HomeYALI0D04851g
similar to uniprot|Q08193 Saccharomyces cerevisiae YOL030w GAS5 1,3-beta-glucanosyltransferase, has similarity to Gas1p
Element type: CDS
Element length: 1419 nucleotides,
on sense strand of
Yali0D: 612882..614300.
Other names:
YALI-CDS2574.1
YALI-IPF4932
Coding sequence: 473 codons.
Element length: 1419 nucleotides,
on sense strand of
Yali0D: 612882..614300.
Other names:
YALI-CDS2574.1
YALI-IPF4932
Coding sequence: 473 codons.
Database cross references:
EMBL: CR382130
GeneID: 2910657
HOGENOM: Q6CA92
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382130
GeneID: 2910657
HOGENOM: Q6CA92
Homologs and Orthologs
Homologs in protein families: GL3R0042 GL3R0042.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0D04851p 
similar to uniprot|Q08193 Saccharomyces cerevisiae YOL030w strongly similar to glycoprotein Gas1P
Protein domain map
Database cross references:
Gene3D: G3DSA:3.20.20.80
InterPro: IPR004886
InterPro: IPR013781
KEGG: yli:YALI0D04851g
Pfam: PF03198
RefSeq: XP_502420.1
UniProtKB/TrEMBL: Q6CA92
UniprotKB: Q6CA92_YARLI
Gene3D: G3DSA:3.20.20.80
InterPro: IPR004886
InterPro: IPR013781
KEGG: yli:YALI0D04851g
Pfam: PF03198
RefSeq: XP_502420.1
UniProtKB/TrEMBL: Q6CA92
UniprotKB: Q6CA92_YARLI
Gene Ontology terms
| GO:0043169 | cation binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0003824 | catalytic activity |
Sequence data
Nucleotide sequence
>YALI0D04851g.nt GCGAGTCGAACCGAATGCCGGTCAAAGTTTAGAGCCCGGTTATGTTTTGCCTCATTGGGT TTAAACACCGCAAAACAGGGTTGTACAAGGTGCAAAACTGCGCCTCAGGGGAAGGGGGAG ATGGGGGGGGATGGAACGAGAAAAAAACCGAGCCAAAAGAGGCAAGGTGATGGGTTGGCG GTCCATGGGTGAAATGATGCCATTTAATCGGCGCAATGGCTTATTTGGACGGTATTTCAC CCCCATGGCGTCCCCTCAGTCAACACTCCCTACACGGCTATATAAGCATATTATTAGGCA TAAGATAGAGTGTGGTACGACTTCTCTTTTCTCGTTGTTGGGAGTAGTAAGTATTTCTGA GAACCTCAAGTAACTTTAACACTGCAAGGGTGTTTGAGGGGCAAGGGGTAACTCGAGGAT GAGGCGGATTATTGGGGTTTTAAGACATGCTCTGAGATCCTATGAACGGTATCATGGTAC CAAGGCATATTCTGTGCCCATTTCACACCCAGAGCCATCCCCACACTCCTCATCTCTTCA AACTAAATATAGAACATACGCGACTCCACGTCCACGACTTGTGCTTGAACTGTAAATCTG AGTTTGTACTTAGAGTTTGGACAACTGGGAGGAGCGAGGCTGTGGTGATGATATTTTACT AGTCAATATAGGGCGTGGTGTTATTGATCAAGGAGAAAAGTAAACAAATCCGCGATTGGC CGACAACCACATGACTTCAAGAGACCCCAAATACACACGCACCGTCCTCAATCAAGCCCT CTGCCATCCGCGTAGGACCTCCTTTGCAGAATCCCTCCGCCTCCCTGCCTCTAAACTTAG ATTAAATCGGAATGTTGGTGTCTTGGCAAAACAAGTGTGTTGCACGGAGAGCTCCTACCA ACCGCACCATGTACATGTGCATGTATAAATATATAGTGGGCGCCAGCTGCTGCTCTCTTT TTCTCTCTTTCTTCCAAAGTAACGCTTCAACGCTCCGACTATGAAATTCTCCACTCTCTC CGTTGCTGCTGCTCTGGCCGCCTCTGCCTCTGCTGCTCTCGACCCCGTTGAGGTCAAGGG CAACGCCTTCTTCGTGGGCGACAAGCGATTCTACATCAAGGGTATCGACTACCAGCCCGG TGGATCTTCCAAGGTCGTTGACCCTCTGGCTGACCCCAAGATTTGCAACCGAGACATTAA GTGGTTCAAGGACCTCGGTGTCAACGCCGTGCGAATCTACACTGTTGACAACTCCGCTGA CCACAGCGAGTGCATGAAGGCTCTCGACGATGCTGGCATCTACCTGATCCTCGACGTCAA CACTCCCCTCATCTCCGTCAACCGAGCCAAGCCCTACGAGTCGTACAACGCCGCCTACCT GCAGCACGTGTTCGCTACCATCGACACCTTCAAGGACTACTCCAACACCCTTGGATTCTT TGCTGCCAACGAGGTCATCAACGCCAAGAACAACACCAACACCGCCCCCGTCATCAAGGC CGTCGTCCGAGACATGAAGGAGTACATCAAGAACCAGGCCAAGCGAAAGATCCCCGTTGG ATACTCCGCTGCTGACGTTTCTGAGAACCGATACGAGATGGCCCAATACTTCAACTGTGG CCCCGAGGAGGAGCGAATTGACATGCTCGGTATGAACGATTACTCGTGGTGCGGAAACTC CACCTACGAGGAGTCCGACTACGAGGCCAAGGTCAAGGCCTACGGCAACTACTCCATCCC CATTTTCCTGTCCGAGTTTGGCTGCAACGAGATCCGACACAACGCCAAGGGAAACCCCGA GCGGCCCTTCACTGAGATTGAGACCCTGTACTCCGACAAGATGACCCCCGTCTTCTCTGG TGGTCTGGTCTACGAGTACTCTCAGGAGTCCAACGATTACGGTATTGTCAAGATCGACGG CGACTCCGTCTCCAAGTTTAACGGCGAGTTCGACATCATCAAGGCTGCCTTTGCCAAGGC CAACCCCCAGGGTGACGGTGGATACAAGAAGGATGGCAAGTCCTCCACTTGTCCTGCTCG ATCCAACACCTGGGAGGGTGATGGACCCATTCCCGGCATTGTTCCCCGAGCTAAGGACTA CATGAAGAACGGTGCTGGCAAGCCCGAGGGTCTGTCTCAGCAGTCCACCCAGGAGGGTGA CTCTCACGAGTCCGGTCTCGACACCATTGGCAACAAGGACCCCAAAGAGTCTGATCCTGA CTCCAACAAGTCCGACTCCTCTTCTTCCGGCTCTTCCGGATCTTCCAGCTCTGCTTCCTC CTCCGGCTCTGCCTCTGGTTCTGCCTCTTCTGCCTCTTCCACTGCCTCTGGCTCTTCTGG CAGCCAAAACTCCGCTGCTGCCAACGCCCCCGCTGCCGGCGTTCTTGCTGCTGCCGCCAT CATGGCCGCTCTTTTGTAAACAAATTAATTTATTTTAGATGAGCACGGCACCCCGCCACC ATGATATAGATGATTTATATATTAATACACGAGATGATTTACGGTGATACTTTTAGAGCG CGAGAGCAGCTTGTACTCGTACTGGGATTGAACTAAAAAGATGCGCCAATCAACTACAGT ATTATGGTAGAAACGAAAATACTCACTTCTCCAATTGGAGAAAATCCTTCATTTTCACTC TGAATGTCAGTTCATGAACGACCTGATTGGGCTGCCAACTGTTCACTGTCCGCGTCACGT CAAATTGCCTTCAAACAAA
Coding sequence
>YALI0D04851g.cds ATGAAATTCTCCACTCTCTCCGTTGCTGCTGCTCTGGCCGCCTCTGCCTCTGCTGCTCTC GACCCCGTTGAGGTCAAGGGCAACGCCTTCTTCGTGGGCGACAAGCGATTCTACATCAAG GGTATCGACTACCAGCCCGGTGGATCTTCCAAGGTCGTTGACCCTCTGGCTGACCCCAAG ATTTGCAACCGAGACATTAAGTGGTTCAAGGACCTCGGTGTCAACGCCGTGCGAATCTAC ACTGTTGACAACTCCGCTGACCACAGCGAGTGCATGAAGGCTCTCGACGATGCTGGCATC TACCTGATCCTCGACGTCAACACTCCCCTCATCTCCGTCAACCGAGCCAAGCCCTACGAG TCGTACAACGCCGCCTACCTGCAGCACGTGTTCGCTACCATCGACACCTTCAAGGACTAC TCCAACACCCTTGGATTCTTTGCTGCCAACGAGGTCATCAACGCCAAGAACAACACCAAC ACCGCCCCCGTCATCAAGGCCGTCGTCCGAGACATGAAGGAGTACATCAAGAACCAGGCC AAGCGAAAGATCCCCGTTGGATACTCCGCTGCTGACGTTTCTGAGAACCGATACGAGATG GCCCAATACTTCAACTGTGGCCCCGAGGAGGAGCGAATTGACATGCTCGGTATGAACGAT TACTCGTGGTGCGGAAACTCCACCTACGAGGAGTCCGACTACGAGGCCAAGGTCAAGGCC TACGGCAACTACTCCATCCCCATTTTCCTGTCCGAGTTTGGCTGCAACGAGATCCGACAC AACGCCAAGGGAAACCCCGAGCGGCCCTTCACTGAGATTGAGACCCTGTACTCCGACAAG ATGACCCCCGTCTTCTCTGGTGGTCTGGTCTACGAGTACTCTCAGGAGTCCAACGATTAC GGTATTGTCAAGATCGACGGCGACTCCGTCTCCAAGTTTAACGGCGAGTTCGACATCATC AAGGCTGCCTTTGCCAAGGCCAACCCCCAGGGTGACGGTGGATACAAGAAGGATGGCAAG TCCTCCACTTGTCCTGCTCGATCCAACACCTGGGAGGGTGATGGACCCATTCCCGGCATT GTTCCCCGAGCTAAGGACTACATGAAGAACGGTGCTGGCAAGCCCGAGGGTCTGTCTCAG CAGTCCACCCAGGAGGGTGACTCTCACGAGTCCGGTCTCGACACCATTGGCAACAAGGAC CCCAAAGAGTCTGATCCTGACTCCAACAAGTCCGACTCCTCTTCTTCCGGCTCTTCCGGA TCTTCCAGCTCTGCTTCCTCCTCCGGCTCTGCCTCTGGTTCTGCCTCTTCTGCCTCTTCC ACTGCCTCTGGCTCTTCTGGCAGCCAAAACTCCGCTGCTGCCAACGCCCCCGCTGCCGGC GTTCTTGCTGCTGCCGCCATCATGGCCGCTCTTTTGTAA
Predicted translation product
>YALI0D04851g.aa MKFSTLSVAAALAASASAALDPVEVKGNAFFVGDKRFYIKGIDYQPGGSSKVVDPLADPK ICNRDIKWFKDLGVNAVRIYTVDNSADHSECMKALDDAGIYLILDVNTPLISVNRAKPYE SYNAAYLQHVFATIDTFKDYSNTLGFFAANEVINAKNNTNTAPVIKAVVRDMKEYIKNQA KRKIPVGYSAADVSENRYEMAQYFNCGPEEERIDMLGMNDYSWCGNSTYEESDYEAKVKA YGNYSIPIFLSEFGCNEIRHNAKGNPERPFTEIETLYSDKMTPVFSGGLVYEYSQESNDY GIVKIDGDSVSKFNGEFDIIKAAFAKANPQGDGGYKKDGKSSTCPARSNTWEGDGPIPGI VPRAKDYMKNGAGKPEGLSQQSTQEGDSHESGLDTIGNKDPKESDPDSNKSDSSSSGSSG SSSSASSSGSASGSASSASSTASGSSGSQNSAAANAPAAGVLAAAAIMAALL*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0D04851p