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Element type: CDS
Element length: 1818 nucleotides,
on sense strand of
Yali0A: 1303228..1305045.
Other names:
YALI-CDS1584.1
YALI-IPF9576
Coding sequence: 606 codons.
Element length: 1818 nucleotides,
on sense strand of
Yali0A: 1303228..1305045.
Other names:
YALI-CDS1584.1
YALI-IPF9576
Coding sequence: 606 codons.
Database cross references:
EMBL: CR382127
GeneID: 2906361
GenomeReviews: CR382127_GR
HOGENOM: HBG736259
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382127
GeneID: 2906361
GenomeReviews: CR382127_GR
HOGENOM: HBG736259
Homologs and Orthologs
Homologs in protein family: GL3C0576Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0A12573p 
weakly similar to uniprot|P08540 Kluyveromyces lactis Potential acid phosphatase; SubName: Full=YALI0A12573p;
Protein domain map
Database cross references:
InterPro: IPR007312
KEGG: yli:YALI0A12573g
Pfam: PF04185
RefSeq: XP_500016.1
UniProtKB/TrEMBL: Q6CH46
UniProtKB: Q6CH46_YARLI
Phylogeny
PhylomeDB:YALI0A12573g
InterPro: IPR007312
KEGG: yli:YALI0A12573g
Pfam: PF04185
RefSeq: XP_500016.1
UniProtKB/TrEMBL: Q6CH46
UniProtKB: Q6CH46_YARLI
Phylogeny
PhylomeDB:YALI0A12573gGene Ontology terms
Sequence data
>YALI0A12573g.nt ATGACCACCATCTCCCCCAATCTGGTGGAGATTGCTGCTGCCCAGTCCACCGCCGTCTCC AACCAGTTTACCGCCCCTGTTGTTCCCGGATGTGCGTTCGACAAGTACTACCAGATCTGG CTGGAGAACACCGACTACGACAAGGCGTTTGAGCAGGAGGATATGGCTTGGCTCCGGGGC CAGGGCATCACTCTGACCAACTACTGGTCCCTCACCCACCCTTCCGAGCCCAACTACGTC GCGGCTGTTGGCGGTGACTACTTTGGCATCAATAACGACGACTTCTTCCGAATCCCCGAC AATGTCTTCACTATTGCCGACCTGCTCGATACCAAGGGCATCTCCTGGGGAGAGTACCAG GAGCACCAGCCCTACACCGGTTTCCAGGGCATGAACTTCTCTCGACAGAGCGACTTTGCC CCCGACTACGTGCGAAAGCACAACCCCCTGGTCCACTACGACTCCGTGGTCAACGTTCCC GAGCGACTCGGCAACCTCAAGAACTTCACCGAGTTCAACAAGGACTTTTCCAACGCCCAG ATCCCCCAGTGGGCCTTCATCACCCCCAATATGACCAACGATGCCCACGATACCGATATT GAATTCGCTGGCAAGTGGACCCGGGGCTTCCTCGAGCCCCTGCTGGCTAACAAGGAGTTC ATGGACAAGAACCTGATCATCGTCACCTTTGACGAGAACGAAACCTACCGTCTGGAGAAC AAGGTCCTGGCAGTTCTTCTTGGTGGAGCTGTCCCCAAGGAGCTCCAGGGCACCTCCGAC GACACCTACTACTCGCACTACTCCAACCTGGCCACCGTCCAGGCCAACTGGCAACTTCCC CATCTCGGACGAGGCGACGCGCTTGCCAACCCCTTCAAGTTTGTTGCCGACCAGCTCAAC ATTTCCGTCGTCGACTACGATACTACTGGCCAGTTCAACAACCAGTCTGTTGTCGGCTAC TTCAACGACGAGCGAGTACCCATCCCCGCCCCCAACGCCTCCGCCATTGGAGTGGTTGGA AACACCATTTACCAGAAGATTGCCGACATTTGGGGCGGCGAGGTCCCCAAGGTGGCCACC CCCTCCACTTGTCCCACCAAGATTGTCGAGGAGTCTGCCATCTCTTTTAACAATGAGACC GAGTCTGCCACCCCCTCCAACAATGCGGCCGAGTCTGCTGATGTCCAGTCCACCTCTATC GAGGGCCAGTACGTCACTATCTCCTCCAACTGTTCTACTTCCGCTAACGCTACTCTTCAG TCTGTTGCCGTTTCTACCAAGTCCATCGCCACCGCTACCGTTGTTGATGGCGAGTACGTG ACCGTTTACGTCACTGACTGTCCCGTTACCACCGTCGATTCCAATGGAGACATTACCACT CGGGTTGTTCAGTCCACCGTCACCGAGACCGTTTGTCCCAAGTGCACTAAGATCGAGACT AAGGAGTCTTCTAAGGAGTCCCCCAAGGAGTCTCCTAAGGCCACCTCTGTTCAGACCCCC AAGGAGACCCCCAAGGGATCCCCCAAGGCTGTTGAGACCCCGAAGGAGTCTCCTAAGACC ACTTCTGCCCCTCAGACCCCCAAGGAGTCCCCCAAGGCTGCCGAGACCCCCAAGGCTTCC CCCAAGGAGAACGATTCTACCGTGACAATCAACAAGACCGTGACCAAGACCCAGTCCGCA GCTACCACCATGGTGCCCAGCAAGTCGGCTCCTGCCCAGGCCCCCAAGAGCGAGACTACT CCTGCCCAGGCCAACGGCGCTGCCAAGGCTGTTGTTGGAGCTGCTGCTGTCATTCCCGCC CTTATGGCTCTGTTCTAA
>YALI0A12573g.cds ATGACCACCATCTCCCCCAATCTGGTGGAGATTGCTGCTGCCCAGTCCACCGCCGTCTCC AACCAGTTTACCGCCCCTGTTGTTCCCGGATGTGCGTTCGACAAGTACTACCAGATCTGG CTGGAGAACACCGACTACGACAAGGCGTTTGAGCAGGAGGATATGGCTTGGCTCCGGGGC CAGGGCATCACTCTGACCAACTACTGGTCCCTCACCCACCCTTCCGAGCCCAACTACGTC GCGGCTGTTGGCGGTGACTACTTTGGCATCAATAACGACGACTTCTTCCGAATCCCCGAC AATGTCTTCACTATTGCCGACCTGCTCGATACCAAGGGCATCTCCTGGGGAGAGTACCAG GAGCACCAGCCCTACACCGGTTTCCAGGGCATGAACTTCTCTCGACAGAGCGACTTTGCC CCCGACTACGTGCGAAAGCACAACCCCCTGGTCCACTACGACTCCGTGGTCAACGTTCCC GAGCGACTCGGCAACCTCAAGAACTTCACCGAGTTCAACAAGGACTTTTCCAACGCCCAG ATCCCCCAGTGGGCCTTCATCACCCCCAATATGACCAACGATGCCCACGATACCGATATT GAATTCGCTGGCAAGTGGACCCGGGGCTTCCTCGAGCCCCTGCTGGCTAACAAGGAGTTC ATGGACAAGAACCTGATCATCGTCACCTTTGACGAGAACGAAACCTACCGTCTGGAGAAC AAGGTCCTGGCAGTTCTTCTTGGTGGAGCTGTCCCCAAGGAGCTCCAGGGCACCTCCGAC GACACCTACTACTCGCACTACTCCAACCTGGCCACCGTCCAGGCCAACTGGCAACTTCCC CATCTCGGACGAGGCGACGCGCTTGCCAACCCCTTCAAGTTTGTTGCCGACCAGCTCAAC ATTTCCGTCGTCGACTACGATACTACTGGCCAGTTCAACAACCAGTCTGTTGTCGGCTAC TTCAACGACGAGCGAGTACCCATCCCCGCCCCCAACGCCTCCGCCATTGGAGTGGTTGGA AACACCATTTACCAGAAGATTGCCGACATTTGGGGCGGCGAGGTCCCCAAGGTGGCCACC CCCTCCACTTGTCCCACCAAGATTGTCGAGGAGTCTGCCATCTCTTTTAACAATGAGACC GAGTCTGCCACCCCCTCCAACAATGCGGCCGAGTCTGCTGATGTCCAGTCCACCTCTATC GAGGGCCAGTACGTCACTATCTCCTCCAACTGTTCTACTTCCGCTAACGCTACTCTTCAG TCTGTTGCCGTTTCTACCAAGTCCATCGCCACCGCTACCGTTGTTGATGGCGAGTACGTG ACCGTTTACGTCACTGACTGTCCCGTTACCACCGTCGATTCCAATGGAGACATTACCACT CGGGTTGTTCAGTCCACCGTCACCGAGACCGTTTGTCCCAAGTGCACTAAGATCGAGACT AAGGAGTCTTCTAAGGAGTCCCCCAAGGAGTCTCCTAAGGCCACCTCTGTTCAGACCCCC AAGGAGACCCCCAAGGGATCCCCCAAGGCTGTTGAGACCCCGAAGGAGTCTCCTAAGACC ACTTCTGCCCCTCAGACCCCCAAGGAGTCCCCCAAGGCTGCCGAGACCCCCAAGGCTTCC CCCAAGGAGAACGATTCTACCGTGACAATCAACAAGACCGTGACCAAGACCCAGTCCGCA GCTACCACCATGGTGCCCAGCAAGTCGGCTCCTGCCCAGGCCCCCAAGAGCGAGACTACT CCTGCCCAGGCCAACGGCGCTGCCAAGGCTGTTGTTGGAGCTGCTGCTGTCATTCCCGCC CTTATGGCTCTGTTCTAA
>YALI0A12573g.aa MTTISPNLVEIAAAQSTAVSNQFTAPVVPGCAFDKYYQIWLENTDYDKAFEQEDMAWLRG QGITLTNYWSLTHPSEPNYVAAVGGDYFGINNDDFFRIPDNVFTIADLLDTKGISWGEYQ EHQPYTGFQGMNFSRQSDFAPDYVRKHNPLVHYDSVVNVPERLGNLKNFTEFNKDFSNAQ IPQWAFITPNMTNDAHDTDIEFAGKWTRGFLEPLLANKEFMDKNLIIVTFDENETYRLEN KVLAVLLGGAVPKELQGTSDDTYYSHYSNLATVQANWQLPHLGRGDALANPFKFVADQLN ISVVDYDTTGQFNNQSVVGYFNDERVPIPAPNASAIGVVGNTIYQKIADIWGGEVPKVAT PSTCPTKIVEESAISFNNETESATPSNNAAESADVQSTSIEGQYVTISSNCSTSANATLQ SVAVSTKSIATATVVDGEYVTVYVTDCPVTTVDSNGDITTRVVQSTVTETVCPKCTKIET KESSKESPKESPKATSVQTPKETPKGSPKAVETPKESPKTTSAPQTPKESPKAAETPKAS PKENDSTVTINKTVTKTQSAATTMVPSKSAPAQAPKSETTPAQANGAAKAVVGAAAVIPA LMALF*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/YALI/YALI0A12573g