HomeSAKL0H23650g
similar to uniprot|P53178 Saccharomyces cerevisiae YGL047W ALG13 Catalytic component of UDP-GlcNAc transferase, required for the second step of dolichyl-linked oligosaccharide synthesis
Element type: CDS
Element length: 597 nucleotides,
on anti-sense strand of
Sakl0H: complement(2045042..2045638).
Other names:
SAKL-ORF305
Coding sequence: 199 codons.
Element length: 597 nucleotides,
on anti-sense strand of
Sakl0H: complement(2045042..2045638).
Other names:
SAKL-ORF305
Coding sequence: 199 codons.
Homologs and Orthologs
Homologs in protein families: GL3R1263 GL3R1263.F1 GL3R1263.N2Orthologs by synteny: ZYRO0G22352g KLTH0D03828g KLLA0A04774g ERGO0G07436g
Protein SAKL0H23650p 
similar to uniprot|P53178 Saccharomyces cerevisiae YGL047W
Protein domain map
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>SAKL0H23650g.nt GATTTCATCCATGAAAATGATGGATGGAGCATGTTCCCTTGCCATCACGAATAGCTCACG CACCATACGAGAGCCTTCACCGATGTATTTTTGAACCAACTCTGCACCGCTCACTCTAAT GAACTTACAGTCTGTGTGATGGGCCACCGCTCTTGCTAGCAACGTCTTACCGGTACCTGG AGGGCCATATAAGATGACACCCTTTGGCTGAGCAATACCCAGGCTTTCAAATAGCTCAGG ATGCTTTACAGGAAGCTCGATGACCTCTTTGATCTCTTTGATCTGCTTGGTTAACCCACC AACCATATCGTAAGTGGAATCCGGAACCTTCTCTACCATCATCAACGACACCAATGGGTC GACCTTATTTTCTAAAACCTTGTGTAAGGTGTATGAGTCACTCTTTAAGCAAACACGCTG TGAGGTTTTCAAATCCTTCACGTCGATATCCTTGGCGATATCGACGATATACTTTCCCTC GGGTTGAATCTTCACGAGAACTTTTTTGTCAGAAACAACTTTGACAACCTCACCAACATA CGAGCCGGGTTCCTGTAGTAGACGTAGCTCATCTTTTATGAAGCGTACTTTATCGTTCAG ACTGTTCCTCTGTGCTTCCAACCTGCGCAAGTTCTCCGTCTTTGCACGGATCTTCAACTC CGTCTCTTGGATTTTTTGTTCGAAATAAGGCTTGATACCGCTCTCGTGGGTATTCAATGG GACTGTTGTAGCAGTAGTGACACTAGTGGCGGCCATAGTTGCTCTTTGCTTTTATGCTTT CCCTTGCGTTGTTGTAGTTGCCCAAGGGCAGATTAGGCTTATTTTGCCACCCAAAAGGAA AGCTTTCGACTAGAGTATTCCCAACTCACGTATAAAACGACACAAACACACATGTGTATA ATACCGATTGGCTCTTTCTTAAAAGGTGTATTACCCATACCCGCTGGTTCTTGCGAGACA GTGCAGAGCCAGCGGAGTGGTCAAAGAGATTGTCGTTGTAATGACAGCAGGTAAGAACAT ACTCGTGACTTGCGGAGCCACCGTGCCGTTTCCAACTTTGGTGAAAGTGCTACTGCAACG GCAGACGCTAGACCATTTGAAGAGCATGGCATTCGTCAAAGTCATCGTCCAGTTTGGAAA GGGTTTTAGCGATGAATTTGAAAGAATTTTAAATGGTATAAACGACGGGGAAGGCGGTAC CATTTCCGTAGAGTTGGAAACTCTTGGTACCGAACGTGTTTTACATGGATGGTACAAGGG AGTGGAGATCATCGGTTTAGAATTCACTCCGAACATAGAGGCCCTGATCAAACTATACGC AGACGTGGTGATTTCCCATGCAGGAACCGGATCCATTTTGGACTCTCTGAGGTTAAAGAA ACCGCTGATTGCTGTGGTCAATGACACCTTGATGGACAACCACCAAGAGCAAATTGCCAG GAAATTCGAATCCAAAGGTTATCTATGGGCTGTGTATGCTACAGAGCAAGAAATCATAGC TGCTTTGGATAAGAGTGAATGCGAAACACTCACGGAGTTGCCAGATGGATACAACCGTGG ATTCGAACAATTGCTATTAAACGTAGCGTTTGAATGAGTAATTTGCTTATCATGTCGTTT TAACAAGCAGCGAGATGAGATATGGCAGAGAGTGAATCTACAGAAAAAAAAAAATAAACA AGTTCAGATCCTTACAGTTTTAAATCCCAGGACACAGAATACGGGCATATGTGTTGAGCC TGTTTCAGCTGACGCAATTGTTGCGTCGACACCTGCCCGGTACGCAAAGCGGAATCCGGA GAAACCTCCAACGATGAGTAGTGCCTACAGAGTAAAATCGTGGTTCCGAATCTACGCGCG ACCAAAAAGTCACTTGCGAAACCCTAGCATAACAATT
Coding sequence
>SAKL0H23650g.cds ATGACAGCAGGTAAGAACATACTCGTGACTTGCGGAGCCACCGTGCCGTTTCCAACTTTG GTGAAAGTGCTACTGCAACGGCAGACGCTAGACCATTTGAAGAGCATGGCATTCGTCAAA GTCATCGTCCAGTTTGGAAAGGGTTTTAGCGATGAATTTGAAAGAATTTTAAATGGTATA AACGACGGGGAAGGCGGTACCATTTCCGTAGAGTTGGAAACTCTTGGTACCGAACGTGTT TTACATGGATGGTACAAGGGAGTGGAGATCATCGGTTTAGAATTCACTCCGAACATAGAG GCCCTGATCAAACTATACGCAGACGTGGTGATTTCCCATGCAGGAACCGGATCCATTTTG GACTCTCTGAGGTTAAAGAAACCGCTGATTGCTGTGGTCAATGACACCTTGATGGACAAC CACCAAGAGCAAATTGCCAGGAAATTCGAATCCAAAGGTTATCTATGGGCTGTGTATGCT ACAGAGCAAGAAATCATAGCTGCTTTGGATAAGAGTGAATGCGAAACACTCACGGAGTTG CCAGATGGATACAACCGTGGATTCGAACAATTGCTATTAAACGTAGCGTTTGAATGA
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0H23650g