YALI0A09988g


similar to uniprot|P35999 Saccharomyces cerevisiae YKL134c (MIP1) mitochondrial intermediate peptidase

Genomic environment map

Element type: CDS
Element length: 2331 nucleotides,
on sense strand of
Yali0A: 1009201..1011531.
Other names:
YALI-CDS0900.1
YALI-IPF10151
Coding sequence: 777 codons.
Database cross references:
EMBL: CR382127
GeneID: 2905768
GenomeReviews: CR382127_GR
HOGENOM: HBG562792

Computed results  

None available yet


Homologs and Orthologs

Homologs in protein family: GL3C2743
Orthologs: strict determination not possible; homologs must be refined manually

Protein YALI0A09988p  


similar to uniprot|P35999 Saccharomyces cerevisiae YKL134c (MIP1) mitochondrial intermediate peptidase; RecName: Full=Mitochondrial intermediate peptidase; Short=MIP; EC=3.4.24.59; AltName: Full=Octapeptidyl aminopeptidase; Flags: Precursor;

Protein domain map

Protein length: 776 amino acids
Protein family: GL3C2743
Database cross references:
Gene3D: G3DSA:1.10.1370.10
Gene3D: G3DSA:3.40.390.10
InterPro: IPR001567
InterPro: IPR024077
InterPro: IPR024079
KEGG: yli:YALI0A09988g
MEROPS: M03.006
PROSITE: PS00142
Pfam: PF01432
RefSeq: XP_499926.1
UniProtKB/Swiss-Prot: Q6CHD6
UniProtKB: PMIP_YARLI

Computed results for YALI0A09988p  

None available yet

Gene Ontology terms  


Sequence data  


Nucleotide sequence    

>YALI0A09988g.nt
ATGAGACGATTTTCGACCTTGTCGCGTCGCCTTCAAAGGGTTGTACCGGCATCTTCAGCC
TCGACCGCCAATACAAGTCCTTCTCCTGCACTCTACACTGGTCTAGAGCCCAAGATCAAG
GAGTCACAAGATTCGCTAATTCGGGCGGTTTTTGATAACGGCGATGTGTGGCAGGATTTC
TCGCAAAAGTCTGTGGCAAAGCCCAAGCAATCTCGTAGCATTACGGGATTTATCAACTAC
CTGACCAACGAATCTGATTACGAAACGGGGCTATTTATGAACGATTTCCTCAAGACCCCC
GCGGGATTTCAGAAGTACACTGCAGCCTCAATCGAAGAGGCGGGCCAGTTGATTCAGCAG
CTTCTAGGAGCGCTTACCCAGCGAGACAAGCTGCGACACGCCATTACCACATTTGACAGA
CTATCCGACGTTTTGTGTCAAGTTATCGATCTGGCTGAGTTCATTCGCGCAGCTCATCCG
GAACAGCATTTTGTGCAAGCTGCTCAGGAGGCACACGAACAAATGTACGAGTACATGAAC
GTCCTCAACACTTCTGTGGAGCTGTACACTGTACTCGACATGGTCTTCAAAGATTCCGAG
ATTGTCAATCAGCTCACCCATGAGGAAAAGGTAGTAGGAACTCTCCTACTGGAGGATTTC
AAGAAAAGTGGAGTAACCCTGGACGACGCTGGACGGGAAAACTTCGTTTCATTAACTACT
AAGATCTCATTACTTGGTCGGGACTTCATCTCCTCCAACCATCCTAAGGAGGATTACATC
ACTCTCACCCAGGGTGAGGCCCAGGGGCTGGACCCACAACTTGCACAGCAGTTATCCCAG
GGGAACTCCGTTTACGTTCCTACTGGTGGTGTTCCCGGGCAACTGGCTCTGAGAGGCATG
AAAAACGAAAATTCGCGAAAATTGCTTTGGTCTAAAATGAGGGAGTCGTCAGACAAATCT
ATTGAATCGTTGGAAGACTTACTTGTTAGCCGCCTGGAACTGGCCAATCTAATGGGAAAG
GAATCGTACGCTGATTATCTGCTTTCAGACAAAATGGCTGGTAATCCTGAAAATGTGATG
AGATTTCTTAACGGCCTCCTAGATAAGACACTTCCTGGCGCCAAAAAAGAGCTCTCTGTG
CTTGAGCAAATCAAAAAGCAGGCGACTGGGAACCCCAAAAGCATCCTGCAGGCATGGGAC
AAGTCTTATTACGCCTCCCAGCTACTCTACCAAAAGAGAAACAAGACGAAGACAGCCCAC
ATGCTAAGTGAATACTTTTCCGTGGGAACTGTGGTTCAAGGCCTTAGTCGGATCTTTGAC
AAGATTTATGGTATCAGGTTTGTACCGACTGAGACCAAAACAGGCGAAACATGGCATCAC
GATGTCCGACGACTCGACGTGGTATCTGAAACAGAGGGTCTGATCGGCATCATGTACGCT
GATTTGTTCCAGCGGGAGGGTAAATCTCCCAATCCTGCACACTTTACTGTTCGTTGTTCG
CGCGAGATCTACCCGGACGAGTTGGCCCACATGAGCAGTAGTCCTATTGCCAAGGTTCCA
ACACTGAATCTCAATGGCAAGGTGTTCCAAATTCCAACCATCGCTCTCATTTGTGATTTC
ACTACTCCCCATGACCTCTACCCTTCGTTGCTGTCGTATCAGGAGGTTGAGACACTATTC
CACGAAATGGGACATGCCATTCATTCTATGCTGGGGCGCACATCGCTCCACAATGTGTGT
GGAACTCGGTGTGCCACCGACTTTGTTGAGCTTCCTTCTGTCTTCATGGAGAACTTCGCA
TCTAACCCTGAGTCACTTGCGCTCTTTGCACGACACTATTCTTCAGATAGCCCTCTTCCT
TACCAACAGCTGGAGCGCCATTTGAACGAACAGTCGTATTTTAAGGACGTTGAGCAGTAT
ACCCAAATTAAGATGGCTATGTTGGATCAGGTGTTGCATGGAAATATTTTAAAGAGTATC
ACAAATGGACACTTCAACTCACAAAAGCTATACGACAATCTTGAGAAGGATAGACCGCTA
TTTCCTCCTTCCCCATCCTCTTGGCACGGATCGTTCGGTCATCTTTTTGGTTACGGTGCG
TCCTACTACTGTTATCTGCTTGACCGTCAAATGGCTGACATCGTCTGGAAGAAGCTGTTC
TCAAAGAACCCGCTATCTCGTGACGCGGGATCCAGAATGAAAAACGAAGTTCTGCAGTGG
GGAGGATCTCGAGATCCTTGGGAGTGTATTGCTGGTGTTCTTGAAGATCCCGAACTAGCA
AAGGGTGGCTCGCAAGCGATGGAGAAGATTGGAAATTACGACAAACATTGA

