HomeYALI0B15708g
similar to uniprot|P32501 Saccharomyces cerevisiae YDR211w GCD6 Catalytic epsilon subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for eIF2
Element type: CDS
Element length: 2046 nucleotides,
on sense strand of
Yali0B: 2081420..2083465.
Other names:
YALI-CDS1233.1
YALI-IPF9276
Coding sequence: 682 codons.
Element length: 2046 nucleotides,
on sense strand of
Yali0B: 2081420..2083465.
Other names:
YALI-CDS1233.1
YALI-IPF9276
Coding sequence: 682 codons.
Database cross references:
EMBL: CR382128
GeneID: 2906937
HOGENOM: Q6CEG9
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382128
GeneID: 2906937
HOGENOM: Q6CEG9
Homologs and Orthologs
Homologs in protein families: GL3C0213.N2 GL3C0213Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0B15708p 
similar to uniprot|P32501 Saccharomyces cerevisiae YDR211w GCD6 translation initiation factor eIF2b epsilon 81 kDa subunit
Protein domain map
Database cross references:
Gene3D: G3DSA:1.25.40.230
InterPro: IPR001451
InterPro: IPR003307
InterPro: IPR005835
KEGG: yli:YALI0B15708g
Pfam: PF00132
Pfam: PF00483
Pfam: PF02020
RefSeq: XP_500943.1
UniProtKB/TrEMBL: Q6CEG9
UniprotKB: Q6CEG9_YARLI
Gene3D: G3DSA:1.25.40.230
InterPro: IPR001451
InterPro: IPR003307
InterPro: IPR005835
KEGG: yli:YALI0B15708g
Pfam: PF00132
Pfam: PF00483
Pfam: PF02020
RefSeq: XP_500943.1
UniProtKB/TrEMBL: Q6CEG9
UniprotKB: Q6CEG9_YARLI
Gene Ontology terms
| GO:0016779 | nucleotidyltransferase activity |
| GO:0009058 | biosynthetic process |
| GO:0008415 | acyltransferase activity |
| GO:0005488 | binding |
Sequence data
>YALI0B15708g.nt GTGACGCGTCTATTAATCCGACTACTTTCCATCTCGTCAGCGGCTCATAGCAATGGGTGC AGCCTTCATGGTTCTTTCTTCTAATCAGTAGTAGATTCGCCATGCTTACACTCATACTTT GAAACTACAGTAAATACACGCCTACAATGCATGTTTGGACCATTCCTCTGTTTCAGCCTG ACAAGGCATAAAGTCAAGAGACATATCTGCTAATAATAAATTGCATGTCGATTTGATCAA TGGTGTGCAAGCGTGACCGGCTCCGGAAAGCTATACAAGTATGACTCCCACACAATGATT GGGTGTGGGTAGAATAGGGGGTTGGGAGGGCGGTCCTTGCTCCCCTTCACAGTGGTATCC GTACTGCGCCTTTCGTGACACCGAATGAACAACAAAAAAAATTGGGCACATGCTCTACAC GTCAGAGAGTCAGACAGTGGCTAACAAGTATACCTGATTGGTGTCAGATTGATCACAAAA TGCCTGGGGTTCCGAACTGTCCATCCAGAGAGTGAGCGACTCGTACTGGTAATTAGTACA GTACATTATCTAAGCACTTAGAGGTGATCAGGAGAGTAGAGTCGAGGCAAAGGACATGAA TCTAGTATATAAATAAAAGAAGTTGGAAGATAATGGTAAAGCACTTGATCTGGTAACTAC TCCATATGAAGTATGTACATCCCGGTCAGAGCAATTACAGGCAGTGAACTCCAAAAAAAA CAACCATAAGCAGGAAGGCAGGTCCATAGGGACCAAAACATACAAAAAAATTTGTCTCAG TTAGTTACACTAGCATTTTGACCACAACAAAAGTAGAATGGTCGAATTATATTCGCTACT CATTGAATAAAACCCATATGACTCTGTCCTTCTACTTCTACGGTATCCTGCCAAAACTTT ATTCGCAAAAATTGAGACTAAAACCCAAACCCCCATGCTCCGATGCGTTTTTCAAACCGA AAGACTGGAACCACTATCCAGGTAATACAACTAACCGTCAATGCCCCCCAAGAAGAAGAA CGCCAAACCCCAAAAGTCGGCCATCGACAAGGACTTCCGTCTACAGGCAGTTATTCTCGC AGATTCCTATCAGGCTCGTTTCCAACCCCTCACCAAGGACTATCCTCGATGCCTGCTTCC TCTAGCCAACACTCCTCTGTTGGAATACACCTTTGAGTTCCTGGCCAAGGCGGGTGTCTG TGAGGTTTTCCTCATGTGCTGTTCGCATGCTGACAAGATTGAGGAGTACATCAAGACATC CAAGTGGTCTGACTCGCATTCGCCATTTGAGATCCACACCAAGAAGCTGACCGAAAGTAT GTCTGTTGGAGATGCCATGCGAGATCTCGATGGAACCGGCTCCATCACCTCCGACTTTCT GCTTGTCTCTGGTGACGTAGTCTCCAACATCGATTTCACTCCTGTTCTGGAGCAGCATCT CCAGCGAAAGCAGGATGACAAGAACGCAATGATGACCATGGTTCTGCGACAGGCCGATGC CTTCCACCGAACCCGTTCCCGAATTGAACCAGGTCTGTTTGTGCTAAATGACAAGACCTC TGAGTGTCTGCGATACGAGGAGCTTTCTCTCAACAACCCCACTGGGTCCATTGATCTGGA CGGAGAGCTGCTCAATGACGATGCCACTCTGTCTATTCGAAATGATCTCATTGATTGCCA CATTGATCTGTGTTCCATCGACGTGCTGGCCCAGTTCACCGAGAACTTCGACTACTCTAC CCTGCGATCCGACTTTGTCAAGAACATCCTGACCTCAGAGATTCTCGGTAAGAAGATCTA CGCCCACATTGTCACCGATGCTTACGCTGCTCGAGTGAGATCACTGCAGACCTACTCTGC TGTCACAAAGGATATCGTGTCACGGTACTCTTACCCTGTCGTTCCTGACTCTAACCTCAT GGATGACCAGACATTCAGCTACCAAATGGGCCACATTTATAAGGAGAAGGGTGTTGTGTT GGCTCAGTCGTGTGTCATCGGATCGAGATCATTGGTGGGAAGAGGAACCAGCGTGGGAGA GCGATCGATGGTTAAGGATACTGTTATTGGACGTGACTGTAAGATTTCCACTAATGTGAA CTTGGTGGACTCCTTCATTTGGAGCAATGTTATCATTGAGGACGATGTTACTGTCAACGG TGGTCTTGTTGCGGATGGAGCCATTCTGAAGAAGGGCTGCAGCGTTGGACCTGGCTCTAT TATTGGTCATGGCGTCACTGTGGAGGAAGGACAGAAAATCGAGGGCACGTATCTCGTTCT GGACGCTGGCGAGAGTATTCCATTCGACGCTATTGACGACGATGACAGCGATTTCGACAC GGACGACGAGTTCAACGCTAACGTCGGCTCTCTGGTTTACAATCTCAAGGAGTTGAACCT TTCTGACACCTCCATCAACGACCACTGCTACGAGGATGACGAAAACATCCGAGCGGTGGC TCCCAAAAAGAAGACGCGACGGCGACTCTCTTCCACAGTTTCTAACGTTTCAGATAACCA CGAGGACGAGTTCCAGAAGGAGGCTATCGCTTCTCTTGACCGAGCTTTCCAGGACAACCA CGAGATTGATATCGCTGCTCTGGAACTTGGTACTCTTCGAATGTCTTCCAACGTGCCCTA TGAGGAGGTTCGAGCTGCATCTGTCAAGGCCATTAACGGCTACATCACTCGAGTTCTCAA TATGGGTGTCACCGACGACCACAAGGTGCCCACCCAGAAGGTGTGGGGCAAGTGGGCCGA GCTGTTTGAGAAGCAGGTGTTTGAACCTGCCGACCAGATCGATTTGCTCAACATTTTGCT CAAAGACTGTTCTCGTCGTCCTGTTGGCAACTACATTCTATTTGCTGCAGTGCAGAGTCT GTATGACGCTGATGTTCTCGACGAGCATGTCATTGTGCGATGGTGGCACCAGCAGCCCGA GGATGTGTCTCCTGAGATTGCCAGTGTGCGAACTCTGCTTGGTAAGTGGGTTACGTGGTT GGAGGAGGCCGAGTCCGAGTCTGAGGAGGAGGATGAGTCCGATTAGATCTTACAGCGCAT GTGTATATATGAATAGACGGTTAGATATGGTACCCGAAATCCAAGTACCGACACTACTTT AGCGATGAAGGAGTGTCTGACAAGTGTCTCAGATCCATTATGAGACATGTGATGAATGTG AGCGGGAATGTGCATGTCCCTTGTATGACACTGTATGAAAACGCACCTACTTACTAATGA TTTGAAGCCGTTATTTTAAATCTCGTAATGGGTAGATCTGAGCGTCGGGCTAACACGAAA CAGGGTTCCATTACAAGTAGTTATGATACCAGTAGAAGTGTATTTG
>YALI0B15708g.cds ATGCCCCCCAAGAAGAAGAACGCCAAACCCCAAAAGTCGGCCATCGACAAGGACTTCCGT CTACAGGCAGTTATTCTCGCAGATTCCTATCAGGCTCGTTTCCAACCCCTCACCAAGGAC TATCCTCGATGCCTGCTTCCTCTAGCCAACACTCCTCTGTTGGAATACACCTTTGAGTTC CTGGCCAAGGCGGGTGTCTGTGAGGTTTTCCTCATGTGCTGTTCGCATGCTGACAAGATT GAGGAGTACATCAAGACATCCAAGTGGTCTGACTCGCATTCGCCATTTGAGATCCACACC AAGAAGCTGACCGAAAGTATGTCTGTTGGAGATGCCATGCGAGATCTCGATGGAACCGGC TCCATCACCTCCGACTTTCTGCTTGTCTCTGGTGACGTAGTCTCCAACATCGATTTCACT CCTGTTCTGGAGCAGCATCTCCAGCGAAAGCAGGATGACAAGAACGCAATGATGACCATG GTTCTGCGACAGGCCGATGCCTTCCACCGAACCCGTTCCCGAATTGAACCAGGTCTGTTT GTGCTAAATGACAAGACCTCTGAGTGTCTGCGATACGAGGAGCTTTCTCTCAACAACCCC ACTGGGTCCATTGATCTGGACGGAGAGCTGCTCAATGACGATGCCACTCTGTCTATTCGA AATGATCTCATTGATTGCCACATTGATCTGTGTTCCATCGACGTGCTGGCCCAGTTCACC GAGAACTTCGACTACTCTACCCTGCGATCCGACTTTGTCAAGAACATCCTGACCTCAGAG ATTCTCGGTAAGAAGATCTACGCCCACATTGTCACCGATGCTTACGCTGCTCGAGTGAGA TCACTGCAGACCTACTCTGCTGTCACAAAGGATATCGTGTCACGGTACTCTTACCCTGTC GTTCCTGACTCTAACCTCATGGATGACCAGACATTCAGCTACCAAATGGGCCACATTTAT AAGGAGAAGGGTGTTGTGTTGGCTCAGTCGTGTGTCATCGGATCGAGATCATTGGTGGGA AGAGGAACCAGCGTGGGAGAGCGATCGATGGTTAAGGATACTGTTATTGGACGTGACTGT AAGATTTCCACTAATGTGAACTTGGTGGACTCCTTCATTTGGAGCAATGTTATCATTGAG GACGATGTTACTGTCAACGGTGGTCTTGTTGCGGATGGAGCCATTCTGAAGAAGGGCTGC AGCGTTGGACCTGGCTCTATTATTGGTCATGGCGTCACTGTGGAGGAAGGACAGAAAATC GAGGGCACGTATCTCGTTCTGGACGCTGGCGAGAGTATTCCATTCGACGCTATTGACGAC GATGACAGCGATTTCGACACGGACGACGAGTTCAACGCTAACGTCGGCTCTCTGGTTTAC AATCTCAAGGAGTTGAACCTTTCTGACACCTCCATCAACGACCACTGCTACGAGGATGAC GAAAACATCCGAGCGGTGGCTCCCAAAAAGAAGACGCGACGGCGACTCTCTTCCACAGTT TCTAACGTTTCAGATAACCACGAGGACGAGTTCCAGAAGGAGGCTATCGCTTCTCTTGAC CGAGCTTTCCAGGACAACCACGAGATTGATATCGCTGCTCTGGAACTTGGTACTCTTCGA ATGTCTTCCAACGTGCCCTATGAGGAGGTTCGAGCTGCATCTGTCAAGGCCATTAACGGC TACATCACTCGAGTTCTCAATATGGGTGTCACCGACGACCACAAGGTGCCCACCCAGAAG GTGTGGGGCAAGTGGGCCGAGCTGTTTGAGAAGCAGGTGTTTGAACCTGCCGACCAGATC GATTTGCTCAACATTTTGCTCAAAGACTGTTCTCGTCGTCCTGTTGGCAACTACATTCTA TTTGCTGCAGTGCAGAGTCTGTATGACGCTGATGTTCTCGACGAGCATGTCATTGTGCGA TGGTGGCACCAGCAGCCCGAGGATGTGTCTCCTGAGATTGCCAGTGTGCGAACTCTGCTT GGTAAGTGGGTTACGTGGTTGGAGGAGGCCGAGTCCGAGTCTGAGGAGGAGGATGAGTCC GATTAG
>YALI0B15708g.aa MPPKKKNAKPQKSAIDKDFRLQAVILADSYQARFQPLTKDYPRCLLPLANTPLLEYTFEF LAKAGVCEVFLMCCSHADKIEEYIKTSKWSDSHSPFEIHTKKLTESMSVGDAMRDLDGTG SITSDFLLVSGDVVSNIDFTPVLEQHLQRKQDDKNAMMTMVLRQADAFHRTRSRIEPGLF VLNDKTSECLRYEELSLNNPTGSIDLDGELLNDDATLSIRNDLIDCHIDLCSIDVLAQFT ENFDYSTLRSDFVKNILTSEILGKKIYAHIVTDAYAARVRSLQTYSAVTKDIVSRYSYPV VPDSNLMDDQTFSYQMGHIYKEKGVVLAQSCVIGSRSLVGRGTSVGERSMVKDTVIGRDC KISTNVNLVDSFIWSNVIIEDDVTVNGGLVADGAILKKGCSVGPGSIIGHGVTVEEGQKI EGTYLVLDAGESIPFDAIDDDDSDFDTDDEFNANVGSLVYNLKELNLSDTSINDHCYEDD ENIRAVAPKKKTRRRLSSTVSNVSDNHEDEFQKEAIASLDRAFQDNHEIDIAALELGTLR MSSNVPYEEVRAASVKAINGYITRVLNMGVTDDHKVPTQKVWGKWAELFEKQVFEPADQI DLLNILLKDCSRRPVGNYILFAAVQSLYDADVLDEHVIVRWWHQQPEDVSPEIASVRTLL GKWVTWLEEAESESEEEDESD*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0B15708p