HomeYALI0B07513g
similar to uniprot|P32863 Saccharomyces cerevisiae YGL163c RAD54 DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA
Element type: CDS
Element length: 2424 nucleotides,
on anti-sense strand of
Yali0B: complement(991164..993587).
Other names:
YALI-CDS0818.1
YALI-IPF8729
Coding sequence: 808 codons.
Element length: 2424 nucleotides,
on anti-sense strand of
Yali0B: complement(991164..993587).
Other names:
YALI-CDS0818.1
YALI-IPF8729
Coding sequence: 808 codons.
Database cross references:
EMBL: CR382128
GeneID: 2907387
HOGENOM: Q6CFF5
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382128
GeneID: 2907387
HOGENOM: Q6CFF5
Homologs and Orthologs
Homologs in protein family: GL3M4588Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0B07513p 
similar to uniprot|P32863 Saccharomyces cerevisiae YGL163c RAD54 DNA-dependent ATPase of the SNF2P family
Protein domain map
Database cross references:
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR013967
InterPro: IPR014001
InterPro: IPR014021
KEGG: yli:YALI0B07513g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
Pfam: PF08658
RefSeq: XP_500607.1
SMART: SM00487
SMART: SM00490
UniProtKB/TrEMBL: Q6CFF5
UniprotKB: Q6CFF5_YARLI
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR013967
InterPro: IPR014001
InterPro: IPR014021
KEGG: yli:YALI0B07513g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
Pfam: PF08658
RefSeq: XP_500607.1
SMART: SM00487
SMART: SM00490
UniProtKB/TrEMBL: Q6CFF5
UniprotKB: Q6CFF5_YARLI
Sequence data
>YALI0B07513g.nt AAGTAGGATACGGTTCCTACTTGTAGGATTCTATGTTTTGATGAAAGAAACATAGGATAC GGGTCCTACTCGTAGAATTCTATGTTTTGATGTACTCAACCAGAATCACCCTTTTTATTC ATTGGTTTCTGCCTATCTACAAGACAACTGAATACGGGAGATTAGTTGAGGAAATCCGCT AGAATGCGTTGTAGATATAAATGAATCCAAATAGAATGTTGACTCACTGTACTACAATGC TCAGGTTTGAATTATTCCATCTCTCCAAGGTGCTAGATTTACTTAGATATAGTTAAGGAT AGTTTAGGGGTCATGTAATGTCGTTCTAATATCAACCTCATTTACTTAGAATTAGTTGGT GAGTGTGGCAAAGGTGGAATATCAATTAACATGGCAAACTGCACCACAAATCATGTTGTA TACATCGGAGAGGAAATCTGAGAGGAATCGGAAAAGTTCAAAATACTTCTCATAACTGGA TGACGTTTTACACACAAATCTGTGACAATTTTCTGTTCCAAATGAGGCTCAATTTCAGTT CAGTGCCCATACGTACATACAGACACAACTGTACGTTCTGATGGAATGAAAATGAGGACG ATGGAGGCAAGATACCAAGAATTTTGTATGGAATAACCTGTTTTGAGCCCGTTGGAGAAG