YALI0B16588g


similar to uniprot|P07286 Saccharomyces cerevisiae YBR243c ALG7 UDP-N-acetylglucosamine-1-phosphate transferase

Genomic environment map

Element type: CDS
Element length: 1347 nucleotides,
on anti-sense strand of
Yali0B: complement(2182923..2184269).
Other names:
YALI-CDS2815.1
YALI-IPF9215
Coding sequence: 449 codons.
Database cross references:
EMBL: CR382128
GeneID: 2907364
GenomeReviews: CR382128_GR
HOGENOM: HBG412014

Computed results  

None available yet


Homologs and Orthologs

Homologs in protein family: GL3R1157
Orthologs: strict determination not possible; homologs must be refined manually

Protein YALI0B16588p  


similar to uniprot|P07286 Saccharomyces cerevisiae YBR243c ALG7 UDP-N-acetylglucosamine-1-phosphate transferase; SubName: Full=YALI0B16588p;

Protein domain map

Protein length: 448 amino acids
Protein family: GL3R1157
Database cross references:
InterPro: IPR000715
InterPro: IPR018481
KEGG: yli:YALI0B16588g
Pfam: PF00953
RefSeq: XP_500980.1
UniProtKB/TrEMBL: Q6CED2
UniProtKB: Q6CED2_YARLI

Phylogeny  

PhylomeDB:YALI0B16588g

Computed results for YALI0B16588p  

None available yet

Gene Ontology terms  


Sequence data  


Nucleotide sequence    

>YALI0B16588g.nt
ATGTACTCGTCGATATGGACGGTACTGGCCATCTTGGCTCTTTCGGCCAGTCTGATTTTC
AATCCCGCGGACCAGCCTCTTTTGTCGTCAGTCGGTTTCTCCCTCATCGCCTATCTGGTC
ACCTACAACCTGATTCCTGCACTTGGACCAGCCTTCATCAAGGTCGGCTTCTCGGGTCGA
GACCTGTCCAAGAAAGACCGGCCTGAGATTCCCGAGACCATGGGAGCCGTATGTGCCATT
GTCTACCTGTTTTGTATGTTTCTGTTCATTCCTTTTGTGTTCTACCAGTACCTGGCCAAA
ACCATCGGAGGTGGCGTGGTTGTGGGTTACGACAGCTTGAGCGAGGGACTGGTCAAGGGA
CGAATTCTCAGTGCGTTCCCTCACGAAAAACTCGCCGAGTACCTTTCTGCCATCCTGTGT
CTGCAGTCCATGTTCATCCTGGGTGTTGCAGATGATCTCTTCGATATCAGATGGCGAAAC
AAGTTCTTCTTACCTGCCATTGCTGCCATCCCGCTGCTCATAGTTTACTACGTGGACTTT
GGAATTACAGCCGTCATGGTTCCCGTGGTTTTGAGACCTTACTTTGGAGACATAGTGGAC
CTCGGGGCTCTTTACTACATGTACATGGCGGCCGTGGCCATCTTCTGCCCTAACTCCATC
AACATTTACGCTGGCGTGAACGGCTTGGAAGTTGGCCAATCGGTTATGATTGGCGTGTGC
ATCTTGCTGAACGATTTCATCTACCTCGTTCAGCCCAACCACCCCGCTGAAGAATCTCAT
CTCTTCAGTGTCTATCTGCTGCTGCCGTTCCTGGCTGTCAGTATCGCTCTTTTGAGACAC
AACTGGTGCCCTGCAAAATGTTTTGTTGGAGACACCTACTGCTACTTCGCCGGCATGGTC
TTTGCGGTTGTTGGTATTCTCGGCCACTTCTCCAAGACCCTCCTGCTGTTCTTTGTGCCC
CAGATCTTCAACTTCTTGTACTCTGTGCCTCAGCTGTTCAAGATTGTCGACTGTCCTCGA
CATAGACTGCCTAAATTCAACCCCGAGACAGGTCTTTTGGAGCCTTCCCGGACCTACTTT
GACAAAAAGAAGCCTGGTAAGCTTGGCCAAATAATGATCTACGTGCTGGAGAAGCTACAC
CTGCTGAAAGTGTGGAGAGACGAGAAGGGAGTTGTCATCAGCATCTCCAACATGACACTG
ATCAACCTGGTTTTGGTCTATGTTGGACCCCTGCGAGAGGATCACCTTGCCGCTGTGCTT
CTGGGTATCCAGTTTGCTTCCGGTCTGGCTGCTATTGCGCTAAGACATTCAGTTGCAGCT
ATGATCTTTGGTAGGGACAACATTTAA

Coding sequence    

>YALI0B16588g.cds
ATGTACTCGTCGATATGGACGGTACTGGCCATCTTGGCTCTTTCGGCCAGTCTGATTTTC
AATCCCGCGGACCAGCCTCTTTTGTCGTCAGTCGGTTTCTCCCTCATCGCCTATCTGGTC
ACCTACAACCTGATTCCTGCACTTGGACCAGCCTTCATCAAGGTCGGCTTCTCGGGTCGA
GACCTGTCCAAGAAAGACCGGCCTGAGATTCCCGAGACCATGGGAGCCGTATGTGCCATT
GTCTACCTGTTTTGTATGTTTCTGTTCATTCCTTTTGTGTTCTACCAGTACCTGGCCAAA
ACCATCGGAGGTGGCGTGGTTGTGGGTTACGACAGCTTGAGCGAGGGACTGGTCAAGGGA
CGAATTCTCAGTGCGTTCCCTCACGAAAAACTCGCCGAGTACCTTTCTGCCATCCTGTGT
CTGCAGTCCATGTTCATCCTGGGTGTTGCAGATGATCTCTTCGATATCAGATGGCGAAAC
AAGTTCTTCTTACCTGCCATTGCTGCCATCCCGCTGCTCATAGTTTACTACGTGGACTTT
GGAATTACAGCCGTCATGGTTCCCGTGGTTTTGAGACCTTACTTTGGAGACATAGTGGAC
CTCGGGGCTCTTTACTACATGTACATGGCGGCCGTGGCCATCTTCTGCCCTAACTCCATC
AACATTTACGCTGGCGTGAACGGCTTGGAAGTTGGCCAATCGGTTATGATTGGCGTGTGC
ATCTTGCTGAACGATTTCATCTACCTCGTTCAGCCCAACCACCCCGCTGAAGAATCTCAT
CTCTTCAGTGTCTATCTGCTGCTGCCGTTCCTGGCTGTCAGTATCGCTCTTTTGAGACAC
AACTGGTGCCCTGCAAAATGTTTTGTTGGAGACACCTACTGCTACTTCGCCGGCATGGTC
TTTGCGGTTGTTGGTATTCTCGGCCACTTCTCCAAGACCCTCCTGCTGTTCTTTGTGCCC
CAGATCTTCAACTTCTTGTACTCTGTGCCTCAGCTGTTCAAGATTGTCGACTGTCCTCGA
CATAGACTGCCTAAATTCAACCCCGAGACAGGTCTTTTGGAGCCTTCCCGGACCTACTTT
GACAAAAAGAAGCCTGGTAAGCTTGGCCAAATAATGATCTACGTGCTGGAGAAGCTACAC
CTGCTGAAAGTGTGGAGAGACGAGAAGGGAGTTGTCATCAGCATCTCCAACATGACACTG
ATCAACCTGGTTTTGGTCTATGTTGGACCCCTGCGAGAGGATCACCTTGCCGCTGTGCTT
CTGGGTATCCAGTTTGCTTCCGGTCTGGCTGCTATTGCGCTAAGACATTCAGTTGCAGCT
ATGATCTTTGGTAGGGACAACATTTAA

Predicted translation product    

>YALI0B16588g.aa
MYSSIWTVLAILALSASLIFNPADQPLLSSVGFSLIAYLVTYNLIPALGPAFIKVGFSGR
DLSKKDRPEIPETMGAVCAIVYLFCMFLFIPFVFYQYLAKTIGGGVVVGYDSLSEGLVKG
RILSAFPHEKLAEYLSAILCLQSMFILGVADDLFDIRWRNKFFLPAIAAIPLLIVYYVDF
GITAVMVPVVLRPYFGDIVDLGALYYMYMAAVAIFCPNSINIYAGVNGLEVGQSVMIGVC
ILLNDFIYLVQPNHPAEESHLFSVYLLLPFLAVSIALLRHNWCPAKCFVGDTYCYFAGMV
FAVVGILGHFSKTLLLFFVPQIFNFLYSVPQLFKIVDCPRHRLPKFNPETGLLEPSRTYF
DKKKPGKLGQIMIYVLEKLHLLKVWRDEKGVVISISNMTLINLVLVYVGPLREDHLAAVL
LGIQFASGLAAIALRHSVAAMIFGRDNI*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites