YALI0D06039g

similar to uniprot|P22146 Saccharomyces cerevisiae YMR307w GAS1 glycophospholipid-anchored surface glycoprotein

Genomic environment map

Element type: CDS
Element length: 1659 nucleotides,
on anti-sense strand of
Yali0D: complement(771054..772712).
Other names:
YALI-CDS1947.1
YALI-IPF5338
Coding sequence: 553 codons.

Database cross references:
EMBL: CR382130
GeneID: 2910857
GenomeReviews: CR382130_GR
HOGENOM: HBG737647

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3R0042
Robust family of 55 members, sczltkgdpy (5 6 5 6 5 6 6 4 8 4)
55-member family, phyletic pattern sczltkgdy, profile (5 6 5 6 5 6 6 4 4)
Proteins: YALI0D06039p YALI0D04851p YALI0C06644p YALI0A03597p PISO0L01551p PISO0K01550p PISO0J20887p PISO0I19126p PISO0H12283p PISO0G12282p PISO0F07859p PISO0E06516p DEHA2F06314p DEHA2D13706p DEHA2C11528p DEHA2A07370p ERGO0G00528p ERGO0G00506p ERGO0E16236p ERGO0D08822p ERGO0D05236p ERGO0C00660p KLLA0E07349p KLLA0D14421p KLLA0C14113p KLLA0C14091p KLLA0C07238p KLLA0B05808p KLTH0G17732p KLTH0F19096p KLTH0F12474p KLTH0B09834p KLTH0B09812p SAKL0H05236p SAKL0H00550p SAKL0H00528p SAKL0F05456p SAKL0C13024p SAKL0B04180p ZYRO0G04268p ZYRO0D06952p ZYRO0C02926p ZYRO0A12540p ZYRO0A06204p CAGL0M13849p CAGL0G01056p CAGL0G00286p CAGL0F03883p CAGL0F01287p CAGL0E01595p SACE0O03124p SACE0O00836p SACE0M10406p SACE0M08228p SACE0L15267p
Search in: Génolevures Google

Homologs in protein family: GL3R0042
Orthologs: strict determination not possible; homologs must be refined manually

Protein YALI0D06039p

similar to uniprot|P22146 Saccharomyces cerevisiae YMR307w GAS1 glycophospholipid-anchored surface glycoprotein; SubName: Full=YALI0D06039p;

Protein domain map

Protein length: 552 amino acids
Protein family: GL3R0042

Database cross references:
Gene3D: G3DSA:3.20.20.80
InterPro: IPR004886
InterPro: IPR012946
InterPro: IPR013781
InterPro: IPR017853
KEGG: yli:YALI0D06039g
Pfam: PF03198
Pfam: PF07983
RefSeq: XP_502469.1
SMART: SM00768
UniProtKB/TrEMBL: Q6CA43
UniProtKB: Q6CA43_YARLI

Phylogeny

PhylomeDB:YALI0D06039g

Computed results for YALI0D06039p

Blastp Genolevures

Blastp Uniprot

Gene Ontology terms

Sequence data

>YALI0D06039g.nt
ATGAAGTTCTCAGCGGTCTCAATCGCTGCTGCCCTGGCCTCGCTGGTGGCAGCAGCAGAC
GTGCCCTCTATTGACATTGTGGGCAACAAGTTCTTCTACTCCAACAACGGCTCTCAATTC
TACATCCGAGGAGTGGCCTACCAGCAGGACTCGGCCAACGAGACAGCCAAGGAGACCTTT
TCGGACCCTCTGTCGGACGGCGACGCCTGTAAGCGAGACCTGCCCTACCTGGTGCAGCTC
AAGACCAACGTGCTTCGAGTGTACGCCATCGACACCACCAAGGACCACGACACATGCATG
CAGCTCTTCAACGACGCCGGCATCTACGTCATTTCCGATCTCTCACAGCCCGGCGAGTCC
ATCAACCGAAACTCGCCCTCGTGGGACGTGGATCTGTACCAGCGATACACCAGCGTAGTG
GACACCATGCAAAAGTACCCCAACATGCTGGGTTTCTTTGCCGGAAACGAGGTCACTAAC
AACAACACCAACACCGATGCGTCTCCCTACGTCAAGGCTGCCATCCGAGACATGAAGTCG
TACATGAAGGAGAAGTCGTACCGATCCATTCCCGTCGGATACGCCACCAACGATGACGAG
AAGACCCGAGACGACCTGGCCACCTATTTCCAGTGCGGCAACGCCTCCGAGGCAGCCGAT
TTCTACGGAATCAACATCTACGAGTGGTGTGGAGACGCCACCTTTGAGTCCTCCGGTTAC
CAGCAGCGAACCGAGGAGTACAAGAACTTCACCATCCCCATCTTCTTCTCCGAGTACGGC
TGCAACCGAGTCAAGCCGCGACAGTTCTCCGACGTGCCCGTTCTGTTTGGCCCCAACATG
ACCGACGTCTGGTCCGGAGGAATCGTCTACATGTACTTTGAGGAGCAGAACCAGTACGGT
CTGGTGTCTGTTTCCGGAAGCTCCGTCTCCACTCTCGACGACTTCAACAACCTGTCTTCG
CAGATGGCTAAGATTTCTCCTTCCTCCGCCAACACCAACGACTACAAGCCCTCTCAGACC
GCTGGTGGCGTCTCGTGCCCCGACTTCAACGCCAACTGGAAAGGCTCTCCCACCCTGCCT
CCCACCCCCAAGGTCGGAACCTGTCAGTGCATCAACGATGGCTCTTCTTGTGTCGTCAAC
TCGGACACTAACGCCAAGAACTACGGCGATCTCTTTGGAGAGCTGTGCGGTAACCTCGAT
GTGGACTGCTCCGAGATCCAGTCCAACGGAACCTCCGGCAAGTACGGAGACCTGTCCTTC
TGTGACGCCAAGCAGAAGCTCAACTTCCTCATGGGCAAGTACTACGACTCCCAGAACGGC
AACTCTCAGGCCTGCGACTTTTCTTCCCAGGCCTCCATTGTCCAGAGCCCCAAGACCGGA
TCCAACTGCCAGAACGCCCAGGCCACTGCTGTCTCTTCCGGCTCGTCCGGCTCTTCCGGC
TCGTCCGGCTCTGGATCTTCGGGCTCTGGATCGTCCGGATCCTCGGGCTCTGGCTCGGGC
TCTGCTAAGGGCTCTGCTGCTGCCGCTGCCTCTGGCTCGGCCGCCGCCTCGTCCTCCAAG
GGCGGAAACAAGAAGAGCGCCGGCGCCTCGCTGGCTGCCGAGAAGGTGGTTGCCTCCGTC
GTGTTTGGCGCCATCGCCATCATGGCCGTTATTGTTTAA

