HomeYALI0E15125g
similar to uniprot|O60064 Schizosaccharomyces pombe Putative mannose-1-phosphate guanyltransferase
Element type: CDS
Element length: 1239 nucleotides,
on sense strand of
Yali0E: 1803785..1805023.
Other names:
YALI-CDS3111.1
YALI-IPF4457
Coding sequence: 413 codons.
Element length: 1239 nucleotides,
on sense strand of
Yali0E: 1803785..1805023.
Other names:
YALI-CDS3111.1
YALI-IPF4457
Coding sequence: 413 codons.
Database cross references:
EMBL: CR382131
GeneID: 2911546
HOGENOM: Q6C5U4
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382131
GeneID: 2911546
HOGENOM: Q6C5U4
Homologs and Orthologs
Homologs in protein families: GL3C0213 GL3C0213.N4Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0E15125p 
Protein domain map
Database cross references:
InterPro: IPR001451
InterPro: IPR005835
KEGG: yli:YALI0E15125g
PROSITE: PS00101
Pfam: PF00132
Pfam: PF00483
RefSeq: XP_503968.1
UniProtKB/TrEMBL: Q6C5U4
UniprotKB: Q6C5U4_YARLI
InterPro: IPR001451
InterPro: IPR005835
KEGG: yli:YALI0E15125g
PROSITE: PS00101
Pfam: PF00132
Pfam: PF00483
RefSeq: XP_503968.1
UniProtKB/TrEMBL: Q6C5U4
UniprotKB: Q6C5U4_YARLI
Gene Ontology terms
| GO:0016779 | nucleotidyltransferase activity |
| GO:0009058 | biosynthetic process |
| GO:0008415 | acyltransferase activity |
Sequence data
Nucleotide sequence
>YALI0E15125g.nt AGGAAGGGTTTACATGCTAGATGTGGTGTTGCAATATAGCATCTCAAAGTGCATGCAAGC CCCGCAGCCTCTAGCTTCAAGATTCATGCAGGTGAGTCTGGGCTTGCCAGTTCGAGTCTT TCAAATGTAATTATATGCCCAACATTAGAGATAAGAGATCTGGCACTAGATAAATCGATC AGACGACCGTGTCTGGCGCGAAAGCTGTACTTTTACGAGGGTGTCACACCTTGAAAACAA AGGGAATTGACCAAATAACTCCAACTACGGACTATGGAGACTGGTTTGTCCACTTTAGAG GGGGCGAATTCAGAGTTTAAAGGGCGCTAACAAACGAGGCGTGGGGAATCGTTTGACCAA TATATACAAGCGGGTGTGAGCGGGTTCTTGTTCGAGAGGGTCTTTCTAAGGATAATAACT CTCATCTAGGTCCTTCTGTGTCTTGTGTGATAGGACCTGCGAACCTCCATCGTGCGCACC CGTTGCGGTCACGTGATGTTACGCATGATGTAGCAATGGTGGGGAGGATTGGCGGCTATA CAGTTCTGACGCAGAGTGAGATTGTTCCAGGATATTCCGAGGCAGTCCTATGCAGCAGTT ACTTCAACCACATTTCAAAAAATAGGTTCGTGAAAGTCAGGGCCGTACAGGTCTCACTCT GGGTTGGGGTTAGGGTCTGAATCGGGTAAATTTCACGTAATAGTTAGTGTGAGACCAAAG TTACACACGTACACCACTGACTGAGGCAACTGCACGTACATTGCAGACTAATTGTAGCCG ACGCGGGAACAAACATGGAGATTGATAGTTTGGTAGGTGTATTTTGAAGCTCAAGGGACA TGAAATGCCGTATATTCTTGGATATTAGCCTGCGAGGATAGCAGCACCAGCAGCAAAAAA TAAGCTTTCAACGTGGGCTAAGGTTTCGACAACACATCACCACCACGAAACTGCACACCA GCCCCTTCCACACACAATAACACCCCAACACATACACAAAATGTCTACCAAGGCTCTTAT TCTCGTTGGAGGCGGTACCCGAGGAACTCGATTCCGACCTCTGTCTCTGGACACTCCTAA GGTTCTCTTCCCCGTTGGAGGCAAGCCCATCCTCAGCCATGCAGTCGACGCCGTGGCTTC CCTCAAGGATGTCAAGGAGGTTCTCCTCGTTGGTTTTTATGAGGACTCTGTCTTTTCCCA GTTCATTGCTGACACCAATAAGCAGTACCCCAACCTCAGCATCAAGTACCTTCGAGAGTA CAAGGCTATGGGCACTGCCGGTGGTCTCTACCACTTCCGAGATGTCATTCTCAAGGGTAA CCCCTCCCGATTCTTCGTCATCCATGCTGATGTCTGCTGTTCTTTCCCCCTCAAGGAGAT TGAGGAGTTCTACGAGGAGAAGAAGGCCAAGTATGTCATTCTTGGCACCACTGTCCCTGC TGCTGTCGCCAACAACTTTGGTGCCATTGTTACCGACCCCGAAACTCAGCGAGTTATCCA TTACGTTGAGAAGCCTGAGTCTCACATTTCCAACCTGATCAATGCTGGTGTTTACCTTTT CGACCAGACCATCTTCGACACTATCGCTGCTGCTAAGAAGGTGCGAGAAGAGAAGGCCCA GGATCCCTCTTTTGTTGGTGAGGGCGATGAGGACCACCTCCGACTTGAGCAGGATATTCT CGTCCAGCTCCCTGCTACTGACGCTTTCTACGCCTACGAGACCAAGGACTTCTGGCGACA GATCAAGACCGCTGGCTCTGCTGTCCCCGCCAACGCGCTTTACCTGCAGCAGGCTTTTCA GGCTGATCCCAAGCAGCCCGGTCTTCAGGCTCCCTCTGCCAACATTGTGCCTCCTGTCTA CATTGATCCCTCTGCCAAGATCGACTCTACTGCCAAGCTCGGCCCCAACGTGTCCATCGG TCCCCGTGCCGTGATCGCCGCTGGTGCTCGAATCAAGGACTCTATTGTTCTCGAGGGTGT CGAGGTCAAGCATGATGCCGCCGTGTTCCACTCTATTCTTGGTCGAGGATGCAAGATTGG ATCCTGGGCCAGAATCGAGGGATCCGCTGTTGCTCCCAACGACCACTCCGAGACCCTCGT TAAGGATGGCGCCAAGATCCAGTCTGTGACCATTCTCTCTTCTGACGTTAATGTCTCCGA GGAGGTGCATGTTCAGAACACTATCGTTCTTCCCCACAAGGACATCAAGAACGATGTTGT GAACGAGGTGATTATGTAAGAGTCGACGATTGATGTAGTAATAAATAATGATGTAACTTC TCAGCGAGTTTGTAAAAAACTACAAGAAGCAGTTGCCAAAGATTTTTAGGGAATGTGATT GTCTCATTGAGGCGATAACTAACACCAAACGAGGAACATTGAATCTGTACAGAAAAACGT TCATTACATACCCGGAACCTTATTTCACACACCTACAGTACTTGGATTGGTATGAGAATC ATATGCCAGTGATTTCAACAAACAGTTCAAAATAGCGTCAAAAGAAACACCAAAAAAAAA GGCCCACCCTCGAAAGACT
Coding sequence
>YALI0E15125g.cds ATGTCTACCAAGGCTCTTATTCTCGTTGGAGGCGGTACCCGAGGAACTCGATTCCGACCT CTGTCTCTGGACACTCCTAAGGTTCTCTTCCCCGTTGGAGGCAAGCCCATCCTCAGCCAT GCAGTCGACGCCGTGGCTTCCCTCAAGGATGTCAAGGAGGTTCTCCTCGTTGGTTTTTAT GAGGACTCTGTCTTTTCCCAGTTCATTGCTGACACCAATAAGCAGTACCCCAACCTCAGC ATCAAGTACCTTCGAGAGTACAAGGCTATGGGCACTGCCGGTGGTCTCTACCACTTCCGA GATGTCATTCTCAAGGGTAACCCCTCCCGATTCTTCGTCATCCATGCTGATGTCTGCTGT TCTTTCCCCCTCAAGGAGATTGAGGAGTTCTACGAGGAGAAGAAGGCCAAGTATGTCATT CTTGGCACCACTGTCCCTGCTGCTGTCGCCAACAACTTTGGTGCCATTGTTACCGACCCC GAAACTCAGCGAGTTATCCATTACGTTGAGAAGCCTGAGTCTCACATTTCCAACCTGATC AATGCTGGTGTTTACCTTTTCGACCAGACCATCTTCGACACTATCGCTGCTGCTAAGAAG GTGCGAGAAGAGAAGGCCCAGGATCCCTCTTTTGTTGGTGAGGGCGATGAGGACCACCTC CGACTTGAGCAGGATATTCTCGTCCAGCTCCCTGCTACTGACGCTTTCTACGCCTACGAG ACCAAGGACTTCTGGCGACAGATCAAGACCGCTGGCTCTGCTGTCCCCGCCAACGCGCTT TACCTGCAGCAGGCTTTTCAGGCTGATCCCAAGCAGCCCGGTCTTCAGGCTCCCTCTGCC AACATTGTGCCTCCTGTCTACATTGATCCCTCTGCCAAGATCGACTCTACTGCCAAGCTC GGCCCCAACGTGTCCATCGGTCCCCGTGCCGTGATCGCCGCTGGTGCTCGAATCAAGGAC TCTATTGTTCTCGAGGGTGTCGAGGTCAAGCATGATGCCGCCGTGTTCCACTCTATTCTT GGTCGAGGATGCAAGATTGGATCCTGGGCCAGAATCGAGGGATCCGCTGTTGCTCCCAAC GACCACTCCGAGACCCTCGTTAAGGATGGCGCCAAGATCCAGTCTGTGACCATTCTCTCT TCTGACGTTAATGTCTCCGAGGAGGTGCATGTTCAGAACACTATCGTTCTTCCCCACAAG GACATCAAGAACGATGTTGTGAACGAGGTGATTATGTAA
Predicted translation product
>YALI0E15125g.aa MSTKALILVGGGTRGTRFRPLSLDTPKVLFPVGGKPILSHAVDAVASLKDVKEVLLVGFY EDSVFSQFIADTNKQYPNLSIKYLREYKAMGTAGGLYHFRDVILKGNPSRFFVIHADVCC SFPLKEIEEFYEEKKAKYVILGTTVPAAVANNFGAIVTDPETQRVIHYVEKPESHISNLI NAGVYLFDQTIFDTIAAAKKVREEKAQDPSFVGEGDEDHLRLEQDILVQLPATDAFYAYE TKDFWRQIKTAGSAVPANALYLQQAFQADPKQPGLQAPSANIVPPVYIDPSAKIDSTAKL GPNVSIGPRAVIAAGARIKDSIVLEGVEVKHDAAVFHSILGRGCKIGSWARIEGSAVAPN DHSETLVKDGAKIQSVTILSSDVNVSEEVHVQNTIVLPHKDIKNDVVNEVIM*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0E15125p