HomeSAKL0H03454g
highly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055C PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis
Element type: CDS
Element length: 1092 nucleotides,
on anti-sense strand of
Sakl0H: complement(330289..331380).
Other names:
SAKL-ORF2267
Coding sequence: 364 codons.
Element length: 1092 nucleotides,
on anti-sense strand of
Sakl0H: complement(330289..331380).
Other names:
SAKL-ORF2267
Coding sequence: 364 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0213 GL3C0213.F2 GL3C0213.N1Orthologs by synteny: ZYRO0B07150g KLTH0D13948g KLLA0E05435g ERGO0F19822g
Protein SAKL0H03454p 
highly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055C PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) synthesizes GDP- mannose from GTP and mannose-1-phosphate in cell wall biosynthesis required for normal cell wall structure
Protein domain map
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>SAKL0H03454g.nt GCAGCAGGTACGGTACCAACTGGAGAGCTGTGCTTGCATACGTTATCGGCATTGTTCCAA ATTTCCCTGGATTTATTGGTTCGGTGGGGCCTACGGTTCCCGAGGGTGCTATGAGAGTCT ATTACTTGAATTACTTTGTCGGCTATCTAATTTCATTCTTGACTTACTCTACACTGTGCT ACTTCTGGCCAGTAGGGGGGATGCCAGAAGGTGTTGGATACTTTGACTTCTCGAAATGGT TTGAGAAATGGGTCGAAGTGGAAGATTTTGCAGAAAAGAGAAAGTTATTTGAAAAATACG GAGATCTGGCAGTTGACGAAGAGGAGACTAGTGGCAGTACCACTTCACGTGAAAGCATCA GAAACTTGGAAAAGGTTTGACATTCGCTCTCGTGTCCTTCTTACTCTCCTGTATTCCCTT GTAGCTACGCTCAACATTTACATAAACTTCTAATTATATAATCAATGTCTCTCAATACTG GTCCTTTCATGTTATCGTGTCGTCCAAATACTAACATCACGTGCACACAGCCACGTGCTT GTCATTAATCATCACTATAGACGCGCCAAGCAGCAGCACACATACACTAATCACGTGACT AATGCTGTCTCGAACTAGTTTTAGGTGGCGTTCTAGACCTGGCTCCCCCTGTCGCGTAGG TTAGCGCTGCGGCGCATTCTTCTAATTTGGCAACGCGTCGACCAGCGCCTGCTGCTAAGA AAACACCGCACAGATTTTACGCGGTAACGATAGATAAACACCAGCCTAACAAAAAGAAAA CAAAAAAAACTTTCACACGCAGCGTAAAAAAAAAGGCGTCGTCGACGTGTCCAAAATTTT TCCTTTTATTTCGTTACAACTGCCACATATAAGTACAAGAGGTTTTTTTTTTAGAAAAAG TGTTCCTAGTGAACTTTTTCCTTCTTCTTGTTATTCTTGTTCTTAACTCTTTGACTTTGA ATTAGTCTAAGCACATTACAAACTTCTCTCTATATACACAATGAAAGGTTTGATTTTAGT CGGTGGTTACGGTACCAGATTGAGACCTCTAACTTTAACTGTTCCAAAGCCATTGGTCGA ATTTGGTAACAGACCAATGATTCTGCACCAAATTGAAGCTTTGGCCGCTGCTGGTGTCAC TGACATTGTTTTGGCTGTTAACTATAGACCAGAAGTTATGGTTGAAACTTTGAAAAAGTA CGAAGATGAATACGGCGTTTCCATCACTTTTTCTGTTGAAACTGAACCATTGGGTACTGC TGGTCCTTTGAAGTTGGCTGAAAAGGTCTTAAAGAAAGACAACTCTCCATTCTTCGTTCT AAACTCTGACGTTATCTGTGACTATCCATTCAAGGAATTGGCTGAATTCCACAGCGCTCA CGGTGGCCAAGGTACTATCGTTGCTACTAAGGTTGATGAACCATCCAAGTACGGTGTCAT TGTCCACGACATTGCTACTCCAAACTTGATCGACAGATTTGTTGAAAAACCAGTCGAATT CGTTGGTAACAGAATCAACGCTGGTTTGTACATCTTGAATCCAGAGGTCATCGACTTGAT TGACCTGAAACCAACTTCTATTGAAAAGGAAACTTTCCCAATTTTGGTTGAGCAAAAATC CTTGTACTCCTTCGACTTGGAAGGTTACTGGATGGATGTCGGTCAACCAAAGGATTTCTT GTCTGGTACCGTTCTATACCTAAACTCTTTGTCCAGAAGAGCTCCAGAGAAATTGGCCAA GCAATCCGAAGGTCACATTGTCGGTAACGTTCTCATTGACCCATCTGCCAAGATTGCTCC AACTGCCAAGATTGGCCCTGATGTTGTCGTCGGTCCAAACGTCACCATCGGTGACGGTGT CAGAATCACCAGATCCGTTGTTTTGTCCGACTCTAACATCAAGGACCACGCTTTGGTCAA ATCTACCATTGTAGGCTGGAACTCTACCGTTGGTAAATGGGCTCGTTTGGAAGGTGTCAC CGTTTTGGGTGATGACGTTGAAGTTAAAGACGAAGTCTACGTCAACGGTGGTAAGGTCTT GCCTCACAAGTCTATCTCTGCCAATGTTCCAAAGGAAGCTATTATCATGTAAGGTTGATC CTTCTGCAAAAGAGAAGCTTTTTTCCCCTTTATATATTTCTCCTTTTCCCTATGTAATGA CTTTCGCCGGGTGCAATTAAAGATTTTAAAATAGAGTAATTAGCTTAAATACCCTCTCTA CTAAAGAGATAATAAGATTAAAAAAATAATAAAAAAAAAAAACGAAAAAAAACCCAACAA AAACGTCCGTATAGAAAAGATCAAAATAGTACTAATAGTTAGTATTCATTACTTAAGGCT TTTTCACTCATTAGCTAAGCTTTGTAAAATGACACCCAAACATCCATCCACT
Coding sequence
>SAKL0H03454g.cds ATGAAAGGTTTGATTTTAGTCGGTGGTTACGGTACCAGATTGAGACCTCTAACTTTAACT GTTCCAAAGCCATTGGTCGAATTTGGTAACAGACCAATGATTCTGCACCAAATTGAAGCT TTGGCCGCTGCTGGTGTCACTGACATTGTTTTGGCTGTTAACTATAGACCAGAAGTTATG GTTGAAACTTTGAAAAAGTACGAAGATGAATACGGCGTTTCCATCACTTTTTCTGTTGAA ACTGAACCATTGGGTACTGCTGGTCCTTTGAAGTTGGCTGAAAAGGTCTTAAAGAAAGAC AACTCTCCATTCTTCGTTCTAAACTCTGACGTTATCTGTGACTATCCATTCAAGGAATTG GCTGAATTCCACAGCGCTCACGGTGGCCAAGGTACTATCGTTGCTACTAAGGTTGATGAA CCATCCAAGTACGGTGTCATTGTCCACGACATTGCTACTCCAAACTTGATCGACAGATTT GTTGAAAAACCAGTCGAATTCGTTGGTAACAGAATCAACGCTGGTTTGTACATCTTGAAT CCAGAGGTCATCGACTTGATTGACCTGAAACCAACTTCTATTGAAAAGGAAACTTTCCCA ATTTTGGTTGAGCAAAAATCCTTGTACTCCTTCGACTTGGAAGGTTACTGGATGGATGTC GGTCAACCAAAGGATTTCTTGTCTGGTACCGTTCTATACCTAAACTCTTTGTCCAGAAGA GCTCCAGAGAAATTGGCCAAGCAATCCGAAGGTCACATTGTCGGTAACGTTCTCATTGAC CCATCTGCCAAGATTGCTCCAACTGCCAAGATTGGCCCTGATGTTGTCGTCGGTCCAAAC GTCACCATCGGTGACGGTGTCAGAATCACCAGATCCGTTGTTTTGTCCGACTCTAACATC AAGGACCACGCTTTGGTCAAATCTACCATTGTAGGCTGGAACTCTACCGTTGGTAAATGG GCTCGTTTGGAAGGTGTCACCGTTTTGGGTGATGACGTTGAAGTTAAAGACGAAGTCTAC GTCAACGGTGGTAAGGTCTTGCCTCACAAGTCTATCTCTGCCAATGTTCCAAAGGAAGCT ATTATCATGTAA
Predicted translation product
>SAKL0H03454g.aa MKGLILVGGYGTRLRPLTLTVPKPLVEFGNRPMILHQIEALAAAGVTDIVLAVNYRPEVM VETLKKYEDEYGVSITFSVETEPLGTAGPLKLAEKVLKKDNSPFFVLNSDVICDYPFKEL AEFHSAHGGQGTIVATKVDEPSKYGVIVHDIATPNLIDRFVEKPVEFVGNRINAGLYILN PEVIDLIDLKPTSIEKETFPILVEQKSLYSFDLEGYWMDVGQPKDFLSGTVLYLNSLSRR APEKLAKQSEGHIVGNVLIDPSAKIAPTAKIGPDVVVGPNVTIGDGVRITRSVVLSDSNI KDHALVKSTIVGWNSTVGKWARLEGVTVLGDDVEVKDEVYVNGGKVLPHKSISANVPKEA IIM*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0H03454p