TCATTGACTCTTTTATATTTCTAATGTGACCGATATTGGTGTTTTTGGAGCGTTTTTGTA AGGTGTTTTGCTTGGGTTTAGGGGTCACGGTTTCGTGCCGTTTAAAAACTACTATTTGAC GACTTACGTAAATCCTTGTACAACCAAGTTTTGTTGAATCACGTTCACAGTCCGTTTTCA TCGCTAACATCACAGTAATCACGCAAAATCGCGTCCGTCGCGTCCGTCGCGTCCCCCGCG TCCCACGCGTCTGTTAATTTACCCAAACCTTGCGCGTCAAATATGTATCCTGATCCACAC AACACTCTCTACTTCTCCACCGTTGCCACCCAACTACAAAATGAGACGAAACAAGGCTCC CAGTCAGATTCGCGAGCACGGATTGCCGGCAGAACGCCCCAGGGACCCCATGGATGTATT ACATAAGCCGTTCAAGCGCCCGGCGCCGTCGTCTGGCTCCAGCTACAACTCCAACTGGCA GCCGTCCAGACGCGCCAGAACGGCCGTCAACTACACGGAAGGCGATCCGGATGCGCCAGT GTACCGATCTGACGACCCCGAGAAACGTGGCGGAGGTGCTGTCGTTCGCCGTGATCCATT GGCGGTCCTGAACCAAAACTTCCGAGTGCCGTTCAAAAACCGAAATGACGACTTTGTGGA ATCTTTTCCGGCGCTGGGGATGCGCAAACCGGTGGATTTTGTGCCCCGACCGCTGCACGA CCCCGCGGGAGAGTTTGCTATTGTTCTGTACGACCCTACCGTCGACGGAGTAAAAGATGC CGTCACCGAAGAGGATATCCAGACCGCCACCGAAATGACCCTGTCGCAGTCGGAGACAGA TGTGGAGACGGTGGAGGAGATGAGAACAATACCCAAGAAACTCACGCTCGCAGAAATCCT CGGAATCTCCCCCAGAGATAAACAAAAGCCCAAAGAGTATCCGGAAGTGCCAGTTGTAAT TGATCCCAAGCTCGCCAAAATCCTCAGACCACACCAGGTCGAAGGAGTCAAATTTCTGTA CCGCGCCACCACCGGCCTCATCAACCCCAAGGCCCATGGGTGCATCATGGCTGACGAAAT GGGTCTGGGCAAGACTCTTCAGTGCATTGCGCTGTTGTGGACGTTGCTGAAACAGAGTCC CCAGGGCAAGGGCACGATTTCCAAGGCCATTGTAGTTTGCCCCAGTTCTCTGGTGCGAAA CTGGGCCGCCGAGTTTGTCAAGTGGCTCGGGGAGGGAGTCGTTGTTCCTTATGCCGTGGA TGGGTCTCAGAAACCGGCTGAGTTGACGGCTGGTCTGAGACAGTGGGCCGAGGCTGAGGG CCGCAAAGTCACACGACCGGTGCTCATCATCTCATATGATACACTACGACGCCAGGTGGG TGCCATTGCCGACTCTGAGGTGGGTCTTTTACTTGCTGACGAGGGTCATAAACTGAAAAA TGGCGATTCTCAGACATTTACCGCGCTCAATCAGCTCAATGTGAAGCGTCGAGTCATTCT CTCAGGTACTCCGATCCAGAACGATCTTTTGGAGTACTTTTCGCTGCTGAACTTTTCCAA TCCTGGCCTGCTAGGCACCAAAGGCGAGTTTCGAAAGAACTACGAGATTCCCATTCTCAA GGGCAGAGATGCCGATGGTACGGATAAAGATGTGGAGAAGGCCGAGGCGAAACTGCTGGA AATGGCCTCTATTGTCTCTCCTCTTATCATCAGACGTACCAACGACATTCTGAGCAAGTA TCTGCCAGTCAAATACGAACATGTTGTCTTCTGCAATCTCGCACCGTTCCAAAAGTCGCT CTATGTGCAATTTCGAACGTCCAAGGAGGCCAGATCTTTGTTGAAGGGTGAAAAGAGCAG TGAAGGAACCACCACTTTGAATGCCATTGGTATCCTCAAAAAGCTGTGCAATCATCCAGA TCTGCTGAAGCTGCCGGACGAAATTGAGGGATGCAGAAAGGTGTTTCCAGACGATTATGC GCCGCCAGACGAACGAGGGTCGCGTGATCGCGACATTTATCCGCATTTCTCCGCCAAGTT TCTCATTCTCGAGCGGATGTTGCGGTCAATCAATGCTGAAACCAACGACAAGATTGTCAT CATTTCAAATTACACGGCCACTCTCGATTTGATTGAAAAAATGTGTCGTCAGAGACGGTA TGGGTGTCTTCGTCTTGATGGAACCATGAACATCAACAAACGAGCCAAGTTGGTGACTCA ATTCAACGACCCCGAGGGCCAAGAGTTCATTTTCCTGCTCTCTTCCAAGGCCGGAGGTTG CGGTTTGAATCTAATTGGAGCTAACCGTCTGATTTTGATGGATCCAGATTGGAACCCTGC CGCAGATCAGCAGGCTCTCGCTCGAGTATGGAGAGATGGCCAGAAGAAGGACTGTTTCGT CTACCGTCTGATTGCTACTGGCACGATTGAGGAGAAGATTTTCCAGCGGCAGTCCATGAA GCAGTCCCTGTCGACCTGTGTGGTTGACGAGGTGCAGGACGTGGAGCGGCACTATTCCAT GTCCAACTTGCGGGAGCTGTTTTCGTACGATGACGCCACCCCTTGCAACACCCACGATAT GTATGAGTGTAAACGATGCCGTGGAGGGAAGCAGTACCAGAGGGCTCCTGCCATGCTGTA TGGAGACGCCACCACGTGGAACCATTACTACAAGGGAACCATGGGGAAGATTGAGGATCT GTTGCTGCGGCAGGAGGAGGAGTTTGACGAGGTGAGTTTTGTGTTCCAATACATTTCTCA CTAGCGTGCGCGAAGGAGATGGGCACGAGTTACTGGCGCGAGTGAGAGAAACGTGCGCGA GCGTGGGTTCGCGAATGTGAATTCGAGGTTGTTCGAAGCACGAGCATGTTACCGTGCACG TCCTGGGAGACATGGACAAGCTGTAGTAGTTGAGTCGTCAAGGCTCTCCTATGACAAGAA GAATATCACACCTCAACAATAGTACTGTTTTTGAAGGAGGGGGTGAGGATGGTGGGTCTG TTGGTACGTAAATACTCGTGAAGTATTGCAACCGGTACTGTAACCAGGGAGAACTGAAGC ATAT
>YALI0B07513g.cds ATGAGACGAAACAAGGCTCCCAGTCAGATTCGCGAGCACGGATTGCCGGCAGAACGCCCC AGGGACCCCATGGATGTATTACATAAGCCGTTCAAGCGCCCGGCGCCGTCGTCTGGCTCC AGCTACAACTCCAACTGGCAGCCGTCCAGACGCGCCAGAACGGCCGTCAACTACACGGAA GGCGATCCGGATGCGCCAGTGTACCGATCTGACGACCCCGAGAAACGTGGCGGAGGTGCT GTCGTTCGCCGTGATCCATTGGCGGTCCTGAACCAAAACTTCCGAGTGCCGTTCAAAAAC CGAAATGACGACTTTGTGGAATCTTTTCCGGCGCTGGGGATGCGCAAACCGGTGGATTTT GTGCCCCGACCGCTGCACGACCCCGCGGGAGAGTTTGCTATTGTTCTGTACGACCCTACC GTCGACGGAGTAAAAGATGCCGTCACCGAAGAGGATATCCAGACCGCCACCGAAATGACC CTGTCGCAGTCGGAGACAGATGTGGAGACGGTGGAGGAGATGAGAACAATACCCAAGAAA CTCACGCTCGCAGAAATCCTCGGAATCTCCCCCAGAGATAAACAAAAGCCCAAAGAGTAT CCGGAAGTGCCAGTTGTAATTGATCCCAAGCTCGCCAAAATCCTCAGACCACACCAGGTC GAAGGAGTCAAATTTCTGTACCGCGCCACCACCGGCCTCATCAACCCCAAGGCCCATGGG TGCATCATGGCTGACGAAATGGGTCTGGGCAAGACTCTTCAGTGCATTGCGCTGTTGTGG ACGTTGCTGAAACAGAGTCCCCAGGGCAAGGGCACGATTTCCAAGGCCATTGTAGTTTGC CCCAGTTCTCTGGTGCGAAACTGGGCCGCCGAGTTTGTCAAGTGGCTCGGGGAGGGAGTC GTTGTTCCTTATGCCGTGGATGGGTCTCAGAAACCGGCTGAGTTGACGGCTGGTCTGAGA CAGTGGGCCGAGGCTGAGGGCCGCAAAGTCACACGACCGGTGCTCATCATCTCATATGAT ACACTACGACGCCAGGTGGGTGCCATTGCCGACTCTGAGGTGGGTCTTTTACTTGCTGAC GAGGGTCATAAACTGAAAAATGGCGATTCTCAGACATTTACCGCGCTCAATCAGCTCAAT GTGAAGCGTCGAGTCATTCTCTCAGGTACTCCGATCCAGAACGATCTTTTGGAGTACTTT TCGCTGCTGAACTTTTCCAATCCTGGCCTGCTAGGCACCAAAGGCGAGTTTCGAAAGAAC TACGAGATTCCCATTCTCAAGGGCAGAGATGCCGATGGTACGGATAAAGATGTGGAGAAG GCCGAGGCGAAACTGCTGGAAATGGCCTCTATTGTCTCTCCTCTTATCATCAGACGTACC AACGACATTCTGAGCAAGTATCTGCCAGTCAAATACGAACATGTTGTCTTCTGCAATCTC GCACCGTTCCAAAAGTCGCTCTATGTGCAATTTCGAACGTCCAAGGAGGCCAGATCTTTG TTGAAGGGTGAAAAGAGCAGTGAAGGAACCACCACTTTGAATGCCATTGGTATCCTCAAA AAGCTGTGCAATCATCCAGATCTGCTGAAGCTGCCGGACGAAATTGAGGGATGCAGAAAG GTGTTTCCAGACGATTATGCGCCGCCAGACGAACGAGGGTCGCGTGATCGCGACATTTAT CCGCATTTCTCCGCCAAGTTTCTCATTCTCGAGCGGATGTTGCGGTCAATCAATGCTGAA ACCAACGACAAGATTGTCATCATTTCAAATTACACGGCCACTCTCGATTTGATTGAAAAA ATGTGTCGTCAGAGACGGTATGGGTGTCTTCGTCTTGATGGAACCATGAACATCAACAAA CGAGCCAAGTTGGTGACTCAATTCAACGACCCCGAGGGCCAAGAGTTCATTTTCCTGCTC TCTTCCAAGGCCGGAGGTTGCGGTTTGAATCTAATTGGAGCTAACCGTCTGATTTTGATG GATCCAGATTGGAACCCTGCCGCAGATCAGCAGGCTCTCGCTCGAGTATGGAGAGATGGC CAGAAGAAGGACTGTTTCGTCTACCGTCTGATTGCTACTGGCACGATTGAGGAGAAGATT TTCCAGCGGCAGTCCATGAAGCAGTCCCTGTCGACCTGTGTGGTTGACGAGGTGCAGGAC GTGGAGCGGCACTATTCCATGTCCAACTTGCGGGAGCTGTTTTCGTACGATGACGCCACC CCTTGCAACACCCACGATATGTATGAGTGTAAACGATGCCGTGGAGGGAAGCAGTACCAG AGGGCTCCTGCCATGCTGTATGGAGACGCCACCACGTGGAACCATTACTACAAGGGAACC ATGGGGAAGATTGAGGATCTGTTGCTGCGGCAGGAGGAGGAGTTTGACGAGGTGAGTTTT GTGTTCCAATACATTTCTCACTAG
>YALI0B07513g.aa MRRNKAPSQIREHGLPAERPRDPMDVLHKPFKRPAPSSGSSYNSNWQPSRRARTAVNYTE GDPDAPVYRSDDPEKRGGGAVVRRDPLAVLNQNFRVPFKNRNDDFVESFPALGMRKPVDF VPRPLHDPAGEFAIVLYDPTVDGVKDAVTEEDIQTATEMTLSQSETDVETVEEMRTIPKK LTLAEILGISPRDKQKPKEYPEVPVVIDPKLAKILRPHQVEGVKFLYRATTGLINPKAHG CIMADEMGLGKTLQCIALLWTLLKQSPQGKGTISKAIVVCPSSLVRNWAAEFVKWLGEGV VVPYAVDGSQKPAELTAGLRQWAEAEGRKVTRPVLIISYDTLRRQVGAIADSEVGLLLAD EGHKLKNGDSQTFTALNQLNVKRRVILSGTPIQNDLLEYFSLLNFSNPGLLGTKGEFRKN YEIPILKGRDADGTDKDVEKAEAKLLEMASIVSPLIIRRTNDILSKYLPVKYEHVVFCNL APFQKSLYVQFRTSKEARSLLKGEKSSEGTTTLNAIGILKKLCNHPDLLKLPDEIEGCRK VFPDDYAPPDERGSRDRDIYPHFSAKFLILERMLRSINAETNDKIVIISNYTATLDLIEK MCRQRRYGCLRLDGTMNINKRAKLVTQFNDPEGQEFIFLLSSKAGGCGLNLIGANRLILM DPDWNPAADQQALARVWRDGQKKDCFVYRLIATGTIEEKIFQRQSMKQSLSTCVVDEVQD VERHYSMSNLRELFSYDDATPCNTHDMYECKRCRGGKQYQRAPAMLYGDATTWNHYYKGT MGKIEDLLLRQEEEFDEVSFVFQYISH*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0B07513g