HomeYALI0A21263g
similar to uniprot|P54783 Saccharomyces cerevisiae YML086c ALO1 D-Arabinono-1,4-lactone oxidase, catalyzes the final step in biosynthesis of D-erythroascorbic acid, which is protective against oxidative stress
Element type: CDS
Element length: 1581 nucleotides,
on anti-sense strand of
Yali0A: complement(2271783..2273363).
Other names:
YALI-CDS2138.1
YALI-IPF10598
Coding sequence: 527 codons.
Element length: 1581 nucleotides,
on anti-sense strand of
Yali0A: complement(2271783..2273363).
Other names:
YALI-CDS2138.1
YALI-IPF10598
Coding sequence: 527 codons.
Database cross references:
EMBL: CR382127
GeneID: 2906352
HOGENOM: Q6CG88
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382127
GeneID: 2906352
HOGENOM: Q6CG88
Homologs and Orthologs
Homologs in protein families: GL3R1598 GL3R1598.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0A21263p 
similar to uniprot|P54783 Saccharomyces cerevisiae YML086c ALO D-arabinono-1 4-lactone oxidase
Protein domain map
Sequence data
Nucleotide sequence
>YALI0A21263g.nt GAAGCAGTTCTTGCCAGCGCGTCGTTTTCACAATCTTGTAGGGTCTTATGGGGGTGCTGT CGTATTCCTCTAGTTCAGGTGGAGGTCGAGACAACATATACTCGCGTTCTCGCTGTTCTC GCTCCTCGGCCCATCTCACATACTTTTCAGCGTTTTTGTAATAGTTGGTGTGTCGTGATT TCTTTTTGCGGATTCGTGCTATCCGGGGTTCTTCCATAGTGTCTCGTTTCTGGTCAAGTT GATCTGTCTACTGTAGTCGACACTCTATCTCTCATACAGGTAACGTGCACAGTGATGCGG CTTGATATTTCAAAAGCACGTCGTAAAAATGGGATGGGATCAAACTGCACGTATTTTGCA GGGTCCGTCTGTGAGCGGTTTATTTACTAATCAGGCCAAATCCGCACTAGTCTGGACTCG GTGCCTAAACGGACCCGGTTGGTAAGCTTAGCTTCTGACTGGGGCGAGGAAACAGGCCAT TGGGCCATTGGGTGGCGTGTTTGGGTCCGGTTGGTTTTGGGCCATTTTGACGTGTGCGGA GATAAGGGGGTGAGAGAGTCAGATTGTGAGGCGATGGACATATATAAATACAGCCAAGCA GCGAAACATCAACTCCCAAAGTGGTCACAAACTATTTGCACTATAAGCCGCAGCAACAGC TCATCTCTCGACCCCGTACGCTGCGGCTGGGAGTCCTCATGTGTGCACCCATTTTTTTTT TTGCATGGCGAACACGGACACCGGAACCTTATTTGAATGGTAAATTTCAACTGTTCACGA AAAGCCAAAAAGCGTTCCTACCACGGTACAAACCACTGTCAGGATCAGAACAGGTCTTTT GTCAGACAGAGAGAGCAGCGGAGTGCAAAAAAGAGCGCAAGATACGACTGATAACACATT CTTGCCGCCATCGCTGACACACTTGACAACAAACAACACACAATCAGACACAAGTTCTGT CATATCCGTCACCCTACAAGTACACTGACCTACACCAACCATGTCACTGCGAAACAGCAC GACTGCTAAGCGGTTTCATTCGCATAAGACCTGGGCAGGGACCTTCTGGTCCCGTCCATC GCTGTACTTCCAGCCCGCAAGCATAGAAGAGCTCCAGGCCATTGTGACACGAGCACGAGA CCTGGGAAAGACAATCATGGTGGTGGGCTCAGCTCACTCACCCTCGGACCTCACCATGAC CTCCCAATGGCTCGTCAACCTCGACAAGCTTAGCAAGGCCGTGTCCTTCAAGCCCCACAC CTCGGGTCTCTACACTGACGTTACTGTCGAGGCCGGTATTCGCATCCATCAGCTCAACGA GGTACTCAAGCGAAAGGGACTGGCCATGCAGAACCTGGGCTCCATTTCAGACCAATCTGT GGCCGGAATCATCAGTACAGGAACCCACGGTTCGTCGGCCTACCACGGTCTGGTTTCCCA GCAAATCGTGTCACTGACCATCATGATCGCCTCCGGTGAGCTGCTCACGTGCTCACCCGA TGAGAACCCTACTCTTTTCCGAGCTGCACTCCTTTCTCTTGGAAAGCTAGGAATCATCGT CTACGCCACTCTCCGAACCGTGCCGGCATACACCATCCACTCCACCCAGCATGTCATCAC CTTTGAGACTCTGATCCGTGAGTGGGACAACCTGTGGACTGCCTCGGAGTATATCCGGGT GTGGTGGTTCCCGTACGCAGAGCGATGCATTCTGTGGCGAGCTTCCAAGTCAGAGTTGCC GCTGTCCGCCCCTCGACCTTCCTGGTACGGCACCTGGCTCGGCCGGCTCTTTTACGAGAC TCTGCTGTGGGTCTCGGTACGACTGTGGCCCTCGCTTACCCCTTCGGTCGAGCGGTTCAT CTTCTCCAGGCAGTACGGCATGGAGGACACTCTGGGTTCCGGAACCGGCTCGGAGGCCGT GCAGGGCTCTGTCGAGGGTCTCAACATGGACTGTCTCTTCTCCCAATTTGTTAACGAGTG GGGCATGCCTCTGGACAATGGCCCCGATGTCCTGCGAGCTCTGCGAGCCAAAATTGAAGC TGCCGCCAAGGACAATATTTATTATGTGCATTCCCCCGTGGAGGTGCGATGCTCCAACAT GTCTGTGCCCGACAGTGGCGACCGAAACGTGGAGCCCAACACTCAGGAGTTTTCTGCTTC GCGACGAGGAGCCATCACCGGCAACACTCTGCGACCTCTTTTGGACATCAATCCTCGAGA CCGGCCTTATGCCTCTCCTCATGGCCATGTGACTAACTCCAACCTCACCCTCTACATCAA CGCCACCATGTACAGACCCTTTGGAGTCAACTCCCCTGTGGGCAAGTGGTACCGTGACTT TGAGGGCATTGTGGCCGAGGCTGGAGGAAAGCCTCACTGGGCCAAAAACTTTTTGGGTCC CGAGACGGCCGAGCTCAAGGATAACGAGAGCGAGGACGGCAAGATGCTTGGTCTCAAGCC CATCATTGATGAGTGGTATGGAGATGATCTCAAGCAGTGGAAGTCGTTGCGAGAAAAGTA CGATCCCACAGGAGTGTTTCTTTCAGGAAAGGTGTGGATGGATAGAAATGGTTTGCTTTA AGGGTACAGCACATACATAGCCTTGGTACAAATAATCTCTACTTGTAGTCATATATAGAG AGTAATGAATAGAAGTGTAAAGTGATGTACAGTAGTAGCTAGAAAGCTACGAAACAAGTG GAGCAATAGTAAACAACGATCACGATAATCTTCTACAGTAGCCACCACAAGTGTATATAA ATGCTACAGTATGTACTGTGGATATTTATGCAAAACGAATGTCCTTACAATTCCGTGTAA GATAAATAATACAATAATTTACAGATGATGTCCTGCTTGAATGGTTCCCGACAGGGAACT C
Coding sequence
>YALI0A21263g.cds ATGTCACTGCGAAACAGCACGACTGCTAAGCGGTTTCATTCGCATAAGACCTGGGCAGGG ACCTTCTGGTCCCGTCCATCGCTGTACTTCCAGCCCGCAAGCATAGAAGAGCTCCAGGCC ATTGTGACACGAGCACGAGACCTGGGAAAGACAATCATGGTGGTGGGCTCAGCTCACTCA CCCTCGGACCTCACCATGACCTCCCAATGGCTCGTCAACCTCGACAAGCTTAGCAAGGCC GTGTCCTTCAAGCCCCACACCTCGGGTCTCTACACTGACGTTACTGTCGAGGCCGGTATT CGCATCCATCAGCTCAACGAGGTACTCAAGCGAAAGGGACTGGCCATGCAGAACCTGGGC TCCATTTCAGACCAATCTGTGGCCGGAATCATCAGTACAGGAACCCACGGTTCGTCGGCC TACCACGGTCTGGTTTCCCAGCAAATCGTGTCACTGACCATCATGATCGCCTCCGGTGAG CTGCTCACGTGCTCACCCGATGAGAACCCTACTCTTTTCCGAGCTGCACTCCTTTCTCTT GGAAAGCTAGGAATCATCGTCTACGCCACTCTCCGAACCGTGCCGGCATACACCATCCAC TCCACCCAGCATGTCATCACCTTTGAGACTCTGATCCGTGAGTGGGACAACCTGTGGACT GCCTCGGAGTATATCCGGGTGTGGTGGTTCCCGTACGCAGAGCGATGCATTCTGTGGCGA GCTTCCAAGTCAGAGTTGCCGCTGTCCGCCCCTCGACCTTCCTGGTACGGCACCTGGCTC GGCCGGCTCTTTTACGAGACTCTGCTGTGGGTCTCGGTACGACTGTGGCCCTCGCTTACC CCTTCGGTCGAGCGGTTCATCTTCTCCAGGCAGTACGGCATGGAGGACACTCTGGGTTCC GGAACCGGCTCGGAGGCCGTGCAGGGCTCTGTCGAGGGTCTCAACATGGACTGTCTCTTC TCCCAATTTGTTAACGAGTGGGGCATGCCTCTGGACAATGGCCCCGATGTCCTGCGAGCT CTGCGAGCCAAAATTGAAGCTGCCGCCAAGGACAATATTTATTATGTGCATTCCCCCGTG GAGGTGCGATGCTCCAACATGTCTGTGCCCGACAGTGGCGACCGAAACGTGGAGCCCAAC ACTCAGGAGTTTTCTGCTTCGCGACGAGGAGCCATCACCGGCAACACTCTGCGACCTCTT TTGGACATCAATCCTCGAGACCGGCCTTATGCCTCTCCTCATGGCCATGTGACTAACTCC AACCTCACCCTCTACATCAACGCCACCATGTACAGACCCTTTGGAGTCAACTCCCCTGTG GGCAAGTGGTACCGTGACTTTGAGGGCATTGTGGCCGAGGCTGGAGGAAAGCCTCACTGG GCCAAAAACTTTTTGGGTCCCGAGACGGCCGAGCTCAAGGATAACGAGAGCGAGGACGGC AAGATGCTTGGTCTCAAGCCCATCATTGATGAGTGGTATGGAGATGATCTCAAGCAGTGG AAGTCGTTGCGAGAAAAGTACGATCCCACAGGAGTGTTTCTTTCAGGAAAGGTGTGGATG GATAGAAATGGTTTGCTTTAA
Predicted translation product
>YALI0A21263g.aa MSLRNSTTAKRFHSHKTWAGTFWSRPSLYFQPASIEELQAIVTRARDLGKTIMVVGSAHS PSDLTMTSQWLVNLDKLSKAVSFKPHTSGLYTDVTVEAGIRIHQLNEVLKRKGLAMQNLG SISDQSVAGIISTGTHGSSAYHGLVSQQIVSLTIMIASGELLTCSPDENPTLFRAALLSL GKLGIIVYATLRTVPAYTIHSTQHVITFETLIREWDNLWTASEYIRVWWFPYAERCILWR ASKSELPLSAPRPSWYGTWLGRLFYETLLWVSVRLWPSLTPSVERFIFSRQYGMEDTLGS GTGSEAVQGSVEGLNMDCLFSQFVNEWGMPLDNGPDVLRALRAKIEAAAKDNIYYVHSPV EVRCSNMSVPDSGDRNVEPNTQEFSASRRGAITGNTLRPLLDINPRDRPYASPHGHVTNS NLTLYINATMYRPFGVNSPVGKWYRDFEGIVAEAGGKPHWAKNFLGPETAELKDNESEDG KMLGLKPIIDEWYGDDLKQWKSLREKYDPTGVFLSGKVWMDRNGLL*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0A21263g