HomeYALI0B17644g
similar to uniprot|Q12452 Saccharomyces cerevisiae YLR100W ERG27 3-keto sterol reductase, catalyzes the last of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis
Element type: CDS
Element length: 1032 nucleotides,
on anti-sense strand of
Yali0B: complement(2303501..2304532).
Other names:
YALI-CDS3866.1
YALI-IPF9398
Coding sequence: 344 codons.
Element length: 1032 nucleotides,
on anti-sense strand of
Yali0B: complement(2303501..2304532).
Other names:
YALI-CDS3866.1
YALI-IPF9398
Coding sequence: 344 codons.
Database cross references:
EMBL: CR382128
GeneID: 2907211
HOGENOM: Q6CE88
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382128
GeneID: 2907211
HOGENOM: Q6CE88
Homologs and Orthologs
Homologs in protein families: GL3R2390 GL3R2390.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0B17644p 
similar to uniprot|Q12452 Saccharomyces cerevisiae ORF YLR100W ERG27 3-keto sterol reductase singleton
Protein domain map
Database cross references:
Gene3D: G3DSA:3.40.50.720
InterPro: IPR002198
InterPro: IPR002347
InterPro: IPR016040
KEGG: yli:YALI0B17644g
PANTHER: PTHR19410
PRINTS: PR00081
RefSeq: XP_501024.1
UniProtKB/Swiss-Prot: Q6CE88
UniprotKB: ERG27_YARLI
Gene3D: G3DSA:3.40.50.720
InterPro: IPR002198
InterPro: IPR002347
InterPro: IPR016040
KEGG: yli:YALI0B17644g
PANTHER: PTHR19410
PRINTS: PR00081
RefSeq: XP_501024.1
UniProtKB/Swiss-Prot: Q6CE88
UniprotKB: ERG27_YARLI
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>YALI0B17644g.nt ATGGTTCCAAGGCATCTCCCTCACTGTTTCCATCCCCCTGGCTAAGCCTCTGACCTCTCG AGATATTCGAAACATTTACCAGGATCGATACGCCGGCGAGAAGCTGGTTCAGGTGACCGG TGAGGCCCCCGAGGTGCGACACATTTCTGAGAAGCACCACGTCTCTATCGGAGGCTTTGG CGTTTCTTCTAAGGAGGACCGAGTGGTTGTTGTCGGCAACATTGACAACCTGCTCAAGGG AGCCGCCACCCAGTGTCTGCAGAACATTAACCTGGCCATGGGTTACGGCGAGTATGATGG TATTCCTTTGTAGACACGGACTGCAGAGCCCTAAGCATATAAGAAAAGATGATTGAAACC AGCAAGTTGAGTTAAACATGTGTAGACATGCCTTCGTGAGATATATTTGTGATATCCAGA AACTGATACAATGGCTGTTGATATCTATAGAGTGTTAAGTTTTGTTTTTGTTTTTGTTTT TATAGCTACATATATATATCAGCGGTAGGGCTTGCAGTTTGCCTTAGTCAAGTAGAATAC TCTCGTCCTTCTCTCTTGGTGAAGCTTCATCACACTCCTTAGTCCAATATGGGCGATTAT ATATTAACAAGGTGCTCCTCATTCATACCAACAACTTATGACTTCAATTCTTTACATACT GTAATCTTCAACTCCCGGCTTCATCTATTATCACTCGCACTGGTCGCATTGTTCGTATGC ATCGTACACTATAGTGTAACTCTAACCAGATGTCTGCAGATGTAAGCGATCGTCAACAGG GCGATATTCGGGGTGTTGAGCCCTAGTTGACAGATATATTTTCTTGTAGTTGTAATCATA ACGAGATTTTGGTGAAAAATACGTTTTCAGCATTAAATTCTGACCGGTTCTTGTTCAGTA ATCACTCTCCAATGTATTCCCATAGATCCCCTGCATGCATTGTCAAGACTGACGATATCA ACCGACTTTCCTGTGCACAACACGACGTAACTTACAAGCCATGATCCACAACAGAAAAAC GCAGACGGTTGTGATCACAGGCGCGTCATCCAACCTTGGCATTGCTATTGGTAAGCGTCT GATCGACGAGAAAAAAGAAGACGCCCATCTCACTATTGTGGTCACTTCGCGAACCCTTCG AAACGTCCGTGTCGCCATCAAGACCCTCAAGGCACATGCCGTAGCCAAGGAGGTCGGTCC CGAGGTCGACTTTGACTACCTTCTGTTTGATCTGGCAGACATGACGTCTATCAACGGCGC TCTGGTGGAGCTCAAGCTGCGGTTCTCTCGAATCGACACTCTCATCTTCAACTCCAACGC AGCCAACTACATTGGAATCAACTGGCCTCTGGCCATGTGGCGATTCACCACGCAATTCAA GAGCGAAATCGAGAATCCCAGTTGCATGATCCAGGCTGTGGGAGTCAAGTCCGACGACGG TATGGGCTCTGCGTACCAATCCAACGTGTTTGGACCATGGTACATGGTGCTGGAGCTCAC CGAGCAGCTCAAGAACGGCGGAAAGGTCATCTGGATCAGTTCCATCACGTCTTCTGAAAA GTACGTGGATCTGGAAGACATTGAGCTGATTCACAACAAGGAGCCATACAAGGGCTCGAA GCGTCTTATTGACGTGGCCCACAACTACTACTCGCCGAAACTGGAAGAGGAGCATGGTAT CTACTCGTACCTGACCGACCCCGGTATCTTCACCTCCTCCTCGGCCTCCGAGTACCTCAA CATCTTCTCTGCCTTCGGCATGTATCTCATGTTCTACTTTGCCCGGCTCATTGGACTGAC CACCATGAACATTGACCCTTATAAGGGAGCCAACGTGCCTGTGTGGGTGACCTTGAGCGA GGACCCTTCAGCTCTTAAGCGAGAGTATCGTTTGGGCTCGAGAACAGGAAGATGGGGTAC GGAGATGATGGACGCTACAAAGCTGCAATATGAGGGAAGCGAAGAAGTCGGAGCATACAT TGATAAGGGTGTGGGAGAGTGGAGAGAGAAGTTGAAGGATCAGATTAACTAAGCCAATTG AATGGAGTAAAAGTTGATGAGGCAGTGGAGCTAGCTTAATAGACTGCTGGTTGGAGACTG TCAGCTGCCTTAATCTGAGCATGACTTGCTTCGAGACAGTGAAGGTGTCGAAGCTTGAGA GAGTATCCCAGTGTAGCCATCGCTTACATTTCAGTCTATACAAAACTTGGTAACACCGAA ATTAACACATTGGACAATGGACAATGATGACAACTGTCATACAAGTGGAAGCTACGCGTG ATTAGGTATTTCCACAGTGAATTGTTTTTAGAGGTCATGACTACTCTGCAAG
Coding sequence
>YALI0B17644g.cds ATGATCCACAACAGAAAAACGCAGACGGTTGTGATCACAGGCGCGTCATCCAACCTTGGC ATTGCTATTGGTAAGCGTCTGATCGACGAGAAAAAAGAAGACGCCCATCTCACTATTGTG GTCACTTCGCGAACCCTTCGAAACGTCCGTGTCGCCATCAAGACCCTCAAGGCACATGCC GTAGCCAAGGAGGTCGGTCCCGAGGTCGACTTTGACTACCTTCTGTTTGATCTGGCAGAC ATGACGTCTATCAACGGCGCTCTGGTGGAGCTCAAGCTGCGGTTCTCTCGAATCGACACT CTCATCTTCAACTCCAACGCAGCCAACTACATTGGAATCAACTGGCCTCTGGCCATGTGG CGATTCACCACGCAATTCAAGAGCGAAATCGAGAATCCCAGTTGCATGATCCAGGCTGTG GGAGTCAAGTCCGACGACGGTATGGGCTCTGCGTACCAATCCAACGTGTTTGGACCATGG TACATGGTGCTGGAGCTCACCGAGCAGCTCAAGAACGGCGGAAAGGTCATCTGGATCAGT TCCATCACGTCTTCTGAAAAGTACGTGGATCTGGAAGACATTGAGCTGATTCACAACAAG GAGCCATACAAGGGCTCGAAGCGTCTTATTGACGTGGCCCACAACTACTACTCGCCGAAA CTGGAAGAGGAGCATGGTATCTACTCGTACCTGACCGACCCCGGTATCTTCACCTCCTCC TCGGCCTCCGAGTACCTCAACATCTTCTCTGCCTTCGGCATGTATCTCATGTTCTACTTT GCCCGGCTCATTGGACTGACCACCATGAACATTGACCCTTATAAGGGAGCCAACGTGCCT GTGTGGGTGACCTTGAGCGAGGACCCTTCAGCTCTTAAGCGAGAGTATCGTTTGGGCTCG AGAACAGGAAGATGGGGTACGGAGATGATGGACGCTACAAAGCTGCAATATGAGGGAAGC GAAGAAGTCGGAGCATACATTGATAAGGGTGTGGGAGAGTGGAGAGAGAAGTTGAAGGAT CAGATTAACTAA
Predicted translation product
>YALI0B17644g.aa MIHNRKTQTVVITGASSNLGIAIGKRLIDEKKEDAHLTIVVTSRTLRNVRVAIKTLKAHA VAKEVGPEVDFDYLLFDLADMTSINGALVELKLRFSRIDTLIFNSNAANYIGINWPLAMW RFTTQFKSEIENPSCMIQAVGVKSDDGMGSAYQSNVFGPWYMVLELTEQLKNGGKVIWIS SITSSEKYVDLEDIELIHNKEPYKGSKRLIDVAHNYYSPKLEEEHGIYSYLTDPGIFTSS SASEYLNIFSAFGMYLMFYFARLIGLTTMNIDPYKGANVPVWVTLSEDPSALKREYRLGS RTGRWGTEMMDATKLQYEGSEEVGAYIDKGVGEWREKLKDQIN*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0B17644p