTACAATCGTCTCCTACATTACTCTTCCATACCACTCACAACTACACA TCATCATAAATCTCTCTCTTATCTTCTGTTGCAATCAAACAGACCCTCCAAAAGAAGTAA TTAAAGAAGTAATTCTTGGCTTTGAGAGCTGAAAAAACTTGATAAATATATATACAAGCG TGTGTTTAAAAGCTATCCACAAATTTCAGCCCAAATTTCAGCTAAATACTGTCCCAAACA ACACATCTAACTCGTCTAAGCGCCCGCCAAACTCCATCCGGTCCGATATAGTGTAGGGGC TATCACATCACGCTCTCAAGTTGAGAACCGTGGAGACCGGGGTTCGATTCCCCGTATCGG AGTAAACCAGAAGTTCCTGCTTCTTTTTTGTTCTTCCCAGAGTGTATGTGTAGGCCGACC CACCATTTTTTGGCCATCCAATGGCATTGCTTACATAAGCTTGCTTTATCCGTGCGACTC ACCGTGACTCAACTGAACGACTCAATTGAGTCACGACAACCTTAATTTTTACCCCGAAAT TTAACCGAGTGGAGAAAGTGCCAGGGATCCACTCAGTAGCACTATATAACCGCATTTCAT CTCTTGATCTCTTTCCCAACACATTTTTGACATCCCCAACATGCTCAAGCAACTGGAAAA TATTCTTGAGTCGCGAAAGCACAAAAACAGGTTCCGAAAATTGACGGTCATGGATCCTGA GTCGACGGTGGATTTTTCTTCGAACGATTTTCTGTCGCTCGGAAAGTATCAACCATTCAA AGACAGCGTCAGTGTCAAGGTGGCGGATTTCTGCGCCCAAACCAGCTCTTCTCTGGGTTC TGGAGGGTCTCGACTTTTGGATGGAAATTGTGCACTGTACGAGGGTCTTGAACGTCAGAT TGCAGCATTCCATGGAGCAAAGTCTGGCTTGATTTTCAATTCTGGATTCGACGCCAACTC GGGGTTTTTCTCCTGTCTTCCTCAGCCTCAGGATATAGTCATTTACGACGAGTTGATCCA TGCCAGTGTTCATGAAGGAATGCGTCAATGTCGGGCAAAGAAACGGGTTCTTTTCAAGCA CAATGACGTGGAGGACTTTGAGCGGGTTTTGAACCAGTACAAGGGCGAATCAGGCAACAT TTTTGTGGCCGTAGAGGCTGTATACAGCATGGATGGTGATACAGCTCCGTTGAGACAACT GTACGACGTTTCAGACCGTCTGAACAGAGAGATTCTTTTGGTGGTGGACGAAGCTCATGC CACAGGTGTACTTGGAGACCAGGGACGAGGTCTGGTGTGTGCTCTCGGTATGGAGAAACA GGTATTTGCTCGAATCCATACGTTTGGAAAAGCTCTGAGTGCCAATGGAGCCATTATTTT ATGTCATCCCGTGGTTCGATCTTATCTGATCAACTATGCTCGTTCTTTTATCTTTACAAC TGCTCTTGGTCAGGTGAATCTGCTCATCATTCAGGCCACCTATGAGCTTCTGGAAACCCA GGCAGCAGCACATCTTCAGACTCAACTATGGGACAATCTGCAGCGGTTTTCCACGGGGTT GAAGGACACTGGAGTTCACGTTTATCCTCCTGTGCCCCGGTCGGCCATCTTTTCAGTCTT CTGCGACAACCCGCGGTCTCTGGCGGCCCACTGTCAGCAGTCTGGGCTGGTTGTGAGACC CATTGTGCATCCCACGGTTCCCAAGGGAACGGAGAGAGTCCGGGTGTGCATTCACAGTGC TAATACCGCCAAGGAGGTGGACATGCTAGTGCACAGGATTCTCGAGTGGCATTCTCAGAA GGAGATGAGAGGGCGGTTGTAGAGGGTACAGACTCTCCTAGGAGTAGAGGGCAATAGAAA TTGAAGATACGAAATCTCGATAGTAGCTATGGAAGTTATCTGAGGCTTGGCAGTGCCGTG TGGTTTCAACTGGTCTTGTCAGATTGTACCAGTTGCACATCAAGGAGGTGCGGAGATAGA CAATCAGGAGATAATGAGGTGGTCAGGTGGACTTCTGTGCTGTAGGAGAACAAGAGAACA AGCAACAAGCAACAAGCAACAAGCAACAAGCAACAAGCAACAAAAAACAAGCAACAAGGT GAACAAAAAAACAGTACACGTC
>YALI0E17545g.cds ATGCTCAAGCAACTGGAAAATATTCTTGAGTCGCGAAAGCACAAAAACAGGTTCCGAAAA TTGACGGTCATGGATCCTGAGTCGACGGTGGATTTTTCTTCGAACGATTTTCTGTCGCTC GGAAAGTATCAACCATTCAAAGACAGCGTCAGTGTCAAGGTGGCGGATTTCTGCGCCCAA ACCAGCTCTTCTCTGGGTTCTGGAGGGTCTCGACTTTTGGATGGAAATTGTGCACTGTAC GAGGGTCTTGAACGTCAGATTGCAGCATTCCATGGAGCAAAGTCTGGCTTGATTTTCAAT TCTGGATTCGACGCCAACTCGGGGTTTTTCTCCTGTCTTCCTCAGCCTCAGGATATAGTC ATTTACGACGAGTTGATCCATGCCAGTGTTCATGAAGGAATGCGTCAATGTCGGGCAAAG AAACGGGTTCTTTTCAAGCACAATGACGTGGAGGACTTTGAGCGGGTTTTGAACCAGTAC AAGGGCGAATCAGGCAACATTTTTGTGGCCGTAGAGGCTGTATACAGCATGGATGGTGAT ACAGCTCCGTTGAGACAACTGTACGACGTTTCAGACCGTCTGAACAGAGAGATTCTTTTG GTGGTGGACGAAGCTCATGCCACAGGTGTACTTGGAGACCAGGGACGAGGTCTGGTGTGT GCTCTCGGTATGGAGAAACAGGTATTTGCTCGAATCCATACGTTTGGAAAAGCTCTGAGT GCCAATGGAGCCATTATTTTATGTCATCCCGTGGTTCGATCTTATCTGATCAACTATGCT CGTTCTTTTATCTTTACAACTGCTCTTGGTCAGGTGAATCTGCTCATCATTCAGGCCACC TATGAGCTTCTGGAAACCCAGGCAGCAGCACATCTTCAGACTCAACTATGGGACAATCTG CAGCGGTTTTCCACGGGGTTGAAGGACACTGGAGTTCACGTTTATCCTCCTGTGCCCCGG TCGGCCATCTTTTCAGTCTTCTGCGACAACCCGCGGTCTCTGGCGGCCCACTGTCAGCAG TCTGGGCTGGTTGTGAGACCCATTGTGCATCCCACGGTTCCCAAGGGAACGGAGAGAGTC CGGGTGTGCATTCACAGTGCTAATACCGCCAAGGAGGTGGACATGCTAGTGCACAGGATT CTCGAGTGGCATTCTCAGAAGGAGATGAGAGGGCGGTTGTAG
>YALI0E17545g.aa MLKQLENILESRKHKNRFRKLTVMDPESTVDFSSNDFLSLGKYQPFKDSVSVKVADFCAQ TSSSLGSGGSRLLDGNCALYEGLERQIAAFHGAKSGLIFNSGFDANSGFFSCLPQPQDIV IYDELIHASVHEGMRQCRAKKRVLFKHNDVEDFERVLNQYKGESGNIFVAVEAVYSMDGD TAPLRQLYDVSDRLNREILLVVDEAHATGVLGDQGRGLVCALGMEKQVFARIHTFGKALS ANGAIILCHPVVRSYLINYARSFIFTTALGQVNLLIIQATYELLETQAAAHLQTQLWDNL QRFSTGLKDTGVHVYPPVPRSAIFSVFCDNPRSLAAHCQQSGLVVRPIVHPTVPKGTERV RVCIHSANTAKEVDMLVHRILEWHSQKEMRGRL*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0E17545p