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Element type: CDS
Element length: 3297 nucleotides,
on sense strand of
Yali0D: 1569259..1572555.
Other names:
YALI-CDS0337.1
YALI-IPF5028
Coding sequence: 1099 codons.
Element length: 3297 nucleotides,
on sense strand of
Yali0D: 1569259..1572555.
Other names:
YALI-CDS0337.1
YALI-IPF5028
Coding sequence: 1099 codons.
Database cross references:
EMBL: CR382130
GeneID: 2910145
HOGENOM: Q6C9B2
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382130
GeneID: 2910145
HOGENOM: Q6C9B2
Homologs and Orthologs
Homologs in protein families: GL3C4169 GL3C4169.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0D12562p 
Protein domain map
Database cross references:
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
KEGG: yli:YALI0D12562g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
RefSeq: XP_502750.1
SMART: SM00487
UniProtKB/TrEMBL: Q6C9B2
UniprotKB: Q6C9B2_YARLI
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
KEGG: yli:YALI0D12562g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
RefSeq: XP_502750.1
SMART: SM00487
UniProtKB/TrEMBL: Q6C9B2
UniprotKB: Q6C9B2_YARLI
Sequence data
>YALI0D12562g.nt ACTTTGTGCGTCCAAAGAAGCTCTTTTTCCTTCTTTGAGCGCTTAGAAACCTATCGGGAT CCACGTCAGACTCCTCGGACTCCTCCTCCTCTCTTGCATCCAAGGGCAAATGGGGGTCTG AAGGAGGCTCGAGCTCAGAATCAGTCATGTCTGTCGCACTGGAATCGTACATCTCCATGA GCTCCTCCAACAGATCGTCACCGTTCTTGTTGAGCTTGGAGATAAGCATCTTTTTGGGCT TGGACAGCGCATTCAGGGGGTTTCCAGGGAACACCTTCGAAGTGAGCTTGAAGAAGGGAC CTAGAGAAGAACCGGCGTAGTACCTCATGACCTTATCTGGGGGTTGTTCAATCCACTCCT TGGCCAGAGGCCCCACCACCTGCACTCTCGACGACCGGTCCATATGGTCTGGGGTCGAAT ACTCCATTCGAAACACCGTGTATGAGTTTAGGGGCACCTCATTGTACACCCACTCATTGT ACTTTTGGCGCACCGAGTCGAGGTTCTCGTAGTCTGCCAAAAGATCCACCTTGCCCTCCA TGGGATGAGCTCGGCGGCCCTTCAGAAACGGCAGGCCCTTGTCGTCGTCAGGCACGATTT GGGGCGCACGTGGTGAAGCAGCCGTTGATCCATCCATTGACATGCGTCTGAGTTAGTAAC TAGAGGAACCTGTGGAGTAGGTCTGGGTGTCAGCCACATGATCACGTGACATATGACAGG CTTGCAACTCTCCTTTCCTCGCAAATCTCTCCCTCTTCTCACACTCACTCGTTTCTTGAT GTATATGCTGCCCTGTTTCCAACACTGCCTAGGTTTGCTCGGCTCGTACAAGACTAGTTG CGCTGCAAGTTTATGCATGCCAGTCTTAGTAGAGTTCAGCGTGGAACATAACTGAGCGAT GCGATGTGCATCAAGACCCAATATCCATCAGAGCACCACATCTAATGCCCCACAAGAGAC ACATTGAAACCACTCTAGACACTCTTCACAATGCCACACGATGAACGACTCCATTGAAAA TCTCAACAACCTGCTTCTTTTGGGCGTCATATTCGTCACAGGACACCCGAAACTGCCCTG TGAAGGCGAATCAGCCCCAGACGGCTGGAACTGGCCCCCATCGACCTGGTTTCGACTCAC AAACCTGTCGGTACCCTTGAGGGAGCTGAGATATTTGTACGACACTAAAGCGATTCGAGT GACATGCACTTCGACGCCTCTCAAACAACTTCTATCCCTGAGAATCTATCTGGTGCCAGA AGAACTAAGAGTCAAAACCCAACCCAAGCACCTGTACTCGTTCGCCCTCCAACATATGCA CGATAAGCGAAAGTCGGCAATCAGCCGCTTGATACCCTTCTTCTACATACCAGGAAAACA GACACCCATCGTTCCCTTCTATAGAACCAGTCTGGGAGTCATCACAAAGATGGTAACCTC GGAGGAACGGCTCAACAGCTGGCTTAGTCATCTGTGCAATGATCCTGCCAAAAAGACGGC AAGCAGGGACGAGCTGGAAAGTGGCAAAAATCTTCTCATGAGTCTTTACGAGTCTGTTGA CTTTGTGCCTCAGTATGACCTTTCTGATCCGCATGTTGATGCGGTATTCAGTGGCCATGT CGACAACCTCAAGTCAGAGCTGTACCCTTACCAGGCAGAAACAGTCTCACAAATGATGCA CATGGAGGAAACCCCTAGGACGGCTGTCAGCGCGAGGTATTTGTCGGTAAAGGGTTTCTT TTTCCATCCAGAAGATTTGGTGGCTCGCAAGGAGTTACCCGAAACCACCGGCTTGTCTCG AGGAGGAATTCTGGCGGAAAATATGGGTCTTGGAAAGACGTGCATTTGTTTAGCATTGAT ATGTGCCACTCGAAAATCGATGGCAACTGTACCTGCTCAGTATAGCGATACTCTGTCTGA AACGATGATGAAGCTACCGGGCAATGGCAAGATTTCTCAGCTCAAAGTGCTGGTGGCTCA AAGGGTGGCTGAACTAGGAGCTCCTTGGGGTCTCTACGCAGACCGTCTCTCTTCTTCGTG TGTTGCAGTGCTCTCTTCCATCAGATGTACTTTTCTCATGCCTGATATTCCCCGTGTGCG AGTGAGTAGTCGTACAGCCGCTTCACGCGAGCAAAAACCGCCTAGGCGTATCCATCTGTC AGCTACTACGCTTCTTGTTTGTCCAGACTCGCTACCGTTCCAGTGGCTCACTGAGACCAA GAAGCACACGGAGAATCTCAAGGTGATCCATGTCAGTTCTGTGGACAAGGCTCCTGATCT GGACACTGTTCTTGACGCCGATTTGGTGATCATTACTAACAGTATCTTGAAGGAGGTGTT CTCCAACCCAGCATGTTCACACATTCAGGACATTAGGTGGAAACGGCTGATTGTAGATGA AGGTCACGTGGTTGGAAATAACAACTCCATTCTGGACATTTGTGGGCAGGAGTGGATTGC TGAGTGTCGATGGGTCGTCTCAGGAACGCCTACAGCCGGATTGACGCGTCTAGACACAAC GACTCTGTTCGACCACAAGTCCGATCTTCAGAAACTGGGCCGAATAATGGGTGAGTTTCT CAAGATTGAACCGTGGAGTTCGAGCCCTAGCTCGTGGCAGCAGTCGGTCGTGAAGCCTCT TCTAGCTGGTCGGTACGACGGCTTTGAGCACGCTGTCAGGGTCTTGTCTGGAGTTCTAGT GCGTCATCAGATTGAAGACGTGGAGCAAAGCACAAGGCTACCGCCCCTCTACAATGACGT GGTCTTTTTGAATCCCTCATTCTACGACCGAATTATCGCGAACCTCTATGTCTCCAATAT CTGTCTGCTCAACTTGGTTGATGAAAAGAAGTTCGGTTTGAAAAATCTTCTCCGTCGACT CAGAGGAGCCTTCGTGGTCTCCACCAATTATGAGACTCGAGATATCCAATTCTTTCTCGA TGAGCTGAGTGCTTACATCTACGAAAACCGGGTGGCTCTCACTGGCCCCGATAATGAAAA TGATGCTCGGCTTATCAAGAAGATCTTTTCGGCCTTGAACTACGCGGCAACTTCTGGCAA CTGGCTCCAGATTGCCGGAACACAAGAGATGCCCTTCTTTGTGGAAGATGAGACTCGCAC ATCGCGTGCCTTCCAGATGGCTAATCCCCTTATCGTTCGAGACAAGCGTGAGTACGGAAT TATTGGAGGTGCACCGCTGACATATCTACAAAGGGCCGCCAGTGAGGATGAAAAGCTGGA TCTGTGGACGGAAACGAAATCCAAAGATGGCACACCTTTGGAGGGTGTTATTAAAGAGCT GTCTGATGATCCCTTGTTCTCAAGCAGATTCTGGACATCCTACAACAGAAATGTTGACAA TAAGAGAGAGCGGAAAGACAAGAAGAATCCAGCCGTCAAGAATTTTCATCATGCAAAGCA GAAAATATCTCCCGAAGAATATCTTGAAAGCGTGGGTTTGAAGGTAGAGTCTGCTCCTAC AGGAGCGCCTCAAAATCACCATTCGCAATTGGAGGCGGATTATCCAGTGAGTGACAAACC CACAATTGTCGGAACTGGCTCGTCCAAGTTGTCTTACCTGGTGTCCAAGACTCTTGTTCT TGTTAAAGATCACAAGATCATTGTTTTTTACGAAGACGTGGACTCAGCCGTCGCTGTTGC TGAGGCCTTTGAAGCAGTAGGGATCAAGCACCTCATTTACACGACAGACAAGGTTTCAAA GGAGAGACGCGCCCAGTATCTCGCCACGTTTGAAGCGACGGACAACTTCCAGGTACTTCT CATGAACATCAACGCTGCTGCGCATGGTCTCAACATCACCTCTGCCTCGTGGGTATTCTT TCTTTCTCCCGTGTGGAGACGAGACATCGAAGCTCAGGCTATCAAGCGAGCTCACCGTAT TGGTCAAAAGTCGGAGGTGCACGTAGAGACCCTCGTACTCCAAGATACTCTGGAGGAAGA TATTTATCGACGTCGAACGGAGATCTCAGATGCTAATGACGAAACCCCAAAGGAAATGGT TGACGACGACCAGCTGCGAGAAACGCTTCTCAACTACGCTTTAACATCCATGGAGAATCT TCACAAAGGAACGACAGACGAAGTCGCGTTCTTTGACAAGCCTGTCCCGCTGTATATCAA GGTCGATAAACACGACCAGTTTGAGAACTCTCTGGTTCACTTCGAGGGTCTGCCGGTGAG AAAGAAGAGGAAGAAGACTGTGGTTGCTGATGGATTTGCATCTTCCAAGAGGAGTAAGGG AAACTTGGTTAAAAAAGAAACTACTGCAAATAGATAGCATTTTTAATACTACAGAAGTCG AAGTAAGCGTATAACATTCAATCATTTAAATCATGTCTATTTAGATGGGCTCGCTAAGGA CGTGGTTGAGTCGAGCAATCTTGGAGGCGACAGAGACGTCAACGGTTCGCTCAGCAACCT CGACAATGAGACCACCGAGGATATCGGGGTTAACCTTGAGGTTGAGCTTGAGCTCACCCT CACCAACGAAAGAAGAGCCAGCAATGGCGGCCTGGATTCGGTTGACGGTCTTCTTGTCGA GCTCGGAGGCAGAGGTGACGGTGGCCTCAACGAGACC
>YALI0D12562g.cds ATGAACGACTCCATTGAAAATCTCAACAACCTGCTTCTTTTGGGCGTCATATTCGTCACA GGACACCCGAAACTGCCCTGTGAAGGCGAATCAGCCCCAGACGGCTGGAACTGGCCCCCA TCGACCTGGTTTCGACTCACAAACCTGTCGGTACCCTTGAGGGAGCTGAGATATTTGTAC GACACTAAAGCGATTCGAGTGACATGCACTTCGACGCCTCTCAAACAACTTCTATCCCTG AGAATCTATCTGGTGCCAGAAGAACTAAGAGTCAAAACCCAACCCAAGCACCTGTACTCG TTCGCCCTCCAACATATGCACGATAAGCGAAAGTCGGCAATCAGCCGCTTGATACCCTTC TTCTACATACCAGGAAAACAGACACCCATCGTTCCCTTCTATAGAACCAGTCTGGGAGTC ATCACAAAGATGGTAACCTCGGAGGAACGGCTCAACAGCTGGCTTAGTCATCTGTGCAAT GATCCTGCCAAAAAGACGGCAAGCAGGGACGAGCTGGAAAGTGGCAAAAATCTTCTCATG AGTCTTTACGAGTCTGTTGACTTTGTGCCTCAGTATGACCTTTCTGATCCGCATGTTGAT GCGGTATTCAGTGGCCATGTCGACAACCTCAAGTCAGAGCTGTACCCTTACCAGGCAGAA ACAGTCTCACAAATGATGCACATGGAGGAAACCCCTAGGACGGCTGTCAGCGCGAGGTAT TTGTCGGTAAAGGGTTTCTTTTTCCATCCAGAAGATTTGGTGGCTCGCAAGGAGTTACCC GAAACCACCGGCTTGTCTCGAGGAGGAATTCTGGCGGAAAATATGGGTCTTGGAAAGACG TGCATTTGTTTAGCATTGATATGTGCCACTCGAAAATCGATGGCAACTGTACCTGCTCAG TATAGCGATACTCTGTCTGAAACGATGATGAAGCTACCGGGCAATGGCAAGATTTCTCAG CTCAAAGTGCTGGTGGCTCAAAGGGTGGCTGAACTAGGAGCTCCTTGGGGTCTCTACGCA GACCGTCTCTCTTCTTCGTGTGTTGCAGTGCTCTCTTCCATCAGATGTACTTTTCTCATG CCTGATATTCCCCGTGTGCGAGTGAGTAGTCGTACAGCCGCTTCACGCGAGCAAAAACCG CCTAGGCGTATCCATCTGTCAGCTACTACGCTTCTTGTTTGTCCAGACTCGCTACCGTTC CAGTGGCTCACTGAGACCAAGAAGCACACGGAGAATCTCAAGGTGATCCATGTCAGTTCT GTGGACAAGGCTCCTGATCTGGACACTGTTCTTGACGCCGATTTGGTGATCATTACTAAC AGTATCTTGAAGGAGGTGTTCTCCAACCCAGCATGTTCACACATTCAGGACATTAGGTGG AAACGGCTGATTGTAGATGAAGGTCACGTGGTTGGAAATAACAACTCCATTCTGGACATT TGTGGGCAGGAGTGGATTGCTGAGTGTCGATGGGTCGTCTCAGGAACGCCTACAGCCGGA TTGACGCGTCTAGACACAACGACTCTGTTCGACCACAAGTCCGATCTTCAGAAACTGGGC CGAATAATGGGTGAGTTTCTCAAGATTGAACCGTGGAGTTCGAGCCCTAGCTCGTGGCAG CAGTCGGTCGTGAAGCCTCTTCTAGCTGGTCGGTACGACGGCTTTGAGCACGCTGTCAGG GTCTTGTCTGGAGTTCTAGTGCGTCATCAGATTGAAGACGTGGAGCAAAGCACAAGGCTA CCGCCCCTCTACAATGACGTGGTCTTTTTGAATCCCTCATTCTACGACCGAATTATCGCG AACCTCTATGTCTCCAATATCTGTCTGCTCAACTTGGTTGATGAAAAGAAGTTCGGTTTG AAAAATCTTCTCCGTCGACTCAGAGGAGCCTTCGTGGTCTCCACCAATTATGAGACTCGA GATATCCAATTCTTTCTCGATGAGCTGAGTGCTTACATCTACGAAAACCGGGTGGCTCTC ACTGGCCCCGATAATGAAAATGATGCTCGGCTTATCAAGAAGATCTTTTCGGCCTTGAAC TACGCGGCAACTTCTGGCAACTGGCTCCAGATTGCCGGAACACAAGAGATGCCCTTCTTT GTGGAAGATGAGACTCGCACATCGCGTGCCTTCCAGATGGCTAATCCCCTTATCGTTCGA GACAAGCGTGAGTACGGAATTATTGGAGGTGCACCGCTGACATATCTACAAAGGGCCGCC AGTGAGGATGAAAAGCTGGATCTGTGGACGGAAACGAAATCCAAAGATGGCACACCTTTG GAGGGTGTTATTAAAGAGCTGTCTGATGATCCCTTGTTCTCAAGCAGATTCTGGACATCC TACAACAGAAATGTTGACAATAAGAGAGAGCGGAAAGACAAGAAGAATCCAGCCGTCAAG AATTTTCATCATGCAAAGCAGAAAATATCTCCCGAAGAATATCTTGAAAGCGTGGGTTTG AAGGTAGAGTCTGCTCCTACAGGAGCGCCTCAAAATCACCATTCGCAATTGGAGGCGGAT TATCCAGTGAGTGACAAACCCACAATTGTCGGAACTGGCTCGTCCAAGTTGTCTTACCTG GTGTCCAAGACTCTTGTTCTTGTTAAAGATCACAAGATCATTGTTTTTTACGAAGACGTG GACTCAGCCGTCGCTGTTGCTGAGGCCTTTGAAGCAGTAGGGATCAAGCACCTCATTTAC ACGACAGACAAGGTTTCAAAGGAGAGACGCGCCCAGTATCTCGCCACGTTTGAAGCGACG GACAACTTCCAGGTACTTCTCATGAACATCAACGCTGCTGCGCATGGTCTCAACATCACC TCTGCCTCGTGGGTATTCTTTCTTTCTCCCGTGTGGAGACGAGACATCGAAGCTCAGGCT ATCAAGCGAGCTCACCGTATTGGTCAAAAGTCGGAGGTGCACGTAGAGACCCTCGTACTC CAAGATACTCTGGAGGAAGATATTTATCGACGTCGAACGGAGATCTCAGATGCTAATGAC GAAACCCCAAAGGAAATGGTTGACGACGACCAGCTGCGAGAAACGCTTCTCAACTACGCT TTAACATCCATGGAGAATCTTCACAAAGGAACGACAGACGAAGTCGCGTTCTTTGACAAG CCTGTCCCGCTGTATATCAAGGTCGATAAACACGACCAGTTTGAGAACTCTCTGGTTCAC TTCGAGGGTCTGCCGGTGAGAAAGAAGAGGAAGAAGACTGTGGTTGCTGATGGATTTGCA TCTTCCAAGAGGAGTAAGGGAAACTTGGTTAAAAAAGAAACTACTGCAAATAGATAG
>YALI0D12562g.aa MNDSIENLNNLLLLGVIFVTGHPKLPCEGESAPDGWNWPPSTWFRLTNLSVPLRELRYLY DTKAIRVTCTSTPLKQLLSLRIYLVPEELRVKTQPKHLYSFALQHMHDKRKSAISRLIPF FYIPGKQTPIVPFYRTSLGVITKMVTSEERLNSWLSHLCNDPAKKTASRDELESGKNLLM SLYESVDFVPQYDLSDPHVDAVFSGHVDNLKSELYPYQAETVSQMMHMEETPRTAVSARY LSVKGFFFHPEDLVARKELPETTGLSRGGILAENMGLGKTCICLALICATRKSMATVPAQ YSDTLSETMMKLPGNGKISQLKVLVAQRVAELGAPWGLYADRLSSSCVAVLSSIRCTFLM PDIPRVRVSSRTAASREQKPPRRIHLSATTLLVCPDSLPFQWLTETKKHTENLKVIHVSS VDKAPDLDTVLDADLVIITNSILKEVFSNPACSHIQDIRWKRLIVDEGHVVGNNNSILDI CGQEWIAECRWVVSGTPTAGLTRLDTTTLFDHKSDLQKLGRIMGEFLKIEPWSSSPSSWQ QSVVKPLLAGRYDGFEHAVRVLSGVLVRHQIEDVEQSTRLPPLYNDVVFLNPSFYDRIIA NLYVSNICLLNLVDEKKFGLKNLLRRLRGAFVVSTNYETRDIQFFLDELSAYIYENRVAL TGPDNENDARLIKKIFSALNYAATSGNWLQIAGTQEMPFFVEDETRTSRAFQMANPLIVR DKREYGIIGGAPLTYLQRAASEDEKLDLWTETKSKDGTPLEGVIKELSDDPLFSSRFWTS YNRNVDNKRERKDKKNPAVKNFHHAKQKISPEEYLESVGLKVESAPTGAPQNHHSQLEAD YPVSDKPTIVGTGSSKLSYLVSKTLVLVKDHKIIVFYEDVDSAVAVAEAFEAVGIKHLIY TTDKVSKERRAQYLATFEATDNFQVLLMNINAAAHGLNITSASWVFFLSPVWRRDIEAQA IKRAHRIGQKSEVHVETLVLQDTLEEDIYRRRTEISDANDETPKEMVDDDQLRETLLNYA LTSMENLHKGTTDEVAFFDKPVPLYIKVDKHDQFENSLVHFEGLPVRKKRKKTVVADGFA SSKRSKGNLVKKETTANR*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0D12562g