Coding sequence    

>YALI0A09988g.cds
ATGAGACGATTTTCGACCTTGTCGCGTCGCCTTCAAAGGGTTGTACCGGCATCTTCAGCC
TCGACCGCCAATACAAGTCCTTCTCCTGCACTCTACACTGGTCTAGAGCCCAAGATCAAG
GAGTCACAAGATTCGCTAATTCGGGCGGTTTTTGATAACGGCGATGTGTGGCAGGATTTC
TCGCAAAAGTCTGTGGCAAAGCCCAAGCAATCTCGTAGCATTACGGGATTTATCAACTAC
CTGACCAACGAATCTGATTACGAAACGGGGCTATTTATGAACGATTTCCTCAAGACCCCC
GCGGGATTTCAGAAGTACACTGCAGCCTCAATCGAAGAGGCGGGCCAGTTGATTCAGCAG
CTTCTAGGAGCGCTTACCCAGCGAGACAAGCTGCGACACGCCATTACCACATTTGACAGA
CTATCCGACGTTTTGTGTCAAGTTATCGATCTGGCTGAGTTCATTCGCGCAGCTCATCCG
GAACAGCATTTTGTGCAAGCTGCTCAGGAGGCACACGAACAAATGTACGAGTACATGAAC
GTCCTCAACACTTCTGTGGAGCTGTACACTGTACTCGACATGGTCTTCAAAGATTCCGAG
ATTGTCAATCAGCTCACCCATGAGGAAAAGGTAGTAGGAACTCTCCTACTGGAGGATTTC
AAGAAAAGTGGAGTAACCCTGGACGACGCTGGACGGGAAAACTTCGTTTCATTAACTACT
AAGATCTCATTACTTGGTCGGGACTTCATCTCCTCCAACCATCCTAAGGAGGATTACATC
ACTCTCACCCAGGGTGAGGCCCAGGGGCTGGACCCACAACTTGCACAGCAGTTATCCCAG
GGGAACTCCGTTTACGTTCCTACTGGTGGTGTTCCCGGGCAACTGGCTCTGAGAGGCATG
AAAAACGAAAATTCGCGAAAATTGCTTTGGTCTAAAATGAGGGAGTCGTCAGACAAATCT
ATTGAATCGTTGGAAGACTTACTTGTTAGCCGCCTGGAACTGGCCAATCTAATGGGAAAG
GAATCGTACGCTGATTATCTGCTTTCAGACAAAATGGCTGGTAATCCTGAAAATGTGATG
AGATTTCTTAACGGCCTCCTAGATAAGACACTTCCTGGCGCCAAAAAAGAGCTCTCTGTG
CTTGAGCAAATCAAAAAGCAGGCGACTGGGAACCCCAAAAGCATCCTGCAGGCATGGGAC
AAGTCTTATTACGCCTCCCAGCTACTCTACCAAAAGAGAAACAAGACGAAGACAGCCCAC
ATGCTAAGTGAATACTTTTCCGTGGGAACTGTGGTTCAAGGCCTTAGTCGGATCTTTGAC
AAGATTTATGGTATCAGGTTTGTACCGACTGAGACCAAAACAGGCGAAACATGGCATCAC
GATGTCCGACGACTCGACGTGGTATCTGAAACAGAGGGTCTGATCGGCATCATGTACGCT
GATTTGTTCCAGCGGGAGGGTAAATCTCCCAATCCTGCACACTTTACTGTTCGTTGTTCG
CGCGAGATCTACCCGGACGAGTTGGCCCACATGAGCAGTAGTCCTATTGCCAAGGTTCCA
ACACTGAATCTCAATGGCAAGGTGTTCCAAATTCCAACCATCGCTCTCATTTGTGATTTC
ACTACTCCCCATGACCTCTACCCTTCGTTGCTGTCGTATCAGGAGGTTGAGACACTATTC
CACGAAATGGGACATGCCATTCATTCTATGCTGGGGCGCACATCGCTCCACAATGTGTGT
GGAACTCGGTGTGCCACCGACTTTGTTGAGCTTCCTTCTGTCTTCATGGAGAACTTCGCA
TCTAACCCTGAGTCACTTGCGCTCTTTGCACGACACTATTCTTCAGATAGCCCTCTTCCT
TACCAACAGCTGGAGCGCCATTTGAACGAACAGTCGTATTTTAAGGACGTTGAGCAGTAT
ACCCAAATTAAGATGGCTATGTTGGATCAGGTGTTGCATGGAAATATTTTAAAGAGTATC
ACAAATGGACACTTCAACTCACAAAAGCTATACGACAATCTTGAGAAGGATAGACCGCTA
TTTCCTCCTTCCCCATCCTCTTGGCACGGATCGTTCGGTCATCTTTTTGGTTACGGTGCG
TCCTACTACTGTTATCTGCTTGACCGTCAAATGGCTGACATCGTCTGGAAGAAGCTGTTC
TCAAAGAACCCGCTATCTCGTGACGCGGGATCCAGAATGAAAAACGAAGTTCTGCAGTGG
GGAGGATCTCGAGATCCTTGGGAGTGTATTGCTGGTGTTCTTGAAGATCCCGAACTAGCA
AAGGGTGGCTCGCAAGCGATGGAGAAGATTGGAAATTACGACAAACATTGA

Predicted translation product    

>YALI0A09988g.aa
MRRFSTLSRRLQRVVPASSASTANTSPSPALYTGLEPKIKESQDSLIRAVFDNGDVWQDF
SQKSVAKPKQSRSITGFINYLTNESDYETGLFMNDFLKTPAGFQKYTAASIEEAGQLIQQ
LLGALTQRDKLRHAITTFDRLSDVLCQVIDLAEFIRAAHPEQHFVQAAQEAHEQMYEYMN
VLNTSVELYTVLDMVFKDSEIVNQLTHEEKVVGTLLLEDFKKSGVTLDDAGRENFVSLTT
KISLLGRDFISSNHPKEDYITLTQGEAQGLDPQLAQQLSQGNSVYVPTGGVPGQLALRGM
KNENSRKLLWSKMRESSDKSIESLEDLLVSRLELANLMGKESYADYLLSDKMAGNPENVM
RFLNGLLDKTLPGAKKELSVLEQIKKQATGNPKSILQAWDKSYYASQLLYQKRNKTKTAH
MLSEYFSVGTVVQGLSRIFDKIYGIRFVPTETKTGETWHHDVRRLDVVSETEGLIGIMYA
DLFQREGKSPNPAHFTVRCSREIYPDELAHMSSSPIAKVPTLNLNGKVFQIPTIALICDF
TTPHDLYPSLLSYQEVETLFHEMGHAIHSMLGRTSLHNVCGTRCATDFVELPSVFMENFA
SNPESLALFARHYSSDSPLPYQQLERHLNEQSYFKDVEQYTQIKMAMLDQVLHGNILKSI
TNGHFNSQKLYDNLEKDRPLFPPSPSSWHGSFGHLFGYGASYYCYLLDRQMADIVWKKLF
SKNPLSRDAGSRMKNEVLQWGGSRDPWECIAGVLEDPELAKGGSQAMEKIGNYDKH*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites