HomeYALI0C06798g
similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3 Glycogen branching enzyme, involved in glycogen accumulation
Element type: CDS
Element length: 2076 nucleotides,
on anti-sense strand of
Yali0C: complement(905683..907758).
Other names:
YALI-CDS1193.1
YALI-IPF6487
Coding sequence: 692 codons.
Element length: 2076 nucleotides,
on anti-sense strand of
Yali0C: complement(905683..907758).
Other names:
YALI-CDS1193.1
YALI-IPF6487
Coding sequence: 692 codons.
Database cross references:
EMBL: CR382129
GeneID: 2909223
HOGENOM: Q6CCT1
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382129
GeneID: 2909223
HOGENOM: Q6CCT1
Homologs and Orthologs
Homologs in protein families: GL3R2291 GL3R2291.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0C06798p 
similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3 1 4-glucan branching enzyme (glycogen branching enzyme)
Protein domain map
Database cross references:
Gene3D: G3DSA:2.60.40.10
Gene3D: G3DSA:2.60.40.1180
Gene3D: G3DSA:3.20.20.80
InterPro: IPR004193
InterPro: IPR006047
InterPro: IPR006048
InterPro: IPR013780
InterPro: IPR013781
InterPro: IPR013783
KEGG: yli:YALI0C06798g
Pfam: PF00128
Pfam: PF02806
Pfam: PF02922
RefSeq: XP_501531.1
UniProtKB/Swiss-Prot: Q6CCT1
UniprotKB: GLGB_YARLI
Gene3D: G3DSA:2.60.40.10
Gene3D: G3DSA:2.60.40.1180
Gene3D: G3DSA:3.20.20.80
InterPro: IPR004193
InterPro: IPR006047
InterPro: IPR006048
InterPro: IPR013780
InterPro: IPR013781
InterPro: IPR013783
KEGG: yli:YALI0C06798g
Pfam: PF00128
Pfam: PF02806
Pfam: PF02922
RefSeq: XP_501531.1
UniProtKB/Swiss-Prot: Q6CCT1
UniprotKB: GLGB_YARLI
Gene Ontology terms
None available yet
Sequence data
>YALI0C06798g.nt CCTAGCACCTGATGACCCCTCAATTGTCCTCCACTGGACTCTACTTCCGCCAACGCTAGC GCCTGTACGGCTGAGCTTAGTGTGCCTGTGTGGAGCCCTTTCTGCGTGAGTGCTGTCAGA ACTGCTTGCAGCGTTGTAGAGGAGACCAAACAAGCCGTCGGACACGGGAGACATGACGAG CTGCTACAAATAGAGATGAAAGAAGTTCGTTGTTTTTTTCGTTCCGGCTCCTCTGTGAGA CTCGCATCGTATACACTATCCGTGGAGCTTCAGTCGGTAGTTTCTTTTTGATCAGGTGTA CGTTCACTCCGGAGCATACGGGGCTCATGAGTTAGTTGTACGAGTTGGTGGGGTGACCAA GAGTACGACTGGACTTGTCTAAAAGCTTGTGCGGTGGCTGTGAGAACAAAAATGGTGATT TATTGGTTGGCAGCAGATTGTTCTTTCGAACAACACACACCATGTCTCTACCGCACCCGT ACAAGTATAAATAGGTCACTTTCGCCCCCCCCTCATCGGCCGGAAAAATTACCATACTTC CAGCATGCTGCGCTTCTGTTGGGACAGCAATCTCGTATATCAGCAACCTTAATGGGATGC ATGAAGCCTCGGCCAAAGCACCGAGTGGAGCTGCTATCTTTGCCAATGAGCGGTATATCG GCATGGAAGGAATTGGACAGTGGATTTTGTGGTCTAAAATTTGCAATTCAGTCTCCTTTC TAGCCCTTTCCACTCTCAGTGAGGCATTATATACCCCCCTCCAAAGTTACCCTATTACAG ATTCCATGTCCTCTTTAGACTTCCCCTCCCAGCCCCAGCCATATGGGCCGATGGGCGACA TATATCACTGCACGTTGAACCACCTACTTGTGACAGCCAATTGATTGATCGACTTCAGCA AAATCCAATTGAGAAATCGAGACGATAAAAACAACACGTCATTGCATACAAACCAGACTC CACATCTACACCACCACAACCACCACACCCACCACCAACCATGACACTACAAGTTTGCAA AGACGATCCTTGGCTCAAACCATTCGAGGAGGAACTCCTTCGACGACAAGCCCTAGTGGG CCAGTGGAAGGACCATTTTGCCAAGGAGGGAGGTCTTGCTGAGTTTGCAGCCTCCTATAA ACGATACGGACTCCATGTCAACAAGGACAACTCGGTCACCTACAGAGAGTGGGCTCCAGG AGCCTCCGAAGCAGTTCTAACCGGCGACTTCAACGGCTGGGACAGACAACAGTACCACAT GACCAGAGACGAGTATGGACTGTGGAGCGTGACTGTGCCTCCTACCTCAGATGGTCAGGT GGCAATCCCCCATAACTCCAAGGTCAAGCTTGCTCTGAAGACCTCCAACGGTCAATGGGT CGATCGACTGCCTGCCTGGTCCACCTACGTCGTCCAGGACCTGTCCAAATCGCCCATCTA TGAGGCTGTGTTCTGGAACCCTCCCGAGTCGGAAAAGTACCAGTGGAAGAACAAATCTCC CCCCACTCCTGCCAACGCCCAAATCTACGAAGCCCACGTGGGTATCTCCTCCAGCGAACC TCGAGTCGGCACTTACAAGGAGTTTACAAAGAACATTCTCCCTCGAATCCACAAACTGGG CTACAACGTGATCCAGCTCATGGCCATCATGGAACACGCCTACTACGCCTCCTTTGGCTA CCAGGTCACCTCCTTCTACGCTATTTCGTCCCGATATGGTACTCCAGAGGACCTCAAGGA GCTCATTGACACCGCTCACGGTATGGGTATTACTGTTCTTCTGGATGTTGTGCACTCTCA TGCTTGCAAAAACGTCGATGACGGTCTCAACAACTTTGATGGAACTGACCACCAGTACTT CCATGGTGGAGCAAAGGGAGACCATCCTCAGTGGGACTCAAAGCTGTTTGATTACGGAAA GTACGAGGTTCTTCGGTTCTTGCTGTCCAACCTGCGGTTCTATATTGAGGAGTACCACTT TGACGGCTTCCGGTTTGACGGAGTCACCTCTATGCTCTACAAGCATCATGGTCTCGGTAC CGGCTTCTCCGGTGGCTACCATGAGTACTTTGGAGACGAACATGTTGATCAGCAGGCCGT TGTTTATCTCATGTTGGCTCACGAGCTCATGAGGGAGCTGCAACCTCTTCTTCGACCCGG AGAAGATGCAGGCAACTTCCTCTCCATCGCCGAAGATGTGTCTGGAATGCCTGCTCTCTG TAGACCTGTTTCTGAGGGAGGTGTTGGCTTTGACTACCGTCTGGCCATGGCTATTCCCGA CATGTGGATCAAGCTCGTCAAGGAGACCCGAGACGAGGACTGGGACATGGGCAACATTGT TTTTACTTTGACCAACCGTCGTCATCGAGAAAAGACCATTGCTTATGCTGAGTCTCATGA TCAGGCTCTGGTTGGAGACAAAACTCTGGCCTTCTGGCTCATGGATAAGGAAATGTACAC CTCCATGTCTGTTCTTTCCGACCCCAACCCCATCATTGACCGAGGAATCGCTCTCCACAA GATGATTCGACTCATCACCCATTCTCTTGGAGGAGAAGGATACCTCAACTTTGAGGGTAA CGAGTTTGGACACCCTGAGTGGCTGGACTTCCCTCGAGAGGGCAATGGCTCCTCTTTCCA CTACTGTCGACGACAGTGGCCTGTGGTGGATGACAAGCTGTTGAGATACCAGCATCTTAA TGAATTCGATGCCGCCATGCAGCACCGAGGAGACCACTACGGCTGGCTGTCGGCCGACCA GGCTTACGTGTCGTTGAAGAACGAGGACGACAAGGTGGTTGTGTATGAGCGAGCTGGTCT GGTGTTTGTCTTCAACTTCCACCCCAACAAGTCGTTCACTGACTACAGAATCGGTGTGGA CCAGCCTGGAACATACACCCTTGTGTTGGATTCTGATTCTCCCGAGTTTGGAGGTTTTGG CCGAATCGACCACGAAAAGACCCGATGCCATACCGAGCCTCTGGAGTGGAACGGACGGGC TAACTGTATGCATATCTACATTCCTTCTCGAGTGGCTCTGGTGTTTGCCCGGGAGGATGA CCCTAGACGAAAGTAAGTAGTGACAAGCCAACAATGGCGAAGAGCGTCGCTGGGCTAAAG TCACTACCGCAAGGCATTCAGGATGAAAAGCACTTCTGTTTTTTATTATTATTTGATTTC GAACATTATATTGTAGACACAAAGCTATTGCCATCATGAAAGGATTGATGTAAAACCTAC TGTACGTACTTGTAGATATTGTATGTACAGTATGTACGAGTACATACTGTACTTTTCATT AGTGTGTCTAGTTGTCTCTACATACTAATAATGAGTTAGTGGAGATATCTACATCCGTAT TTACATCGACCGCGGT
>YALI0C06798g.cds ATGACACTACAAGTTTGCAAAGACGATCCTTGGCTCAAACCATTCGAGGAGGAACTCCTT CGACGACAAGCCCTAGTGGGCCAGTGGAAGGACCATTTTGCCAAGGAGGGAGGTCTTGCT GAGTTTGCAGCCTCCTATAAACGATACGGACTCCATGTCAACAAGGACAACTCGGTCACC TACAGAGAGTGGGCTCCAGGAGCCTCCGAAGCAGTTCTAACCGGCGACTTCAACGGCTGG GACAGACAACAGTACCACATGACCAGAGACGAGTATGGACTGTGGAGCGTGACTGTGCCT CCTACCTCAGATGGTCAGGTGGCAATCCCCCATAACTCCAAGGTCAAGCTTGCTCTGAAG ACCTCCAACGGTCAATGGGTCGATCGACTGCCTGCCTGGTCCACCTACGTCGTCCAGGAC CTGTCCAAATCGCCCATCTATGAGGCTGTGTTCTGGAACCCTCCCGAGTCGGAAAAGTAC CAGTGGAAGAACAAATCTCCCCCCACTCCTGCCAACGCCCAAATCTACGAAGCCCACGTG GGTATCTCCTCCAGCGAACCTCGAGTCGGCACTTACAAGGAGTTTACAAAGAACATTCTC CCTCGAATCCACAAACTGGGCTACAACGTGATCCAGCTCATGGCCATCATGGAACACGCC TACTACGCCTCCTTTGGCTACCAGGTCACCTCCTTCTACGCTATTTCGTCCCGATATGGT ACTCCAGAGGACCTCAAGGAGCTCATTGACACCGCTCACGGTATGGGTATTACTGTTCTT CTGGATGTTGTGCACTCTCATGCTTGCAAAAACGTCGATGACGGTCTCAACAACTTTGAT GGAACTGACCACCAGTACTTCCATGGTGGAGCAAAGGGAGACCATCCTCAGTGGGACTCA AAGCTGTTTGATTACGGAAAGTACGAGGTTCTTCGGTTCTTGCTGTCCAACCTGCGGTTC TATATTGAGGAGTACCACTTTGACGGCTTCCGGTTTGACGGAGTCACCTCTATGCTCTAC AAGCATCATGGTCTCGGTACCGGCTTCTCCGGTGGCTACCATGAGTACTTTGGAGACGAA CATGTTGATCAGCAGGCCGTTGTTTATCTCATGTTGGCTCACGAGCTCATGAGGGAGCTG CAACCTCTTCTTCGACCCGGAGAAGATGCAGGCAACTTCCTCTCCATCGCCGAAGATGTG TCTGGAATGCCTGCTCTCTGTAGACCTGTTTCTGAGGGAGGTGTTGGCTTTGACTACCGT CTGGCCATGGCTATTCCCGACATGTGGATCAAGCTCGTCAAGGAGACCCGAGACGAGGAC TGGGACATGGGCAACATTGTTTTTACTTTGACCAACCGTCGTCATCGAGAAAAGACCATT GCTTATGCTGAGTCTCATGATCAGGCTCTGGTTGGAGACAAAACTCTGGCCTTCTGGCTC ATGGATAAGGAAATGTACACCTCCATGTCTGTTCTTTCCGACCCCAACCCCATCATTGAC CGAGGAATCGCTCTCCACAAGATGATTCGACTCATCACCCATTCTCTTGGAGGAGAAGGA TACCTCAACTTTGAGGGTAACGAGTTTGGACACCCTGAGTGGCTGGACTTCCCTCGAGAG GGCAATGGCTCCTCTTTCCACTACTGTCGACGACAGTGGCCTGTGGTGGATGACAAGCTG TTGAGATACCAGCATCTTAATGAATTCGATGCCGCCATGCAGCACCGAGGAGACCACTAC GGCTGGCTGTCGGCCGACCAGGCTTACGTGTCGTTGAAGAACGAGGACGACAAGGTGGTT GTGTATGAGCGAGCTGGTCTGGTGTTTGTCTTCAACTTCCACCCCAACAAGTCGTTCACT GACTACAGAATCGGTGTGGACCAGCCTGGAACATACACCCTTGTGTTGGATTCTGATTCT CCCGAGTTTGGAGGTTTTGGCCGAATCGACCACGAAAAGACCCGATGCCATACCGAGCCT CTGGAGTGGAACGGACGGGCTAACTGTATGCATATCTACATTCCTTCTCGAGTGGCTCTG GTGTTTGCCCGGGAGGATGACCCTAGACGAAAGTAA
>YALI0C06798g.aa MTLQVCKDDPWLKPFEEELLRRQALVGQWKDHFAKEGGLAEFAASYKRYGLHVNKDNSVT YREWAPGASEAVLTGDFNGWDRQQYHMTRDEYGLWSVTVPPTSDGQVAIPHNSKVKLALK TSNGQWVDRLPAWSTYVVQDLSKSPIYEAVFWNPPESEKYQWKNKSPPTPANAQIYEAHV GISSSEPRVGTYKEFTKNILPRIHKLGYNVIQLMAIMEHAYYASFGYQVTSFYAISSRYG TPEDLKELIDTAHGMGITVLLDVVHSHACKNVDDGLNNFDGTDHQYFHGGAKGDHPQWDS KLFDYGKYEVLRFLLSNLRFYIEEYHFDGFRFDGVTSMLYKHHGLGTGFSGGYHEYFGDE HVDQQAVVYLMLAHELMRELQPLLRPGEDAGNFLSIAEDVSGMPALCRPVSEGGVGFDYR LAMAIPDMWIKLVKETRDEDWDMGNIVFTLTNRRHREKTIAYAESHDQALVGDKTLAFWL MDKEMYTSMSVLSDPNPIIDRGIALHKMIRLITHSLGGEGYLNFEGNEFGHPEWLDFPRE GNGSSFHYCRRQWPVVDDKLLRYQHLNEFDAAMQHRGDHYGWLSADQAYVSLKNEDDKVV VYERAGLVFVFNFHPNKSFTDYRIGVDQPGTYTLVLDSDSPEFGGFGRIDHEKTRCHTEP LEWNGRANCMHIYIPSRVALVFAREDDPRRK*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0C06798g