HomeSAKL0H13090g
similar to uniprot|P32501 Saccharomyces cerevisiae YDR211W GCD6 Catalytic epsilon subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for eIF2
Element type: CDS
Element length: 2184 nucleotides,
on anti-sense strand of
Sakl0H: complement(1125883..1128066).
Other names:
SAKL-ORF1370
Coding sequence: 728 codons.
Element length: 2184 nucleotides,
on anti-sense strand of
Sakl0H: complement(1125883..1128066).
Other names:
SAKL-ORF1370
Coding sequence: 728 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0213 GL3C0213.F1 GL3C0213.N2Orthologs by synteny: ZYRO0A09284g KLTH0F07942g KLLA0A04235g ERGO0G06292g
Protein SAKL0H13090p 
similar to uniprot|P32501 Saccharomyces cerevisiae YDR211W GCD6 Catalytic epsilon subunit of the translation initiation factor eIF2B the guanine-nucleotide exchange factor for eIF2 activity subsequently regulated by phosphorylated eIF2 first identified as a negative regulator of GCN4 expression
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>SAKL0H13090g.nt GAACAATAAAATATAAAAGGAAAGAGAATATATGAATAATTGTATATAGGATTACCGACT CTCTTTTCTGGTTTCCTAGAAAGGTGAGGAGAACTTCTAGTATAACTATATACCAAATTA TTATAGCCTTAACCAAAAAATGGGATCTCAACAATTGCCCCAATATTCACATATTTCTCA ATAAATAATCATATAAATAATATAAAGAGGTTCAATTATTCATTTTGCACTGATCTGAAA CTAATTTAAATATTTTACCTGAGATATAGGTGAATATTGGGACAATTGTTGAGATTCCAT TTTTGATTAAGGCTATAATAATTGGTATATGGTTATACTAGAAGTTCTCCTCGTCTTTCT AGGAATCCAGAAAAGAGAGTCGATAACTTTATATACAAATACTCTTCCTTTTATATGTTT CTGGTTCATTATCCTATTACATTATCAATCCTTGCGTTTCAGCTTCCACTAATTTAGATG ACTGTTTCTCATTCTTTATGTCACCTTATAACACCGTGTGTGATAATATACTAGTAACAC GAATACTAGTCGATGGTCGATAGTTGTATTTCGTTCCAACATTACCTTACTGTAGATGAT TATTTGTGTTTATATGCTTTTTAAATTTCAAGGTATAAGTATGCTCCGTTGATCACCAAA CCTTTGAAAATGCTCGTGTAGCTCAGTGGTTAGAGCTTCGTGCTTATAGAAGCATTCGGC ATCTCCGAAGCATTCTGTGAATATTGACCGTTAACACGGCCACATCCCCATCTGGCTTCG GCCAGGCTCGGATGAACACAAAGCAACGCGACCGTCGTGGGTTCGAACCCCACCTCGAGC ACTTTCTTTTTGTATTTTTCTTTAGATCTCTCTACTAAGGGAGGGTAATCTCTGTGCTAA AATTTTTCAGACAAGGAACATCTCTATAATCGATCTTGAACGGATGAGTAAGATATCAAT TGTTTCATATTTTGTATACTAATCACAAAATTGTTTAAGAATGGCGGGAAAAAAGAACAA GTCACACAATAACGGCTCTAAGCATGGCAAAAAGACCGAACTTGTTCAAGATGAGCGTCT ACAGGCTATTGTCCTTACTGATTCTTTCGAAACAAGGTTTATGCCATTGACCTCTGTTAA GCCGAGGTGCCTATTACCATTAGCCAATGTCCCATTGATTGAGTACACTCTGGAATTTTT GGCCAAGGCCGGTGTAAATGAAGTTTATCTGATTTGTGCTTCACATGCTGAACAGGTTAA TGAGTACATTGAAAACTCCAAATGGAACTTGCCGTGGTCTCCTTTCAAAGTCTCTACAAT CATGTCTCTGGAGTCAAGATCTGTCGGTGATGCAATGAGAGATTTGGATAACAGAGGTTT AATTACAGGTGATTTCATCCTAGTGAGTGGTGACTTGGTTACTAACATGGAATTTGACAA AGCATTGGAGGCCCACAGAAAGCAACGCGCAACAGACAAAGATCATATTGTAACGATGTG CTTGAGCAAAGCCAGCCAATATCATAGAACCAGATCCTACGAACCCTCGACCTTTATTTT TGATAAATCAAATAACAGATGTTTATACTATCAAGAGATTCCACCTGCAAGTTCCAAGAA GAAAACTGCTGTGGCAATTGATCCTGAGCTGTTAGAAGACGTTGAAGAATTTACTTTGAG AAATGATTTGATTGATTGTTATGTCGATATTTGCTCCCCGTTAGTTCCCGCCATATTTCA AGAGAACTTTGACTACCAATATTTAAGAAAGGATTTCGTGAAGGGTGTTCTTTCTAGTGA CTTGTTGAAAAAACACATCTATGCTTATATAACCGATGAATACGCTGCCAGAGCTGAAAG CTGGCAAACCTATGATGCAATTTCTCAAGATTTTCTAGCGAGATGGTGCTATCCACTGGT ATTGAATTCTAATCTACTAGAAGACCAGTCATATTCATATGAATCTCAACATATTTACAA AGAAAAGGACGTTGTTCTGGCACAATCGTGTAAAATTGGAAAATGCACTGCTATCGGCTC TGGTTCAAAAATCGGTGAAGGTACCAATATTGAAAACTCCGTCATTGGTAGAAATTGTCA AATTGGTGAGAACATTACTATCCGAAACAGCTATGTGTGGGATAACGCTGTGATAATGGA TGATTCTATTTTAAAGCATTCCATAGTTGCTTCTAATACTAGAATCGGCAAAAATGTGAC GCTTAATGACGGTTGTATCATTGGGTTCAATGTTGTAATTGATGATAATAAAATCATTCC GGAAGGCTGCAAAATATCCGGAACTCCAGTTGAAAAATCTTCTCAATTTTTAGATACTGA GTCTTACATTGACAGTAGCGATGATGAGGAGAACGAAGAAGGTATGGAAGAGGATGTTGC TCCAGCCAGGGATTTAGTTGGGGAGAATGGCATTGGCTACTTATACGAAAGTGAATACTC AGATGACGAAGATGATACCACAGATGGAGACCATGTTACCAATACACTAAGCTACAAACT GGATGAATTGTACTTAAGTGATACCTCGATTTCTTCTGCCACTACAAAACACAAAAAGAA AAGAACTATGTCAACCACAAGCTTGTATACTGATAAAGAGGATGATGACCTTGATGATGA AGAAGATTTTGAAAAAGAGGCTATTGCCACTGTCGCAAGGGCTATGGAGAATAACCACGA TCTTGATACTGCATTACTTGAACTAAACACTTTGAGAATGAGTATGAACGTGACATACCA CGAAGTAAGAACCTCCACTGTTATTGCTATGTTAAGAAGAGTCTACCATTTTATTGCCAC ACAAACCTTGGGCCCCAAAGATGCTGTTACAAAGGTTTTTGCCCAATGGGGATTGCTATT CAAGAGACAAGCTTTTGATCAAGAGGAATCTGTCGATTTAGTGAATATCATAATGGAAGG GGTTGTTGAAGAAAATTTCGAAAAGCCAGACTTCATTCTGTTTAGCGCCCTAAACTGCCT GTACGACATGGATATCTTAGACGAAGATGTGATCTACCAGTGGTGGGATACAGTTTCTAA GGATATCAAATATGAAGAAGTCAAGAAATTGACAGAAAAGTGGGTGGAGTGGCTAAAGAA CGCCGACGAAGAATCTTCCGAAGAAGAGGGCAACAGCGAAGAAGAGGAGTCTGGTGAAGA GTAAAATGTATACTACTAGTCATTTTTTAATAGTATCTTCAATGTTAAATTGCAGAAAGT CACGTGATAATTATTACCCTGACTTTTTAAAGCCACCGAATGCTGAAAATTTTTTGAATT CAACGCAACCAAACCTCAAATGGGGAAGTCCTTATCAGGGAGAAACTTTTTGAAAACAAC AGGAATTTAAAGAATCAATAAAAAAGAAAAACAACAATGCAAACGCTTAAGTGTGTTGTA GTCGGTGATGGTGCTGTCGGTAAAACATGTCTTCTAATTTCCTACACTACCAACCAATTT CCAG
>SAKL0H13090g.cds ATGGCGGGAAAAAAGAACAAGTCACACAATAACGGCTCTAAGCATGGCAAAAAGACCGAA CTTGTTCAAGATGAGCGTCTACAGGCTATTGTCCTTACTGATTCTTTCGAAACAAGGTTT ATGCCATTGACCTCTGTTAAGCCGAGGTGCCTATTACCATTAGCCAATGTCCCATTGATT GAGTACACTCTGGAATTTTTGGCCAAGGCCGGTGTAAATGAAGTTTATCTGATTTGTGCT TCACATGCTGAACAGGTTAATGAGTACATTGAAAACTCCAAATGGAACTTGCCGTGGTCT CCTTTCAAAGTCTCTACAATCATGTCTCTGGAGTCAAGATCTGTCGGTGATGCAATGAGA GATTTGGATAACAGAGGTTTAATTACAGGTGATTTCATCCTAGTGAGTGGTGACTTGGTT ACTAACATGGAATTTGACAAAGCATTGGAGGCCCACAGAAAGCAACGCGCAACAGACAAA GATCATATTGTAACGATGTGCTTGAGCAAAGCCAGCCAATATCATAGAACCAGATCCTAC GAACCCTCGACCTTTATTTTTGATAAATCAAATAACAGATGTTTATACTATCAAGAGATT CCACCTGCAAGTTCCAAGAAGAAAACTGCTGTGGCAATTGATCCTGAGCTGTTAGAAGAC GTTGAAGAATTTACTTTGAGAAATGATTTGATTGATTGTTATGTCGATATTTGCTCCCCG TTAGTTCCCGCCATATTTCAAGAGAACTTTGACTACCAATATTTAAGAAAGGATTTCGTG AAGGGTGTTCTTTCTAGTGACTTGTTGAAAAAACACATCTATGCTTATATAACCGATGAA TACGCTGCCAGAGCTGAAAGCTGGCAAACCTATGATGCAATTTCTCAAGATTTTCTAGCG AGATGGTGCTATCCACTGGTATTGAATTCTAATCTACTAGAAGACCAGTCATATTCATAT GAATCTCAACATATTTACAAAGAAAAGGACGTTGTTCTGGCACAATCGTGTAAAATTGGA AAATGCACTGCTATCGGCTCTGGTTCAAAAATCGGTGAAGGTACCAATATTGAAAACTCC GTCATTGGTAGAAATTGTCAAATTGGTGAGAACATTACTATCCGAAACAGCTATGTGTGG GATAACGCTGTGATAATGGATGATTCTATTTTAAAGCATTCCATAGTTGCTTCTAATACT AGAATCGGCAAAAATGTGACGCTTAATGACGGTTGTATCATTGGGTTCAATGTTGTAATT GATGATAATAAAATCATTCCGGAAGGCTGCAAAATATCCGGAACTCCAGTTGAAAAATCT TCTCAATTTTTAGATACTGAGTCTTACATTGACAGTAGCGATGATGAGGAGAACGAAGAA GGTATGGAAGAGGATGTTGCTCCAGCCAGGGATTTAGTTGGGGAGAATGGCATTGGCTAC TTATACGAAAGTGAATACTCAGATGACGAAGATGATACCACAGATGGAGACCATGTTACC AATACACTAAGCTACAAACTGGATGAATTGTACTTAAGTGATACCTCGATTTCTTCTGCC ACTACAAAACACAAAAAGAAAAGAACTATGTCAACCACAAGCTTGTATACTGATAAAGAG GATGATGACCTTGATGATGAAGAAGATTTTGAAAAAGAGGCTATTGCCACTGTCGCAAGG GCTATGGAGAATAACCACGATCTTGATACTGCATTACTTGAACTAAACACTTTGAGAATG AGTATGAACGTGACATACCACGAAGTAAGAACCTCCACTGTTATTGCTATGTTAAGAAGA GTCTACCATTTTATTGCCACACAAACCTTGGGCCCCAAAGATGCTGTTACAAAGGTTTTT GCCCAATGGGGATTGCTATTCAAGAGACAAGCTTTTGATCAAGAGGAATCTGTCGATTTA GTGAATATCATAATGGAAGGGGTTGTTGAAGAAAATTTCGAAAAGCCAGACTTCATTCTG TTTAGCGCCCTAAACTGCCTGTACGACATGGATATCTTAGACGAAGATGTGATCTACCAG TGGTGGGATACAGTTTCTAAGGATATCAAATATGAAGAAGTCAAGAAATTGACAGAAAAG TGGGTGGAGTGGCTAAAGAACGCCGACGAAGAATCTTCCGAAGAAGAGGGCAACAGCGAA GAAGAGGAGTCTGGTGAAGAGTAA
>SAKL0H13090g.aa MAGKKNKSHNNGSKHGKKTELVQDERLQAIVLTDSFETRFMPLTSVKPRCLLPLANVPLI EYTLEFLAKAGVNEVYLICASHAEQVNEYIENSKWNLPWSPFKVSTIMSLESRSVGDAMR DLDNRGLITGDFILVSGDLVTNMEFDKALEAHRKQRATDKDHIVTMCLSKASQYHRTRSY EPSTFIFDKSNNRCLYYQEIPPASSKKKTAVAIDPELLEDVEEFTLRNDLIDCYVDICSP LVPAIFQENFDYQYLRKDFVKGVLSSDLLKKHIYAYITDEYAARAESWQTYDAISQDFLA RWCYPLVLNSNLLEDQSYSYESQHIYKEKDVVLAQSCKIGKCTAIGSGSKIGEGTNIENS VIGRNCQIGENITIRNSYVWDNAVIMDDSILKHSIVASNTRIGKNVTLNDGCIIGFNVVI DDNKIIPEGCKISGTPVEKSSQFLDTESYIDSSDDEENEEGMEEDVAPARDLVGENGIGY LYESEYSDDEDDTTDGDHVTNTLSYKLDELYLSDTSISSATTKHKKKRTMSTTSLYTDKE DDDLDDEEDFEKEAIATVARAMENNHDLDTALLELNTLRMSMNVTYHEVRTSTVIAMLRR VYHFIATQTLGPKDAVTKVFAQWGLLFKRQAFDQEESVDLVNIIMEGVVEENFEKPDFIL FSALNCLYDMDILDEDVIYQWWDTVSKDIKYEEVKKLTEKWVEWLKNADEESSEEEGNSE EEESGEE*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0H13090p