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Element type: CDS
Element length: 1380 nucleotides,
on anti-sense strand of
Yali0B: complement(1250801..1252180).
Other names:
YALI-IPF8604
Coding sequence: 460 codons.
Element length: 1380 nucleotides,
on anti-sense strand of
Yali0B: complement(1250801..1252180).
Other names:
YALI-IPF8604
Coding sequence: 460 codons.
Database cross references:
EMBL: CR382128
GeneID: 2907298
HOGENOM: Q6CF91
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382128
GeneID: 2907298
HOGENOM: Q6CF91
Homologs and Orthologs
Homologs in protein families: GL3C0576 GL3C0576.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0B09163p 
Protein domain map
Database cross references:
InterPro: IPR007312
KEGG: yli:YALI0B09163g
Pfam: PF04185
RefSeq: XP_500671.1
UniProtKB/TrEMBL: Q6CF91
UniprotKB: Q6CF91_YARLI
InterPro: IPR007312
KEGG: yli:YALI0B09163g
Pfam: PF04185
RefSeq: XP_500671.1
UniProtKB/TrEMBL: Q6CF91
UniprotKB: Q6CF91_YARLI
Sequence data
>YALI0B09163g.nt CTGGGGTCCCTTTTTTTGGGCCTGTCATATCCGTTTGTCGTCTGCTTGTTTGTCTATATT CTTCCTCATGTAGGTTCAAAACCCGACTGTAGGCGACCAACTCAAAAGAGCCATGTTTTG AATGAGAAACACGTTTTGGCTTGAGCGGGGCACAGTTGGTGGTTGGCTACGTACTATACA GGTACTTCACGGGTACTCGTACAATTACCGTAGCACTCAGGACCGGGACCTATTGTTAGC ATGTGCTTCGTATTCGTTTGCACCATGGATGTATTGGTAGACGTACCGGTACGAGTACGA GCTCCGTCCAAGTGCCTGTACCTCCATCTCAGGCACGTCAATCGCTGTGTGCGGATCTGA AACACTTGACGCCACGCGTAGTGCGTTGATCTACCGCCTGACGCTCTGATTAACCCCTTT TGTCGTTTCTGGCCCACGTTTCGTCCTCTATAAAACTCCGCTTTGCCCTGGAAGCTCCGC CAAGAGAAACGTGTCCTGCCAAGCGTCTCGGTATTGGTGGGTGCATGCCAGACGAAGATG CGACTTTGAGAAGCGAAACGAGCGAGGCGAAAACAAACCAACCCCGGATGAGGCGAGTTG GAGAACCAAATCGAAATTGAAAACGTTCGCACCCAGTACTCTCCCAAACTCACGTCTGCG ACGTCAGCCTCGCGTGTTGGTCCTCCCAACTTTTAATCTTGTGCCCTTCATTTAGAGCTA ACTCTGCCCTCTACAGCCTTTGGACTAACAAACCATCCCCCCAACCTAAGAGACATGCCA AGAAGGGTTATGTGGTGAATATCTGGAGGCTGGCCAATGATGTCAGGGCAATTACACGAA ACGTGGTGTCCAGCGTACTAATTTCGACACGCGGCTCTACCCAGACCTTTGACTCTGTCT CTCCCCACAAGTAGCCCGTCGTATAAAGATACCCTCGGTACCCTATGATGATACCTCGTT AAAGCGATCTCCTCAAGTCCCTACAGTATCTATTCTCTTGATGCAGCTCACACTCGTTAT TGCCGCTCTGGCCTCCCTGGTCACCGCCCAGTCTCCCTCCCTGGATACCCAGGCCCTGTA CGGAAACCGACCCACCTGGTCCAAGTACGACCCTCCTCTTGCGACCATCGTTGCTGATGC CGCAAAGGCCCCCACCAACTCCTTTGCTGGCAAGCAGGTGGTTCCCGGCAAGGCCTTTGA CAAGTTCTACCAGATCTGGCTGGAGAACACCGACTACGACAAGGCCTCTGAGCAGGCTGA CATGCAGTGGTTCATGACCCAGGGCATCACTCTGACCAACTACTGGGCCCAGACCCATCC CTCATCCCCCAACTACGTGGCTGCTGTCGGTGGTTCTTACTTTGGATCCTACGACAACTC CTACCGACTCCTCCCCGAGTCTGTCCCCACCGTGGCCGATCTGCTGGAGACCAAGGACAT CTCCTGGGGTGAATACCAGGAGGACCAGCCTTACACCGGCTTCACCGGCTACAACTTCTC GCGACAGTCCGACTACGCTGACGCCTACGTGCGAAAGCACAATCCCCTGGTCTTCTACGA GACCGTCACCAACTACCCCAACCGTCTGGCCAACATCAAGAACTTCACCGAGTTCGACAA GGACGTGGCTGCTAACGCCCTTCCCCAGTGGGCCTTCATCACTCCTAACATGACCAACGA TGCCCATGATACTGATATCGAGTTTGCCGGCAAGTGGGCCCGAGGCTGGCTCGAGCCCCT CCTCAACAACGAGGAGTTCATGAAGAACAACCTCATCATCCTTACCTTTGACGAGAACGA CACCTACTCCAAGAAGAACACCATTCTGGCCATTCTTCTTGGAGGCGCCATCCCCGAGCA CCTCAAGGGCACCACCGACCACACCTACTACAACCACTACTCCAACATTGCCACCTGCGA GGCCAACTGGGAGCTTCCCCATCTCGGCCGAGGAGATGTCGACGCTAACGTCTTCAAGTT CATTGCCGATGACCTCAACATCCCCGTCGCCGAGTTCGACACCACCAACCAGTACAACAA CTTCTCTGCCCCTGGCTTCTTCTCCGACAAGTCTCTTGGTGTTGGCCGACCCCAGCTCAA TGCTACTGGTGCTGGTGGTGCCCGAATTCTGCCTGCTCTGCTCGAGGTCTTTGCCGATGC TTCCGACGTGAACGGAACCGGCTCTGCTGCTACTTTCTTCAACCGAGCTGCCAACAACAA CTCCACCGGTGGTAACAGCACTGTTGTCTCCCCCTCCATTACTGGCTCTGCTGCTCCTTC CGCCTCCGCCACTGTCTCCTCTGGCCAGGCCAACGGTGCCGCTGCCGCTGGTGTTTCTCT GGGAGCTGCTGTTGTCGGAGCTGTGGCTCTCTTCATCTAATCGGACTGCGTCATTTCTTG AAGACATGCTCTACTTATAAAGATGCGACTAACTGCTACGACTCCCGTCGTTTGTTTAAC ATATTGATTAGAAACTTATCGGATGTAACTGTAGTTGTGTATATTGATTCAGTACGGTAG TTAGTGGGTTCGTCGTAAGGTGAATTACTTATACTGGATCGGAGAAATATCAATTTTTAA CGAAAAAGGGCACCTATGTTGTATGTTCAGATGCTCTATGACTTCCCTGGAGATCTAGTA TGGCCCAACCTAGAAGGACCATAATGGATCTTTTTGTATG
>YALI0B09163g.cds ATGCAGCTCACACTCGTTATTGCCGCTCTGGCCTCCCTGGTCACCGCCCAGTCTCCCTCC CTGGATACCCAGGCCCTGTACGGAAACCGACCCACCTGGTCCAAGTACGACCCTCCTCTT GCGACCATCGTTGCTGATGCCGCAAAGGCCCCCACCAACTCCTTTGCTGGCAAGCAGGTG GTTCCCGGCAAGGCCTTTGACAAGTTCTACCAGATCTGGCTGGAGAACACCGACTACGAC AAGGCCTCTGAGCAGGCTGACATGCAGTGGTTCATGACCCAGGGCATCACTCTGACCAAC TACTGGGCCCAGACCCATCCCTCATCCCCCAACTACGTGGCTGCTGTCGGTGGTTCTTAC TTTGGATCCTACGACAACTCCTACCGACTCCTCCCCGAGTCTGTCCCCACCGTGGCCGAT CTGCTGGAGACCAAGGACATCTCCTGGGGTGAATACCAGGAGGACCAGCCTTACACCGGC TTCACCGGCTACAACTTCTCGCGACAGTCCGACTACGCTGACGCCTACGTGCGAAAGCAC AATCCCCTGGTCTTCTACGAGACCGTCACCAACTACCCCAACCGTCTGGCCAACATCAAG AACTTCACCGAGTTCGACAAGGACGTGGCTGCTAACGCCCTTCCCCAGTGGGCCTTCATC ACTCCTAACATGACCAACGATGCCCATGATACTGATATCGAGTTTGCCGGCAAGTGGGCC CGAGGCTGGCTCGAGCCCCTCCTCAACAACGAGGAGTTCATGAAGAACAACCTCATCATC CTTACCTTTGACGAGAACGACACCTACTCCAAGAAGAACACCATTCTGGCCATTCTTCTT GGAGGCGCCATCCCCGAGCACCTCAAGGGCACCACCGACCACACCTACTACAACCACTAC TCCAACATTGCCACCTGCGAGGCCAACTGGGAGCTTCCCCATCTCGGCCGAGGAGATGTC GACGCTAACGTCTTCAAGTTCATTGCCGATGACCTCAACATCCCCGTCGCCGAGTTCGAC ACCACCAACCAGTACAACAACTTCTCTGCCCCTGGCTTCTTCTCCGACAAGTCTCTTGGT GTTGGCCGACCCCAGCTCAATGCTACTGGTGCTGGTGGTGCCCGAATTCTGCCTGCTCTG CTCGAGGTCTTTGCCGATGCTTCCGACGTGAACGGAACCGGCTCTGCTGCTACTTTCTTC AACCGAGCTGCCAACAACAACTCCACCGGTGGTAACAGCACTGTTGTCTCCCCCTCCATT ACTGGCTCTGCTGCTCCTTCCGCCTCCGCCACTGTCTCCTCTGGCCAGGCCAACGGTGCC GCTGCCGCTGGTGTTTCTCTGGGAGCTGCTGTTGTCGGAGCTGTGGCTCTCTTCATCTAA
>YALI0B09163g.aa MQLTLVIAALASLVTAQSPSLDTQALYGNRPTWSKYDPPLATIVADAAKAPTNSFAGKQV VPGKAFDKFYQIWLENTDYDKASEQADMQWFMTQGITLTNYWAQTHPSSPNYVAAVGGSY FGSYDNSYRLLPESVPTVADLLETKDISWGEYQEDQPYTGFTGYNFSRQSDYADAYVRKH NPLVFYETVTNYPNRLANIKNFTEFDKDVAANALPQWAFITPNMTNDAHDTDIEFAGKWA RGWLEPLLNNEEFMKNNLIILTFDENDTYSKKNTILAILLGGAIPEHLKGTTDHTYYNHY SNIATCEANWELPHLGRGDVDANVFKFIADDLNIPVAEFDTTNQYNNFSAPGFFSDKSLG VGRPQLNATGAGGARILPALLEVFADASDVNGTGSAATFFNRAANNNSTGGNSTVVSPSI TGSAAPSASATVSSGQANGAAAAGVSLGAAVVGAVALFI*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0B09163g