YALI0A11473g


weakly similar to uniprot|P12866 Saccharomyces cerevisiae YKL209c STE6 ATP-binding cassette transporter protein

Genomic environment map

Element type: CDS
Element length: 3765 nucleotides,
on sense strand of
Yali0A: 1183677..1187441.
Other names:
YALI-CDS0206.1
YALI-IPF10527
Coding sequence: 1255 codons.
Database cross references:
EMBL: CR382127
GeneID: 2906177
GenomeReviews: CR382127_GR
HOGENOM: HBG758042

Computed results  

None available yet


Protein YALI0A11473p  


weakly similar to uniprot|P12866 Saccharomyces cerevisiae YKL209c STE6 ATP-binding cassette transporter protein; SubName: Full=YALI0A11473p;

Protein domain map

Protein length: 1254 amino acids
Protein family: GL3C0060
Database cross references:
InterPro: IPR001140
InterPro: IPR003439
InterPro: IPR003593
InterPro: IPR011527
InterPro: IPR017871
InterPro: IPR017940
KEGG: yli:YALI0A11473g
PROSITE: PS00211
PROSITE: PS50893
PROSITE: PS50929
Pfam: PF00005
Pfam: PF00664
RefSeq: XP_499981.1
SMART: SM00382
UniProtKB/TrEMBL: Q6CH81
UniProtKB: Q6CH81_YARLI

Phylogeny  

PhylomeDB:YALI0A11473g

Computed results for YALI0A11473p  

None available yet

Gene Ontology terms  


Sequence data  


Nucleotide sequence    

>YALI0A11473g.nt
ATGTCGACCAAAGACCCCTACGAGGGGCTATCTGAGGAGAGCATCGCCATTCTCAAGGCC
CAAACCACCAGTGAGCCCGTCAACGTCAACTACCGCACCTTGCTACTTCGGTATGCCACA
CCTCTGGACAAGGCGGAGATTCTGGTTTCGTACGTCTTTTCGGCCTGTGCGGGAGCGTGT
CTGCCTCTTTTCACCCTGATTTTCGGCTCCATGACCAACGAGTTTGTCCGGTACTTTGTG
GAGGGGGCCACGCCGGCTGAATTCGGCCACCAGATCAACTACCTGGCGCGGTATTTCATC
TATCTTTTTGCAGGCATCTTCGCCTTTTCTTTCCTCGAAACGTACATGCACGTCCAGATG
GGCGAGAAGCTGACCGGCCGGATCCGAGCACATTATCTGGAGGCCATTATGCGCCAGAAC
ATTGGCTTCTTCGACAAGGTCGGAGCCGGAGAAATCACCAACCGAATCACCACAGACACC
AACCTGATCCAGGAGGGCATCAGTGAAAAGGCTGGCCTGATTGTTTCCTCCATTGCCGCC
ATAATTTCGGCCTTCATTATTGGGTTCATCAAGTCGTGGAAGCTGACGCTGATCATGATG
TCGTCGTTTTTCGCCCTACTGTTCGCCATGACTACAGCAGTCTATTTTGTGGTCAAGTTT
GCCAAACTGGCCATTGTTTCCGACGCCAAGGCGTCTTCAGTCGCGGAAGAAGTTCTTGGA
GCCATCAGAAACGTGGTTGCGTTTGGAACCCAGGACAGATTGACCCAAAAGTACGATGAC
CGGCTGGTGGTGTCCATGAAGTACCACATTTTCCGTGGCCGGGGCTCGGCGGCGGCTATT
GCTTCGGTGTGGACCATTGCCTATCTCAACTACGCTCTCTCCTTCTGGGAGGGGTCTCGA
CTCGTGTCTTGGGGACAAGTCAATGTCGGAAACATCATGACCGTGCTGTTTGCCGTCATG
ATTGGAGCTGTCATGGTCGGCAATGTGGCTCCAAACTTGCAGGCCATGGGCTCTGCCATT
GCCTCTGGCCAGAAGATCTTTGAGACCATTGACCGGGTCCCTCCCATCGACAGCTTCTCC
GACAAGGGTCAGAAGCTGGACCAGGTTCACGGCCACATTCAGCTGGAGCACGTCAACTTC
CGGTATCCGTCTCGACCGGATGTTTCTGTTCTGCACGACTTCTCTTTGGAGATCAAACCA
GGGCAGACTGTGGCGCTTGTGGGCGCTTCTGGCAGCGGAAAGTCCACCATTATTGGCATT
CTCGAGCGATTCTACGAAATTCTCGGCGGAAAAGTGACGATTGACGGAGTAGACATTTCT
TCGCTCAACGTGAGATGGCTGCGACAACAGCTGGCTCTGGTGTCACAGGAACCCACTCTT
TTTGGCGTCAGCATCTACGAAAACATTGCCTACGGTTTGATTGGAACTCCCCATGAGAAC
GCTGACCCCGAGAAGAAACGTCAGCTGGTGGAGGATGCTGCCCGTCAAGCCAACGCCTAC
GACTTCATCCAGGACTTGACTGACGGGTTTGAAACCAATGTTGGAGACCGGGGCTTTCTG
CTGTCAGGAGGCCAGAAACAGCGAATTGCTATTGCCCGGGCCATTGTTAGAGAGCCCAAG
ATCTTGTTGCTGGACGAAGCCACTTCTGCACTCGACACCAAGAGTGAAGGCATTGTTCAG
GACGCACTGGACAAGGCAGCGGCGGACAGAACCACCATTGTCATTGCCCATCGTCTCAGC
ACGGTCAAGAACGCCGATCTCATTGTGGTCATGAACAAGGGCAGCATTGTGGAACAGGGC
