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Element type: CDS
Element length: 2262 nucleotides,
on anti-sense strand of
Yali0A: complement(1217592..1219853).
Other names:
YALI-CDS0960.1
YALI-IPF10578
Coding sequence: 754 codons.
Element length: 2262 nucleotides,
on anti-sense strand of
Yali0A: complement(1217592..1219853).
Other names:
YALI-CDS0960.1
YALI-IPF10578
Coding sequence: 754 codons.
Database cross references:
EMBL: CR382127
GeneID: 2906178
GenomeReviews: CR382127_GR
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR382127
GeneID: 2906178
GenomeReviews: CR382127_GR
Homologs and Orthologs
Homologs in protein family: GL3C5301Orthologs: strict determination not possible; homologs must be refined manually
Protein YALI0A11649p 
similar to uniprot|Q6CH30 Yarrowia lipolytica YALI0A13233g threonine-rich protein; SubName: Full=YALI0A11649p;
Protein domain map
Database cross references:
KEGG: yli:YALI0A11649g
RefSeq: XP_499987.1
UniProtKB/TrEMBL: Q6CH75
UniProtKB: Q6CH75_YARLI
KEGG: yli:YALI0A11649g
RefSeq: XP_499987.1
UniProtKB/TrEMBL: Q6CH75
UniProtKB: Q6CH75_YARLI
Computed results for YALI0A11649p
None available yet
Gene Ontology terms
None available yet
Sequence data
>YALI0A11649g.nt ATGCGTGATCCGTATGCCATTAAATACTGGCTTTCGAGATCCGGCTCTCCCCCGTACACT CTTGCGCAGTACAACGAAGCCATCAACCAGGTGTACAAGATGTACGCCGCCCAGCAGGCT GCTAGATGGAAGGAGACCCAAGAACAAGTCACGGTGGTCAACAACTGGCCCCCCGCTGGA AAGTGTATCCCCCTTGCCTCGATCACCGCCACAACTGTCGTTCCTGGTACTAAAGCTGGA ACCACCACAATCTCCAGCGGTGGTCGCTACCATGTGGAGATTACCAAAGTTCCTGTTACC ACCAACACTATCCCTGGATTGTCTGCTGGAACACGAACCCTGGTAAATTCTCAGGGAAAC TTCTACAATGAGGTTGTAGTTGTTCCTGCCTCGACAACCACCGTGCCAGGCCACACAGCT GGAACTGCGACTCTTACGGATGCTGACGGCGGATTTTATGAAGTGGTCACGCTCGTTCCT GTGTCAACCATCACTGTTCCGGGTTTAGTCACTGGCACGGAAACCCTCGTCAATCGCAAT GGGAGTTTTTATGAGCAGGTAACCGTCGTCCCCACGTCAACAACGGTCGTTCCAGGTCAT ATTGTTGGAACTGCCACTATTCGAAACAGCGATGGCGGCTTCAACGAGCGAGTCACGAGT GTTCCTGTCTCCACCAACACCGTTCCTGGATTGATACCAGGAACTGCCACCCTTGTCAAC CACAATGGGAGTTTTTATGAGCAGGTAACCGTCGTCCCCACGTCAACAACGGTCGTGCCA GGCCATACAGCAGGAACTGAAACTCTGCGAAACACTGATGGTGGGTTCTATGTTCGGGCT ACTGTCATCCCTGGGTCAACAACAGTGGTTCCGGGCCACACGGCTGGAACCGCGACTCTT CAGAACACTGATGGCAGTTTCTATGAAGTAGTTACCAATGTTCCCGTCTCCACAAACATT GTTCTAGGTCTGACTGCTGGCACAGAAACCCTCGTCGATAGTAAAGGCAACTTCTATGAG CAGGTAACGCGCACTGTGGTCTCGACAAACACTGTCTTAGGAGAATCTTCTGGTACTGAG ACACTCACCAATCCCCACGGTGACTTCTATGAGCAGGTAACCAGTGTTTCAAGCCCACCT ATCTTTTCAACTCGTTCCTCCGGTAGCATTGTTTCCACAAACATTGTCCCAGGATACAGA GAAGGTACGGAAATCCTCACTGGCACCAATGGAAACCTGTTTGTTCAAGTGACACGCACT CCAATCTCCACCAACACTATTTCTGGATCCATTGTTGGCACAGAGATCCTTATCAACTCG GACGGAGATTTTTTCGAGCAAGTAACCAGCATTCGAGCCTCCTCCATCGTTGATGCAACC TCCTCAGCCTCTGCCTCCACTGATAGCTTCTCGTCAACTGGAAGCACCTCGTCAACTGGC GTTCCTTCCTTGACACGTATTAGTGGTACATTCACTGTTTTTGCCACGAAAGATTCCTCT CCATCTGCTTTCGTCGCCACAACCATCTCTTTTGGACACTCCAAAGTAGCTGAAACCATC AGAGACACCACTGGAGACGCTATGGAGCAGGCGACTAGTACTCCATTCTCCACCAGCCCT CTTGTAGGATCCGTTATCGACACGGAAATACTGACCAAGTCGAACGGAGATGTCAGCATC CCGGTCCCAACAGCTGCTAATACCAAGTCCTCTGCAACTTCCTCGACTGATATCATCACA GTCGTCCCTGACTCCGTGCATTTTGGATCCACAAAAGAAGTCAAGTCTCCCACTGACACC ATCAGTAGTTCCTTTGTGCATGAGACGGGCGCCACCGTCGCCACCAAGACTTCTACTGGA ATCACCGTTGCGATAGAAATACATGCGAGCCCCAGCAGTGTCCAGTATAAGCAGACTACC GGTTTCCCGAAAGTTGCTTCCACTATGGCCATCGCCTCCAACAGTGTTGTCTCCGCTCTC GTGGCTCCTAGACCTACAACACACACCAGTCTCAGAAACTCCGAAGATGAGTTCACTGGG CTGAGTACCAGCGTTAATGTCTCGAAAAACATGGTGTCGACTGTATCTGGACCCAACGAA TCTCAGACAAGCAAGGGACCTGGGGACGGCTCAATCAGCGTTGGCGGAGTTCCTCTCTCT GCCCAGCCTCCCGGCCTTGAGTTTCCCATCCAGGCCAACAGTGCTTCCCGACTGGCTATC GGTGCCGTTCTCGTCCTTCCAATGGCCCTTACTCTTCTGTGA
>YALI0A11649g.cds ATGCGTGATCCGTATGCCATTAAATACTGGCTTTCGAGATCCGGCTCTCCCCCGTACACT CTTGCGCAGTACAACGAAGCCATCAACCAGGTGTACAAGATGTACGCCGCCCAGCAGGCT GCTAGATGGAAGGAGACCCAAGAACAAGTCACGGTGGTCAACAACTGGCCCCCCGCTGGA AAGTGTATCCCCCTTGCCTCGATCACCGCCACAACTGTCGTTCCTGGTACTAAAGCTGGA ACCACCACAATCTCCAGCGGTGGTCGCTACCATGTGGAGATTACCAAAGTTCCTGTTACC ACCAACACTATCCCTGGATTGTCTGCTGGAACACGAACCCTGGTAAATTCTCAGGGAAAC TTCTACAATGAGGTTGTAGTTGTTCCTGCCTCGACAACCACCGTGCCAGGCCACACAGCT GGAACTGCGACTCTTACGGATGCTGACGGCGGATTTTATGAAGTGGTCACGCTCGTTCCT GTGTCAACCATCACTGTTCCGGGTTTAGTCACTGGCACGGAAACCCTCGTCAATCGCAAT GGGAGTTTTTATGAGCAGGTAACCGTCGTCCCCACGTCAACAACGGTCGTTCCAGGTCAT ATTGTTGGAACTGCCACTATTCGAAACAGCGATGGCGGCTTCAACGAGCGAGTCACGAGT GTTCCTGTCTCCACCAACACCGTTCCTGGATTGATACCAGGAACTGCCACCCTTGTCAAC CACAATGGGAGTTTTTATGAGCAGGTAACCGTCGTCCCCACGTCAACAACGGTCGTGCCA GGCCATACAGCAGGAACTGAAACTCTGCGAAACACTGATGGTGGGTTCTATGTTCGGGCT ACTGTCATCCCTGGGTCAACAACAGTGGTTCCGGGCCACACGGCTGGAACCGCGACTCTT CAGAACACTGATGGCAGTTTCTATGAAGTAGTTACCAATGTTCCCGTCTCCACAAACATT GTTCTAGGTCTGACTGCTGGCACAGAAACCCTCGTCGATAGTAAAGGCAACTTCTATGAG CAGGTAACGCGCACTGTGGTCTCGACAAACACTGTCTTAGGAGAATCTTCTGGTACTGAG ACACTCACCAATCCCCACGGTGACTTCTATGAGCAGGTAACCAGTGTTTCAAGCCCACCT ATCTTTTCAACTCGTTCCTCCGGTAGCATTGTTTCCACAAACATTGTCCCAGGATACAGA GAAGGTACGGAAATCCTCACTGGCACCAATGGAAACCTGTTTGTTCAAGTGACACGCACT CCAATCTCCACCAACACTATTTCTGGATCCATTGTTGGCACAGAGATCCTTATCAACTCG GACGGAGATTTTTTCGAGCAAGTAACCAGCATTCGAGCCTCCTCCATCGTTGATGCAACC TCCTCAGCCTCTGCCTCCACTGATAGCTTCTCGTCAACTGGAAGCACCTCGTCAACTGGC GTTCCTTCCTTGACACGTATTAGTGGTACATTCACTGTTTTTGCCACGAAAGATTCCTCT CCATCTGCTTTCGTCGCCACAACCATCTCTTTTGGACACTCCAAAGTAGCTGAAACCATC AGAGACACCACTGGAGACGCTATGGAGCAGGCGACTAGTACTCCATTCTCCACCAGCCCT CTTGTAGGATCCGTTATCGACACGGAAATACTGACCAAGTCGAACGGAGATGTCAGCATC CCGGTCCCAACAGCTGCTAATACCAAGTCCTCTGCAACTTCCTCGACTGATATCATCACA GTCGTCCCTGACTCCGTGCATTTTGGATCCACAAAAGAAGTCAAGTCTCCCACTGACACC ATCAGTAGTTCCTTTGTGCATGAGACGGGCGCCACCGTCGCCACCAAGACTTCTACTGGA ATCACCGTTGCGATAGAAATACATGCGAGCCCCAGCAGTGTCCAGTATAAGCAGACTACC GGTTTCCCGAAAGTTGCTTCCACTATGGCCATCGCCTCCAACAGTGTTGTCTCCGCTCTC GTGGCTCCTAGACCTACAACACACACCAGTCTCAGAAACTCCGAAGATGAGTTCACTGGG CTGAGTACCAGCGTTAATGTCTCGAAAAACATGGTGTCGACTGTATCTGGACCCAACGAA TCTCAGACAAGCAAGGGACCTGGGGACGGCTCAATCAGCGTTGGCGGAGTTCCTCTCTCT GCCCAGCCTCCCGGCCTTGAGTTTCCCATCCAGGCCAACAGTGCTTCCCGACTGGCTATC GGTGCCGTTCTCGTCCTTCCAATGGCCCTTACTCTTCTGTGA
>YALI0A11649g.aa MRDPYAIKYWLSRSGSPPYTLAQYNEAINQVYKMYAAQQAARWKETQEQVTVVNNWPPAG KCIPLASITATTVVPGTKAGTTTISSGGRYHVEITKVPVTTNTIPGLSAGTRTLVNSQGN FYNEVVVVPASTTTVPGHTAGTATLTDADGGFYEVVTLVPVSTITVPGLVTGTETLVNRN GSFYEQVTVVPTSTTVVPGHIVGTATIRNSDGGFNERVTSVPVSTNTVPGLIPGTATLVN HNGSFYEQVTVVPTSTTVVPGHTAGTETLRNTDGGFYVRATVIPGSTTVVPGHTAGTATL QNTDGSFYEVVTNVPVSTNIVLGLTAGTETLVDSKGNFYEQVTRTVVSTNTVLGESSGTE TLTNPHGDFYEQVTSVSSPPIFSTRSSGSIVSTNIVPGYREGTEILTGTNGNLFVQVTRT PISTNTISGSIVGTEILINSDGDFFEQVTSIRASSIVDATSSASASTDSFSSTGSTSSTG VPSLTRISGTFTVFATKDSSPSAFVATTISFGHSKVAETIRDTTGDAMEQATSTPFSTSP LVGSVIDTEILTKSNGDVSIPVPTAANTKSSATSSTDIITVVPDSVHFGSTKEVKSPTDT ISSSFVHETGATVATKTSTGITVAIEIHASPSSVQYKQTTGFPKVASTMAIASNSVVSAL VAPRPTTHTSLRNSEDEFTGLSTSVNVSKNMVSTVSGPNESQTSKGPGDGSISVGGVPLS AQPPGLEFPIQANSASRLAIGAVLVLPMALTLL*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://192.168.122.177/elt/YALI/YALI0A11649g