>YALI0D06039g.cds
ATGAAGTTCTCAGCGGTCTCAATCGCTGCTGCCCTGGCCTCGCTGGTGGCAGCAGCAGAC
GTGCCCTCTATTGACATTGTGGGCAACAAGTTCTTCTACTCCAACAACGGCTCTCAATTC
TACATCCGAGGAGTGGCCTACCAGCAGGACTCGGCCAACGAGACAGCCAAGGAGACCTTT
TCGGACCCTCTGTCGGACGGCGACGCCTGTAAGCGAGACCTGCCCTACCTGGTGCAGCTC
AAGACCAACGTGCTTCGAGTGTACGCCATCGACACCACCAAGGACCACGACACATGCATG
CAGCTCTTCAACGACGCCGGCATCTACGTCATTTCCGATCTCTCACAGCCCGGCGAGTCC
ATCAACCGAAACTCGCCCTCGTGGGACGTGGATCTGTACCAGCGATACACCAGCGTAGTG
GACACCATGCAAAAGTACCCCAACATGCTGGGTTTCTTTGCCGGAAACGAGGTCACTAAC
AACAACACCAACACCGATGCGTCTCCCTACGTCAAGGCTGCCATCCGAGACATGAAGTCG
TACATGAAGGAGAAGTCGTACCGATCCATTCCCGTCGGATACGCCACCAACGATGACGAG
AAGACCCGAGACGACCTGGCCACCTATTTCCAGTGCGGCAACGCCTCCGAGGCAGCCGAT
TTCTACGGAATCAACATCTACGAGTGGTGTGGAGACGCCACCTTTGAGTCCTCCGGTTAC
CAGCAGCGAACCGAGGAGTACAAGAACTTCACCATCCCCATCTTCTTCTCCGAGTACGGC
TGCAACCGAGTCAAGCCGCGACAGTTCTCCGACGTGCCCGTTCTGTTTGGCCCCAACATG
ACCGACGTCTGGTCCGGAGGAATCGTCTACATGTACTTTGAGGAGCAGAACCAGTACGGT
CTGGTGTCTGTTTCCGGAAGCTCCGTCTCCACTCTCGACGACTTCAACAACCTGTCTTCG
CAGATGGCTAAGATTTCTCCTTCCTCCGCCAACACCAACGACTACAAGCCCTCTCAGACC
GCTGGTGGCGTCTCGTGCCCCGACTTCAACGCCAACTGGAAAGGCTCTCCCACCCTGCCT
CCCACCCCCAAGGTCGGAACCTGTCAGTGCATCAACGATGGCTCTTCTTGTGTCGTCAAC
TCGGACACTAACGCCAAGAACTACGGCGATCTCTTTGGAGAGCTGTGCGGTAACCTCGAT
GTGGACTGCTCCGAGATCCAGTCCAACGGAACCTCCGGCAAGTACGGAGACCTGTCCTTC
TGTGACGCCAAGCAGAAGCTCAACTTCCTCATGGGCAAGTACTACGACTCCCAGAACGGC
AACTCTCAGGCCTGCGACTTTTCTTCCCAGGCCTCCATTGTCCAGAGCCCCAAGACCGGA
TCCAACTGCCAGAACGCCCAGGCCACTGCTGTCTCTTCCGGCTCGTCCGGCTCTTCCGGC
TCGTCCGGCTCTGGATCTTCGGGCTCTGGATCGTCCGGATCCTCGGGCTCTGGCTCGGGC
TCTGCTAAGGGCTCTGCTGCTGCCGCTGCCTCTGGCTCGGCCGCCGCCTCGTCCTCCAAG
GGCGGAAACAAGAAGAGCGCCGGCGCCTCGCTGGCTGCCGAGAAGGTGGTTGCCTCCGTC
GTGTTTGGCGCCATCGCCATCATGGCCGTTATTGTTTAA

>YALI0D06039g.aa
MKFSAVSIAAALASLVAAADVPSIDIVGNKFFYSNNGSQFYIRGVAYQQDSANETAKETF
SDPLSDGDACKRDLPYLVQLKTNVLRVYAIDTTKDHDTCMQLFNDAGIYVISDLSQPGES
INRNSPSWDVDLYQRYTSVVDTMQKYPNMLGFFAGNEVTNNNTNTDASPYVKAAIRDMKS
YMKEKSYRSIPVGYATNDDEKTRDDLATYFQCGNASEAADFYGINIYEWCGDATFESSGY
QQRTEEYKNFTIPIFFSEYGCNRVKPRQFSDVPVLFGPNMTDVWSGGIVYMYFEEQNQYG
LVSVSGSSVSTLDDFNNLSSQMAKISPSSANTNDYKPSQTAGGVSCPDFNANWKGSPTLP
PTPKVGTCQCINDGSSCVVNSDTNAKNYGDLFGELCGNLDVDCSEIQSNGTSGKYGDLSF
CDAKQKLNFLMGKYYDSQNGNSQACDFSSQASIVQSPKTGSNCQNAQATAVSSGSSGSSG
SSGSGSSGSGSSGSSGSGSGSAKGSAAAAASGSAAASSSKGGNKKSAGASLAAEKVVASV
VFGAIAIMAVIV*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

YALI0D06039g

YALI0D06039g

Genomic environment map

Computed results

Homologs and Orthologs

Protein YALI0D06039p

Protein domain map

Phylogeny

Computed results for YALI0D06039p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes