YALI0C19624g


similar to uniprot|P38071 Saccharomyces cerevisiae YBR026c (MRF1) mitochondrial respiratory function protein

Genomic environment map

Element type: CDS
Element length: 1131 nucleotides,
on anti-sense strand of
Yali0C: complement(2662343..2663473).
Other names:
YALI-CDS3506.1
YALI-IPF6790
Coding sequence: 377 codons.
Database cross references:
EMBL: CR382129
GeneID: 2909944
GenomeReviews: CR382129_GR
HOGENOM: HBG753318

Computed results  

None available yet


Homologs and Orthologs

Homologs in protein family: GL3C0928
Orthologs: strict determination not possible; homologs must be refined manually

Protein YALI0C19624p  


similar to uniprot|P38071 Saccharomyces cerevisiae YBR026c (MRF1) mitochondrial respiratory function protein; RecName: Full=Probable trans-2-enoyl-CoA reductase, mitochondrial; EC=1.3.1.38; Flags: Precursor;

Protein domain map

Protein length: 376 amino acids
Protein family: GL3C0928
Database cross references:
Gene3D: G3DSA:3.40.50.720
InterPro: IPR002085
InterPro: IPR011032
InterPro: IPR013149
InterPro: IPR016040
KEGG: yli:YALI0C19624g
PANTHER: PTHR11695
Pfam: PF00107
RefSeq: XP_502018.1
UniProtKB/Swiss-Prot: Q6CBE4
UniProtKB: ETR1_YARLI

Computed results for YALI0C19624p  

Blastp Genolevures
Blastp Uniprot

Gene Ontology terms  


Sequence data  


Nucleotide sequence    

>YALI0C19624g.nt
ATGCTACGAACACTTCGAACCTCTCAATTGGCACGATCCGGCTTTGGAACGCCCTCTTTT
GGTCTGCGATTTAACTCCGTTGGCCGGGCGTTTGTCTTCTCCCAAACTGGCGAGCCCAAG
GACGTGATCCAGGTGCTGGAGTATCCCATTGAGAAGCCTCTGGAGAACCAGGTGCTGCTT
AAGTCGCTCGGATTCACTATCAACCCGGCTGACATTAACCAATTGGAGGGCGTTTATCCC
TCTGTGCCTCCCAAATCCGTCCAGATCAACAACGAAGACGCTGCTATTGGAGGCAACGAG
GGTCTGTTCCAGGTGCTTGATCCCGGTGCCAAGTCTGGACTGAAGAAGGGCGACTGGGTT
CTTCCTCGAAAGACATGCTTTGGAACCTGGCGATCACATGCTCTGGTGGAGGCTGACACC
GTTGTGAAGATTGACAACACTGATCTCACCAAGGTGCAGGCTACCACTGTGTCTGTTAAC
CCCTCTACTGCTTACGAGATGCTCAAGGACCTCAAGGAGGGCGACTGGTTCATTCAGAAC
GGTGGTAACAGCGGTGTTGGGCGAGCAGCTATTCAGATTGGCCACATCCGAGGTCTCAAG
AGCATCTCTGTGGTCAGAGATCGTCCTGATCTCGAAGTGCTCAAGAAGGAACTCACCGAT
CTGGGCGCCACCCACGTAATCACTGAGGAGGAGGCCTCGGATAAGTTGTTTTCCAAGCAG
ATCAAGTCCTGGACCGGCGGAAAGATTAAGCTGGCTCTCAACTGTATTGGAGGAAAGAGC
GCCACTTCCATCATGCGACAGCTGGGAGCCGGAGGATCCATTGTCACTTACGGAGGCATG
TCTAAGAAGCCTCTTACGTTCCCCACTGGCCCTTTTATCTTCAAGGACATCACTGCCAAG
GGCTACTGGCTGACTCGATGGGCCGATAAGCACCCTGAAGAGAAGGCTAAGACCATTGAG
AACATCTTCAAGTTCTACCGAGAAAAGAAGTTTGTGGCTCCTCCCGTTAACATTTCGACT
CTGGACTTCAGCAAGGGTAACGACGTTGTTCTGTCCGAGTTTTTGGACGCCCTTGGAAAG
GCTCAGAAGGGCGGAGGTAAGAAGCAGCTGGTTCAGTGGGTGGAGTACTAG

Coding sequence    

>YALI0C19624g.cds
ATGCTACGAACACTTCGAACCTCTCAATTGGCACGATCCGGCTTTGGAACGCCCTCTTTT
GGTCTGCGATTTAACTCCGTTGGCCGGGCGTTTGTCTTCTCCCAAACTGGCGAGCCCAAG
GACGTGATCCAGGTGCTGGAGTATCCCATTGAGAAGCCTCTGGAGAACCAGGTGCTGCTT
AAGTCGCTCGGATTCACTATCAACCCGGCTGACATTAACCAATTGGAGGGCGTTTATCCC
TCTGTGCCTCCCAAATCCGTCCAGATCAACAACGAAGACGCTGCTATTGGAGGCAACGAG
GGTCTGTTCCAGGTGCTTGATCCCGGTGCCAAGTCTGGACTGAAGAAGGGCGACTGGGTT
CTTCCTCGAAAGACATGCTTTGGAACCTGGCGATCACATGCTCTGGTGGAGGCTGACACC
GTTGTGAAGATTGACAACACTGATCTCACCAAGGTGCAGGCTACCACTGTGTCTGTTAAC
CCCTCTACTGCTTACGAGATGCTCAAGGACCTCAAGGAGGGCGACTGGTTCATTCAGAAC
GGTGGTAACAGCGGTGTTGGGCGAGCAGCTATTCAGATTGGCCACATCCGAGGTCTCAAG
AGCATCTCTGTGGTCAGAGATCGTCCTGATCTCGAAGTGCTCAAGAAGGAACTCACCGAT
CTGGGCGCCACCCACGTAATCACTGAGGAGGAGGCCTCGGATAAGTTGTTTTCCAAGCAG
ATCAAGTCCTGGACCGGCGGAAAGATTAAGCTGGCTCTCAACTGTATTGGAGGAAAGAGC
GCCACTTCCATCATGCGACAGCTGGGAGCCGGAGGATCCATTGTCACTTACGGAGGCATG
TCTAAGAAGCCTCTTACGTTCCCCACTGGCCCTTTTATCTTCAAGGACATCACTGCCAAG
GGCTACTGGCTGACTCGATGGGCCGATAAGCACCCTGAAGAGAAGGCTAAGACCATTGAG
AACATCTTCAAGTTCTACCGAGAAAAGAAGTTTGTGGCTCCTCCCGTTAACATTTCGACT
CTGGACTTCAGCAAGGGTAACGACGTTGTTCTGTCCGAGTTTTTGGACGCCCTTGGAAAG
GCTCAGAAGGGCGGAGGTAAGAAGCAGCTGGTTCAGTGGGTGGAGTACTAG

Predicted translation product    

>YALI0C19624g.aa
MLRTLRTSQLARSGFGTPSFGLRFNSVGRAFVFSQTGEPKDVIQVLEYPIEKPLENQVLL
KSLGFTINPADINQLEGVYPSVPPKSVQINNEDAAIGGNEGLFQVLDPGAKSGLKKGDWV
LPRKTCFGTWRSHALVEADTVVKIDNTDLTKVQATTVSVNPSTAYEMLKDLKEGDWFIQN
GGNSGVGRAAIQIGHIRGLKSISVVRDRPDLEVLKKELTDLGATHVITEEEASDKLFSKQ
IKSWTGGKIKLALNCIGGKSATSIMRQLGAGGSIVTYGGMSKKPLTFPTGPFIFKDITAK
GYWLTRWADKHPEEKAKTIENIFKFYREKKFVAPPVNISTLDFSKGNDVVLSEFLDALGK
AQKGGGKKQLVQWVEY*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites