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Element type: CDS
Element length: 1401 nucleotides,
on anti-sense strand of
Sakl0H: complement(2302425..2303825).
Other names:
SAKL-ORF14
Coding sequence: 467 codons.
Element length: 1401 nucleotides,
on anti-sense strand of
Sakl0H: complement(2302425..2303825).
Other names:
SAKL-ORF14
Coding sequence: 467 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0576 GL3C0576.F1 GL3C0576.N1Orthologs by synteny: ZYRO0G07480g ERGO0D14784g
Protein SAKL0H26180p 
Protein domain map
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>SAKL0H26180g.nt GTGTCGAAAAGTGAGAGTGGTACCAGTAAGTGCCCCATTGCTCTTTACCTAATTTGACTT TGTAAGTGTATGTACCACCATTTGCTGGTATGGCGCATTGATTTATGAAAGCTGCACCAT CATTATAACTATCTTCTTGGTTAAAAAAAAGCCCATGACAATGGATAGTGACAGGTTCCA GCGACATATGATTTTGAACATGGATGTAAAGCGTATCACCTGCATTAGCTTCAACAAGTG GCCCCGGGTATTGTCCATTAATCACTGTTAAATTACGAACAATACCATCAGAAGCCTTTT CTAAAAGAGTCGAAACATTAAAATAATAGTGTCTTTCTTTGGGTTCGGTCTCTTTTCTCC AATATAAAGTGTCCATTGTATAATTTTTAGCAGTATCTAGCCTCCAATCGTGAATTTCAG GCACATCGCTATCTTTAGTAGCTTCCTTAATGACAAAAGCCAATAGTGCTGCAAAAGCAC CTGCAAAAAGCACACATTCAAGCACTTTAAACCAAAGCGGACGGTATCTTACAGGTGTGG TACTTTCCAAATCTACAACGTCCTCTTCTTCGCTACATACCAAATGGCGATCTTTGGAAA AAAAGTTCATTTTCTGGACGCACATTAAAGCAAGAGACAAGCACTAAATACTGTATTTTG CACTCTTTTTATTTATTTTCAGAATATACATGCACTTTTCATTGACGTGTTATAGAGAGC CCATGTGGCTCTATATTTAAAGACTTAAAAATATATTTTTCCGAGATTCCGTGCCAAGAA AAAGCCAGATGAAAATCATCAAGCCTCATAATTTTTCTTTGCATGCCAGAGTTTAAATTG AGCCAACTACAACACGTTGATGATATCACTGACACGTTGCTCATTAATATACACGTGTGA GTTTATGTAATTAAGAAGGAGAAAAATAAACATATAAAATATCCTACTATCTAGAATGAT TTATATTATTCTTGTACTTTGGATTACGTAAGTCAACACAATGAGAATCGTTTCACCAGT TACCTTTGCCACCGCTGCAATTCTGCCATCATGTTTGGCTGCCACCTCATCATATGCTAT TAGGACGTATAGTACCGTCGATCTTTCTGCCTCCAAGATCGCGGAGACCCAACAGGTTGC CAAAACTAATCATGTCTCTTCAAATATTCCCGGATCCGCTTTTGACAGATTTGTTGTCAT TTGGTTGGAAAACACTGATTATAACAAAGCTGCCGGCGATGAAAATATAGCTTGGTTGGC TGAGCAAGGTATTGTTTTGGACAATTACTGGGCATTAACTCATCCTTCCGAACCAAACTA TCTAGCTTCTGTTAGTGGCGACTACTTTGCCTTAGATGACGATAGATTCATCGCAATGCC AAGCAATATTTCCACCATTGTCGATTTACTAGATACCAAAAACATTTCTTGGGCTGAATA CCAGGAGCACTTACCATATACAGGGTTTCTAGGTTTCAATTACTCAAATCAAGAAAACTT CGCGAATGATTACGTGAGAAAGCATAACCCGTTGGTTTTATTTGACTCTATAACTAATGA TGAAGACAGATTGGCTAACATCAAAAACTTCACTGAGTTTTACAGTGATTTAGAAGATAG GAAGTTACCACAATATTCCATTATTACCCCAAATATGACTAATGATGGCCATGACACTAC TATCAAGGTTGCCGGCCAATGGTCTAGAAATTTCTTAGAGCCGCTTTTATCCGATGATTA CTTTATGAATAATACTGCAGTCTTGTTAACCTTTGATGAGAACGAAACATACTCTGTGAA AAACAAAGTATTTTCAATTTTGTTAGGGGGTGCTATTCCCGAAGAGCTCAAAGGTACTAC TGACTCGACTTATTACGATCACTATTCCCAAATTTCATCAGTTGAAGCCAACTGGAATTT GCCATCATTAGGTAGACACGATGCCACTGCTAATGTTTTACAATTGGTCGCGAATGCTAC AAATATTACAAATGAAGAAGTTGATACCACCTTTAAGCTCAACAACGCAACTTACATTGG TTATTTGAAGAACGATCAGATCGATTTGCCAGCCCCAAATGTTACTATTATTAACAAAAA TGGTAGAGGTGTTCTTCAAAAAGTTGTCGACAGGTGGTCAAAAGAATATTCGGCGCAAAT TTCTGCGTCTTATTTTACTTCTACTACTACTACTGTGTCTGGTACTCAACTAGAAGATGC TGCCACTTTGGCATCCAAGACTTCTATTTCCGCTAGTGTCACCGACTCGGCAACTACAGC GGTTAAAAATGGAACTTCTTCATCTGCTACGTCTTCATCCCAAGGTGCAGGTGCTACTAA CATTTCTACTCCACGTTGGATTTCGATCGTAACCTTTATTGCTGGTATTGCCTTCTTATA AGCCTCTTTAAGAACGAGAGAGAAAAAGTTTATATATCAGAGCTACGATTATCCTCATGG CTCTAAAACGGGATCTTTTCCAACTTATTTTGTTAAAGTAAATTATTTATTCGACATGTG TTTCTAGTATAAGGAAGCCATTCAATTTAAGCAAATTATAAAATCTTCAATAATTTGACT CTTTATGAGGCCTCATCCCACTCAGTGAAAAATTAAGAGTTTAGACGGTTTATATAACGA ACATTTGATAACCAGCTAAGCACAAGTAACCTCATTAAGGTTCACAGTTTATTGGTGCTT C
Coding sequence
>SAKL0H26180g.cds ATGAGAATCGTTTCACCAGTTACCTTTGCCACCGCTGCAATTCTGCCATCATGTTTGGCT GCCACCTCATCATATGCTATTAGGACGTATAGTACCGTCGATCTTTCTGCCTCCAAGATC GCGGAGACCCAACAGGTTGCCAAAACTAATCATGTCTCTTCAAATATTCCCGGATCCGCT TTTGACAGATTTGTTGTCATTTGGTTGGAAAACACTGATTATAACAAAGCTGCCGGCGAT GAAAATATAGCTTGGTTGGCTGAGCAAGGTATTGTTTTGGACAATTACTGGGCATTAACT CATCCTTCCGAACCAAACTATCTAGCTTCTGTTAGTGGCGACTACTTTGCCTTAGATGAC GATAGATTCATCGCAATGCCAAGCAATATTTCCACCATTGTCGATTTACTAGATACCAAA AACATTTCTTGGGCTGAATACCAGGAGCACTTACCATATACAGGGTTTCTAGGTTTCAAT TACTCAAATCAAGAAAACTTCGCGAATGATTACGTGAGAAAGCATAACCCGTTGGTTTTA TTTGACTCTATAACTAATGATGAAGACAGATTGGCTAACATCAAAAACTTCACTGAGTTT TACAGTGATTTAGAAGATAGGAAGTTACCACAATATTCCATTATTACCCCAAATATGACT AATGATGGCCATGACACTACTATCAAGGTTGCCGGCCAATGGTCTAGAAATTTCTTAGAG CCGCTTTTATCCGATGATTACTTTATGAATAATACTGCAGTCTTGTTAACCTTTGATGAG AACGAAACATACTCTGTGAAAAACAAAGTATTTTCAATTTTGTTAGGGGGTGCTATTCCC GAAGAGCTCAAAGGTACTACTGACTCGACTTATTACGATCACTATTCCCAAATTTCATCA GTTGAAGCCAACTGGAATTTGCCATCATTAGGTAGACACGATGCCACTGCTAATGTTTTA CAATTGGTCGCGAATGCTACAAATATTACAAATGAAGAAGTTGATACCACCTTTAAGCTC AACAACGCAACTTACATTGGTTATTTGAAGAACGATCAGATCGATTTGCCAGCCCCAAAT GTTACTATTATTAACAAAAATGGTAGAGGTGTTCTTCAAAAAGTTGTCGACAGGTGGTCA AAAGAATATTCGGCGCAAATTTCTGCGTCTTATTTTACTTCTACTACTACTACTGTGTCT GGTACTCAACTAGAAGATGCTGCCACTTTGGCATCCAAGACTTCTATTTCCGCTAGTGTC ACCGACTCGGCAACTACAGCGGTTAAAAATGGAACTTCTTCATCTGCTACGTCTTCATCC CAAGGTGCAGGTGCTACTAACATTTCTACTCCACGTTGGATTTCGATCGTAACCTTTATT GCTGGTATTGCCTTCTTATAA
Predicted translation product
>SAKL0H26180g.aa MRIVSPVTFATAAILPSCLAATSSYAIRTYSTVDLSASKIAETQQVAKTNHVSSNIPGSA FDRFVVIWLENTDYNKAAGDENIAWLAEQGIVLDNYWALTHPSEPNYLASVSGDYFALDD DRFIAMPSNISTIVDLLDTKNISWAEYQEHLPYTGFLGFNYSNQENFANDYVRKHNPLVL FDSITNDEDRLANIKNFTEFYSDLEDRKLPQYSIITPNMTNDGHDTTIKVAGQWSRNFLE PLLSDDYFMNNTAVLLTFDENETYSVKNKVFSILLGGAIPEELKGTTDSTYYDHYSQISS VEANWNLPSLGRHDATANVLQLVANATNITNEEVDTTFKLNNATYIGYLKNDQIDLPAPN VTIINKNGRGVLQKVVDRWSKEYSAQISASYFTSTTTTVSGTQLEDAATLASKTSISASV TDSATTAVKNGTSSSATSSSQGAGATNISTPRWISIVTFIAGIAFL*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0H26180p