HomeYALI0D25366g
similar to uniprot|Q8I1N3 Trypanosoma cruzi Ascorbate- dependent peroxidase CCP1 homologue
Element type: CDS
Element length: 894 nucleotides,
on sense strand of
Yali0D: 3383212..3384105.
Other names:
YALI-CDS4413.1
YALI-IPF5886
Coding sequence: 298 codons.
Element length: 894 nucleotides,
on sense strand of
Yali0D: 3383212..3384105.
Other names:
YALI-CDS4413.1
YALI-IPF5886
Coding sequence: 298 codons.
Database cross references:
EMBL: CR382130
GeneID: 2910665
HOGENOM: Q6C7U1
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382130
GeneID: 2910665
HOGENOM: Q6C7U1
Homologs and Orthologs
Homologs in protein families: GL3C0873 GL3C0873.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0D25366p 
Protein domain map
Database cross references:
InterPro: IPR002016
InterPro: IPR002207
KEGG: yli:YALI0D25366g
PRINTS: PR00458
PRINTS: PR00459
PROSITE: PS00435
PROSITE: PS00436
PROSITE: PS50873
PeroxiBase: 2365
Pfam: PF00141
RefSeq: XP_503271.1
UniProtKB/Swiss-Prot: Q6C7U1
UniprotKB: CCPR3_YARLI
InterPro: IPR002016
InterPro: IPR002207
KEGG: yli:YALI0D25366g
PRINTS: PR00458
PRINTS: PR00459
PROSITE: PS00435
PROSITE: PS00436
PROSITE: PS50873
PeroxiBase: 2365
Pfam: PF00141
RefSeq: XP_503271.1
UniProtKB/Swiss-Prot: Q6C7U1
UniprotKB: CCPR3_YARLI
Gene Ontology terms
None available yet
Sequence data
>YALI0D25366g.nt TTAAAAATTCATTAAAATTAGACATCTTCATGAAACCACAAACAGGAGATGAGCTTCAGA TCCAGTAAGAAACGGCGGTCGGGATGTCTTTGAGATTTTTTTTTTTGATCCAGACTTCGT GTTTCTGGACACAAACAGAATCGCAGAGTTACAACAAAAACATCACGAGATTTAGTCGCA GTGCTGTTGTCTATATTCTCGCTAAATAATCCTGCAACTCACCTTTGCACCTCACCACCC CTCACCGCCCCTCTCTTCACCTTATTTCGATACTTGGGTCTCATTTCAACTCTTCTTCTC CATCATCACTTTATCCTACTCCAACTTCTACTCCAACTTCAACAGCCAGCAGTTCAACCT TCCATCAGCGATACAACTGTTTTTCCAATCCTAGACACAATCGTCGCTCCAGTCGCAACA ACTTCTACAATAGCACACACCGTCACCTGCCTAGTACCGGATAGAAGTGCTCTATCTCTG ACAAAGATCCAAAAGCTCTAACAGCTCCAACATCTTGAAAACTCACTACTGTACTGGACT GAACTTACGACAGACTGTCTGATACCATCGGAAGTCTGTGACACATACCGTTCTCTGCCT GAGTATTTATTAGATACCTACGGTAGCCACAAAGACCAAAACGACTTTGTTCACCTAGCG ACATAACTTACGTGATACCAGTTTACAAACGTCTTTGATTCCAGAGGAAACCCGAGCATT ATTTCATCAGCTCTAATTCTCTACCTGTGATACACCTTCTCAGCACACCTCAGATACCGC TCAGAGACTCCTCCTACGACATTCAAGACGTAACCCACACTTGCCTCTGTTCATCTTCTC AAGGGCTTACCATAGCTTCAAGCCCCCATCCAGACATACCTCCTCCGTCTCTTGATACCT GGCACAGAGAAGTTCTATATAGCAGGATACTTCAGACTTCTGACCGACAACTTTCACGTC AGAAACACTCTACCACCACTTAACTTCACATCTCCCCGGCATGAACTACCCCAGTGTGTC CGAGCAGAAACATCGGGTATTCATCATCTATTCGGCCTACTTACGAGTGCAGTTTCGCGA GTCTGCCCGACTGGCGGTGTCTGTTCGGAATAAAAACTACAATCTTGTGCGGGCAGATCT CCACAATATTCTTCCTCAGAAGAACACTACCGTGTTTAAGGACGGCACTCTTGCCCCTCT GCTGATCCGTCTGGCGTGGCATTCTTGCGCCACCTATGACAAGTACACACGCACGGGAGG GTCCAATGGTGCGACCATGCGGTACCATCTTGAAGCCAGCGATGAGGGCAACGTGGGGCT TGAAGTGGCCCGTTTGTCTCTAGAACCCATCAAGCGCAAACACCCCTGGATCACGTACGC GGACCTATGGATTCTTGCCGGCGTGGTCTCAATTGAGGCGTGCAAAGGTCCCTCAATAAA GTGGCGCGATGGCCGAGTTGACTACGAGGACGACCTTCTGGTGCCCCCGAACGGCCGTCT ACCCTTGGGCGGGGGAGATGCGTCCCACGTGCGGACTATCTTCTCTCGAATGGGGTTTAA CGACCAGGAAACAGTCGCTTTGATTGGTGCTCATTCGCTAGGCCGATTGCACCATCATCG GTCCGGCTTCGATGGTCCGTGGACTTCTAATCCAGCCAAGTGTGACAACGAGTTCTACAA GTTGTTGTTAGGCAACGTTTGGACTCTGGTGGACTCGCCTACTGGACGGAAGCAGTACGT CAACAGCACCGGTCAGGTGATGATGCCCTCGGACATGAGTCTCATTGAGGATGCCAATTT CCGTTTCTGGGTCGATCAGTACGCCGTATCTGAGGAGCTGTGGCGGGACCATTTTGCCCT GGCTTTCGAGAAGTTGACCGAGTTGGGCAGATGAGGAATGTTAGTGGAGTACCCAGTAGT ATTACAAGGTCTTGCAGTGATGCAATAATCCGAATCGTAGTAGTCAACAACAAACAGAAC AGATCCTGTTCTATCCGAACCAATTGTACAAGGGTGCACAAGGCTTCCGAGAACAAAAAA TCTGTTTGGGGTACCAACCAAAAGAGTTGGTTTTGTTAGGGTATAGTTGAGGAATGAATA ACCGGAGGTGGAAATTCGAACAGCAACACTTTCACGTGCTTGGATTGTGGGAGCAGGCAT GTTCAGCAGTGGTATGACGGTTTTGCCATGTTGA
>YALI0D25366g.cds ATGAACTACCCCAGTGTGTCCGAGCAGAAACATCGGGTATTCATCATCTATTCGGCCTAC TTACGAGTGCAGTTTCGCGAGTCTGCCCGACTGGCGGTGTCTGTTCGGAATAAAAACTAC AATCTTGTGCGGGCAGATCTCCACAATATTCTTCCTCAGAAGAACACTACCGTGTTTAAG GACGGCACTCTTGCCCCTCTGCTGATCCGTCTGGCGTGGCATTCTTGCGCCACCTATGAC AAGTACACACGCACGGGAGGGTCCAATGGTGCGACCATGCGGTACCATCTTGAAGCCAGC GATGAGGGCAACGTGGGGCTTGAAGTGGCCCGTTTGTCTCTAGAACCCATCAAGCGCAAA CACCCCTGGATCACGTACGCGGACCTATGGATTCTTGCCGGCGTGGTCTCAATTGAGGCG TGCAAAGGTCCCTCAATAAAGTGGCGCGATGGCCGAGTTGACTACGAGGACGACCTTCTG GTGCCCCCGAACGGCCGTCTACCCTTGGGCGGGGGAGATGCGTCCCACGTGCGGACTATC TTCTCTCGAATGGGGTTTAACGACCAGGAAACAGTCGCTTTGATTGGTGCTCATTCGCTA GGCCGATTGCACCATCATCGGTCCGGCTTCGATGGTCCGTGGACTTCTAATCCAGCCAAG TGTGACAACGAGTTCTACAAGTTGTTGTTAGGCAACGTTTGGACTCTGGTGGACTCGCCT ACTGGACGGAAGCAGTACGTCAACAGCACCGGTCAGGTGATGATGCCCTCGGACATGAGT CTCATTGAGGATGCCAATTTCCGTTTCTGGGTCGATCAGTACGCCGTATCTGAGGAGCTG TGGCGGGACCATTTTGCCCTGGCTTTCGAGAAGTTGACCGAGTTGGGCAGATGA
>YALI0D25366g.aa MNYPSVSEQKHRVFIIYSAYLRVQFRESARLAVSVRNKNYNLVRADLHNILPQKNTTVFK DGTLAPLLIRLAWHSCATYDKYTRTGGSNGATMRYHLEASDEGNVGLEVARLSLEPIKRK HPWITYADLWILAGVVSIEACKGPSIKWRDGRVDYEDDLLVPPNGRLPLGGGDASHVRTI FSRMGFNDQETVALIGAHSLGRLHHHRSGFDGPWTSNPAKCDNEFYKLLLGNVWTLVDSP TGRKQYVNSTGQVMMPSDMSLIEDANFRFWVDQYAVSEELWRDHFALAFEKLTELGR*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0D25366p