ACCCATCATGAGTTGATTGAGCAAAAGGGCATGTACTTTTCGCTGGTCAACTCGCAGACT
ATCATGAAACAGAATGACGACGGCTCAGACACGGCCGCTGACGACAAACTCGAGGAAGAC
GTGGTGGCAATCCAGTCTCTGACTATGAGCTCCTTCAGTGAAGATGAGGAGGAATACAAC
ACCAAGGAGCAGGGAATCATTGAGATGATTCGATTCGTGTACTCCTACAACAAGGAGGAG
ACCACTTTGCTGCTGATTGGAGGAGCGTGTGCCTTTGTGGGGGGCATTGGCTATCCTGGA
ATGGCCGTCATTTTCGCCAAATGTATCGAGGCCTTCATGACTCCGCCCTCAGGCTATCCC
CACATGCGGTCTCTGATCAACACCTACACCGGTCTCTTCTTTATGATTGCCATGATCGAA
ATGGTGGCCTTTTACGTGGAGATTTCCATTCTCACTCTTGCGGGAGAGCGACTGGTGCGA
AAACTGCGTCTGGCGGTCTTTAAGCAGTTTCTCAGAATGGACATTGGCTTCTTTGACCGA
GAGGAGAACACCACTGGCAGTCTGACTTCGAATCTCGGAAAAGACGCCCACAACGTCCGA
GGACTCTCGGGAACAACGTTTGGCCAGATTCTCGTGTCCATTGTGACCGTGGTGGCCGGA
TTCGTGGTCTCGGTCGTCTTCAACTGGAGAATGGGTCTCATTTGCGGCGCCTGTATCCCC
ATTCTCATTGGATGCGGTTTCTGCAGATACTACGTGCTCACATGGCTCAACAACCGGGCC
AAACTCGCCTACGAGCAGTCCGGCTCCTACGCCTGCGAAAACACCAACGCCATCCGAACC
GTCACCACTCTGACCCGTGAATACCAAGTCTACAAGACTTACAAGGAATCAGTGGAGGGA
CAGGTTCAGGGCTCCAAACGGCCCATTTTCTTCTCGTCCATTCTCTTTGGTCTGTCCCAG
TCCCTGTCGCCTCTCATCATGGGTCTGGCCTTCTGGTACGGCGGAATTCTGCTCAAGCAC
CACACCATTTCGCCCTTCCGTTTCTTCGTGGCCTTCATTGCCATTGTCTTTGGCTCACAG
TCCGCGGGCTCAATCTTCACCTTTGCGCCGGACATGAGCAAGGCCGCCGGAAGCACGCGG
AACATCATGAACGTGCTGGCGGTGGAGCCCGAGATTGACTGGTGGTCCGACCAAGGCACC
AAGATCGACCCCAAGGACGTCAAAGGCAACATTGAGTTCCAAAACGTGCACTTCCGGTAC
CCCACGCGGATGCAGGTGCCGGTTCTTCGAGGTCTCAACCTATCCATCAAACAGGGCCAA
TATGTAGCCCTGGTGGGCTCGTCAGGATGCGGAAAAAGCACCACCGTCGGTCTTCTCGAG
TGCTTCTACCGGCCCACGTCCGGCAAGATTCTTCTGGACGGCCTAGACCTCGCAGACTTG
AACATCAACTCCTATCGCGAGGCGGTGGCTCTGGTGCAGCAGGAACCCATTCTGTTCTCG
GGCACCATCAAAGAGAACATTTTGCTGGGAACACAGGATCCGGACGTGACTGACGAGGTG
GTATACGAGGCTGCTCGAAAATCCAACATCCATGACTTCATCATGTCTTTGCCCGAAGGC
TACGATACCGTGTGTGGCTCCAAGGGTTCTCTGTTGTCTGGAGGCCAGAAACAGAGAATA
GCCATTGCTCGAGCTCTCATCCGCAATCCCAAGATTCTTCTGCTGGATGAGGCGACCTCA
GCTCTGGACTCGGAGTCCGAAAAGGTGGTTCAAGCTGCTCTTGACGCCGCTGCCAAGGGA
CGAACTACCATCGCCATTGCCCACCGACTGTCGACGATCCAGAACGCCGACGTGATTTTC
GTGTTTGAAAACGGAGTCGTTCTTGAGAGTGGAACTCATCAGCAACTTCTGGCAAACAGA
TCAAAGTACTACGAGCTCGTCAAATTGCAGGCCTTGGAAGGTTAG

Coding sequence    

>YALI0A11473g.cds
ATGTCGACCAAAGACCCCTACGAGGGGCTATCTGAGGAGAGCATCGCCATTCTCAAGGCC
CAAACCACCAGTGAGCCCGTCAACGTCAACTACCGCACCTTGCTACTTCGGTATGCCACA
CCTCTGGACAAGGCGGAGATTCTGGTTTCGTACGTCTTTTCGGCCTGTGCGGGAGCGTGT
CTGCCTCTTTTCACCCTGATTTTCGGCTCCATGACCAACGAGTTTGTCCGGTACTTTGTG
GAGGGGGCCACGCCGGCTGAATTCGGCCACCAGATCAACTACCTGGCGCGGTATTTCATC
TATCTTTTTGCAGGCATCTTCGCCTTTTCTTTCCTCGAAACGTACATGCACGTCCAGATG
GGCGAGAAGCTGACCGGCCGGATCCGAGCACATTATCTGGAGGCCATTATGCGCCAGAAC
ATTGGCTTCTTCGACAAGGTCGGAGCCGGAGAAATCACCAACCGAATCACCACAGACACC
AACCTGATCCAGGAGGGCATCAGTGAAAAGGCTGGCCTGATTGTTTCCTCCATTGCCGCC
ATAATTTCGGCCTTCATTATTGGGTTCATCAAGTCGTGGAAGCTGACGCTGATCATGATG
TCGTCGTTTTTCGCCCTACTGTTCGCCATGACTACAGCAGTCTATTTTGTGGTCAAGTTT
GCCAAACTGGCCATTGTTTCCGACGCCAAGGCGTCTTCAGTCGCGGAAGAAGTTCTTGGA
GCCATCAGAAACGTGGTTGCGTTTGGAACCCAGGACAGATTGACCCAAAAGTACGATGAC
CGGCTGGTGGTGTCCATGAAGTACCACATTTTCCGTGGCCGGGGCTCGGCGGCGGCTATT
GCTTCGGTGTGGACCATTGCCTATCTCAACTACGCTCTCTCCTTCTGGGAGGGGTCTCGA
CTCGTGTCTTGGGGACAAGTCAATGTCGGAAACATCATGACCGTGCTGTTTGCCGTCATG
ATTGGAGCTGTCATGGTCGGCAATGTGGCTCCAAACTTGCAGGCCATGGGCTCTGCCATT
GCCTCTGGCCAGAAGATCTTTGAGACCATTGACCGGGTCCCTCCCATCGACAGCTTCTCC
GACAAGGGTCAGAAGCTGGACCAGGTTCACGGCCACATTCAGCTGGAGCACGTCAACTTC
CGGTATCCGTCTCGACCGGATGTTTCTGTTCTGCACGACTTCTCTTTGGAGATCAAACCA
GGGCAGACTGTGGCGCTTGTGGGCGCTTCTGGCAGCGGAAAGTCCACCATTATTGGCATT
CTCGAGCGATTCTACGAAATTCTCGGCGGAAAAGTGACGATTGACGGAGTAGACATTTCT
TCGCTCAACGTGAGATGGCTGCGACAACAGCTGGCTCTGGTGTCACAGGAACCCACTCTT
TTTGGCGTCAGCATCTACGAAAACATTGCCTACGGTTTGATTGGAACTCCCCATGAGAAC
GCTGACCCCGAGAAGAAACGTCAGCTGGTGGAGGATGCTGCCCGTCAAGCCAACGCCTAC
GACTTCATCCAGGACTTGACTGACGGGTTTGAAACCAATGTTGGAGACCGGGGCTTTCTG
CTGTCAGGAGGCCAGAAACAGCGAATTGCTATTGCCCGGGCCATTGTTAGAGAGCCCAAG
ATCTTGTTGCTGGACGAAGCCACTTCTGCACTCGACACCAAGAGTGAAGGCATTGTTCAG
GACGCACTGGACAAGGCAGCGGCGGACAGAACCACCATTGTCATTGCCCATCGTCTCAGC
ACGGTCAAGAACGCCGATCTCATTGTGGTCATGAACAAGGGCAGCATTGTGGAACAGGGC
ACCCATCATGAGTTGATTGAGCAAAAGGGCATGTACTTTTCGCTGGTCAACTCGCAGACT
ATCATGAAACAGAATGACGACGGCTCAGACACGGCCGCTGACGACAAACTCGAGGAAGAC
GTGGTGGCAATCCAGTCTCTGACTATGAGCTCCTTCAGTGAAGATGAGGAGGAATACAAC
ACCAAGGAGCAGGGAATCATTGAGATGATTCGATTCGTGTACTCCTACAACAAGGAGGAG
ACCACTTTGCTGCTGATTGGAGGAGCGTGTGCCTTTGTGGGGGGCATTGGCTATCCTGGA
ATGGCCGTCATTTTCGCCAAATGTATCGAGGCCTTCATGACTCCGCCCTCAGGCTATCCC
CACATGCGGTCTCTGATCAACACCTACACCGGTCTCTTCTTTATGATTGCCATGATCGAA
ATGGTGGCCTTTTACGTGGAGATTTCCATTCTCACTCTTGCGGGAGAGCGACTGGTGCGA
AAACTGCGTCTGGCGGTCTTTAAGCAGTTTCTCAGAATGGACATTGGCTTCTTTGACCGA
GAGGAGAACACCACTGGCAGTCTGACTTCGAATCTCGGAAAAGACGCCCACAACGTCCGA
GGACTCTCGGGAACAACGTTTGGCCAGATTCTCGTGTCCATTGTGACCGTGGTGGCCGGA
TTCGTGGTCTCGGTCGTCTTCAACTGGAGAATGGGTCTCATTTGCGGCGCCTGTATCCCC
ATTCTCATTGGATGCGGTTTCTGCAGATACTACGTGCTCACATGGCTCAACAACCGGGCC
AAACTCGCCTACGAGCAGTCCGGCTCCTACGCCTGCGAAAACACCAACGCCATCCGAACC
GTCACCACTCTGACCCGTGAATACCAAGTCTACAAGACTTACAAGGAATCAGTGGAGGGA
CAGGTTCAGGGCTCCAAACGGCCCATTTTCTTCTCGTCCATTCTCTTTGGTCTGTCCCAG
TCCCTGTCGCCTCTCATCATGGGTCTGGCCTTCTGGTACGGCGGAATTCTGCTCAAGCAC
CACACCATTTCGCCCTTCCGTTTCTTCGTGGCCTTCATTGCCATTGTCTTTGGCTCACAG
TCCGCGGGCTCAATCTTCACCTTTGCGCCGGACATGAGCAAGGCCGCCGGAAGCACGCGG
AACATCATGAACGTGCTGGCGGTGGAGCCCGAGATTGACTGGTGGTCCGACCAAGGCACC
AAGATCGACCCCAAGGACGTCAAAGGCAACATTGAGTTCCAAAACGTGCACTTCCGGTAC
CCCACGCGGATGCAGGTGCCGGTTCTTCGAGGTCTCAACCTATCCATCAAACAGGGCCAA
TATGTAGCCCTGGTGGGCTCGTCAGGATGCGGAAAAAGCACCACCGTCGGTCTTCTCGAG
TGCTTCTACCGGCCCACGTCCGGCAAGATTCTTCTGGACGGCCTAGACCTCGCAGACTTG
AACATCAACTCCTATCGCGAGGCGGTGGCTCTGGTGCAGCAGGAACCCATTCTGTTCTCG
GGCACCATCAAAGAGAACATTTTGCTGGGAACACAGGATCCGGACGTGACTGACGAGGTG
GTATACGAGGCTGCTCGAAAATCCAACATCCATGACTTCATCATGTCTTTGCCCGAAGGC
TACGATACCGTGTGTGGCTCCAAGGGTTCTCTGTTGTCTGGAGGCCAGAAACAGAGAATA
GCCATTGCTCGAGCTCTCATCCGCAATCCCAAGATTCTTCTGCTGGATGAGGCGACCTCA
GCTCTGGACTCGGAGTCCGAAAAGGTGGTTCAAGCTGCTCTTGACGCCGCTGCCAAGGGA
CGAACTACCATCGCCATTGCCCACCGACTGTCGACGATCCAGAACGCCGACGTGATTTTC
GTGTTTGAAAACGGAGTCGTTCTTGAGAGTGGAACTCATCAGCAACTTCTGGCAAACAGA
TCAAAGTACTACGAGCTCGTCAAATTGCAGGCCTTGGAAGGTTAG

Predicted translation product    

>YALI0A11473g.aa
MSTKDPYEGLSEESIAILKAQTTSEPVNVNYRTLLLRYATPLDKAEILVSYVFSACAGAC
LPLFTLIFGSMTNEFVRYFVEGATPAEFGHQINYLARYFIYLFAGIFAFSFLETYMHVQM
GEKLTGRIRAHYLEAIMRQNIGFFDKVGAGEITNRITTDTNLIQEGISEKAGLIVSSIAA
IISAFIIGFIKSWKLTLIMMSSFFALLFAMTTAVYFVVKFAKLAIVSDAKASSVAEEVLG
AIRNVVAFGTQDRLTQKYDDRLVVSMKYHIFRGRGSAAAIASVWTIAYLNYALSFWEGSR
LVSWGQVNVGNIMTVLFAVMIGAVMVGNVAPNLQAMGSAIASGQKIFETIDRVPPIDSFS
DKGQKLDQVHGHIQLEHVNFRYPSRPDVSVLHDFSLEIKPGQTVALVGASGSGKSTIIGI
LERFYEILGGKVTIDGVDISSLNVRWLRQQLALVSQEPTLFGVSIYENIAYGLIGTPHEN
ADPEKKRQLVEDAARQANAYDFIQDLTDGFETNVGDRGFLLSGGQKQRIAIARAIVREPK
ILLLDEATSALDTKSEGIVQDALDKAAADRTTIVIAHRLSTVKNADLIVVMNKGSIVEQG
THHELIEQKGMYFSLVNSQTIMKQNDDGSDTAADDKLEEDVVAIQSLTMSSFSEDEEEYN
TKEQGIIEMIRFVYSYNKEETTLLLIGGACAFVGGIGYPGMAVIFAKCIEAFMTPPSGYP
HMRSLINTYTGLFFMIAMIEMVAFYVEISILTLAGERLVRKLRLAVFKQFLRMDIGFFDR
EENTTGSLTSNLGKDAHNVRGLSGTTFGQILVSIVTVVAGFVVSVVFNWRMGLICGACIP
ILIGCGFCRYYVLTWLNNRAKLAYEQSGSYACENTNAIRTVTTLTREYQVYKTYKESVEG
QVQGSKRPIFFSSILFGLSQSLSPLIMGLAFWYGGILLKHHTISPFRFFVAFIAIVFGSQ
SAGSIFTFAPDMSKAAGSTRNIMNVLAVEPEIDWWSDQGTKIDPKDVKGNIEFQNVHFRY
PTRMQVPVLRGLNLSIKQGQYVALVGSSGCGKSTTVGLLECFYRPTSGKILLDGLDLADL
NINSYREAVALVQQEPILFSGTIKENILLGTQDPDVTDEVVYEAARKSNIHDFIMSLPEG
YDTVCGSKGSLLSGGQKQRIAIARALIRNPKILLLDEATSALDSESEKVVQAALDAAAKG
RTTIAIAHRLSTIQNADVIFVFENGVVLESGTHQQLLANRSKYYELVKLQALEG*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites