HomeSAKL0H00968g
highly similar to uniprot|P40416 Saccharomyces cerevisiae YMR301C ATM1 Mitochondrial inner membrane ATP- binding cassette (ABC) transporter, exports mitochondrially synthesized precursors of iron-sulfur (Fe/S) clusters to the cytosol
Element type: CDS
Element length: 2103 nucleotides,
on sense strand of
Sakl0H: 107767..109869.
Other names:
SAKL-ORF2500
Coding sequence: 701 codons.
Element length: 2103 nucleotides,
on sense strand of
Sakl0H: 107767..109869.
Other names:
SAKL-ORF2500
Coding sequence: 701 codons.
Homologs and Orthologs
Homologs in protein family: GL3C0060Orthologs: strict determination not possible; homologs must be refined manually
Protein SAKL0H00968p 
Protein domain map
Computed results for SAKL0H00968p
None available yet
Gene Ontology terms
None available yet
Sequence data
>SAKL0H00968g.nt ATGTTGAGAACCAATCCTTGTTTCCGATTATCTAGACTATGCAAGTCATTTGTTCCTAAT TCTCAATTATCTTTGAGAAAGCCGTTGACTAACTGTGCTTCCTTGCATTGCCGGTTCTCC ACTCAAAGACCTCTATGGTTACACAATTCCTCGGCACAGTGGAAAGATGCACTAAAGTCC TTCAATACTCCAAAAATTGGTAAAAGGGACGCCAACCCAGTACCCAGAATTGAAGCTCCA AAGACCAAGGTTACTAGTAAATCTAAAGCACCAACAATCTCTGAGTTAAAAATTTTGAAA GATTTGTTCAAGTACATTTGGCCGAGTGGAGACAACAAGGTGAGATTTCGAGTCTTAACT GCTCTAGCCCTATTGATTGGTGCAAAATTATTGAACGTTCAAGTACCCTTCTTTTTTAAA GATGCTGTGGATTCGATGAATATAGAATGGTCAGATGCTACCACAGTGTTACCAATAGCC ATTACTTTGACCGTTCTATCTTACGGTGCTGCTAGGTTCGGTGCTGTTCTTTTTGGAGAA ATAAGAAATGCTGTATTTGCTTCAGTGGCACAAAATGCCATCCGAAAAGTCTCTTTACAA ACTTTCCAACATCTGATGCGCTTGGATTTAGGTTGGCATCTGAGTAGGCAGACTGGTGGA CTAACTAGGGCTATGGACAGAGGTACTAAGGGGATTTCTTATGTTTTGTCAGCTATGGTA TTTCACATCATCCCGATTGCTTTTGAAATATCTGTAGTTTGTGGGATTTTAACTTATCAG TTTGGCACTTCCTTTGCTGCAGTAACATTTGCCACGATGCTATTGTATTCGATTTTTACT TTTAAAACAACCGCATGGAGAACTGAATTTAGGCGTTCTGCAAACCGAGCTGACAACAAG GCTGCGAGCGTGGCTTTGGACTCTTTGATCAATTTCGAAGCGGTAAAATACTTCAACAAC GAGCGATACTTGGCTGACAAATACCACAACTCGTTAACAAACTACACGAACTCCCAGATT AAGGTTGCCCAGTCATTGGCATTTTTAAATTCTGGCCAGAATTTGATCTTTACGTCGGCG CTAACAGCAATGATGTATATGGGTTGTACTGGTGTAATGTCCGGCGATTTGTCTGTTGGT GACTTGGTGCTAATTAATCAACTTGTTTTCCAACTATCTGTACCGTTAAACTTTTTAGGC AGTGTTTATCGTGAGTTGAAACAATCCTTGATCGACATGGAATCCTTGTTTAAACTGCAA AAAAATAAAGTAAACATCCAAAACAGTAAAACACCATTGATGCTTCCCAAAGACAAGCCC TGTGAAATTAAGTTTGAAAATGTTACATTTGGATATCATCCGGATAGAAAGATTTTGGAA AATGCCAACTTTACTCTACCGGCAGGTTGGAAAACTGCGATAGTTGGCCCGTCCGGGAGT GGTAAATCAACAATTTTAAAACTGGTATTTAGATTCTACGACCCTCAAGAGGGTCGCATC CTGATAGACGGCAAAGATATCCGTGAATTAGATCTGAAATCACTAAGACGTGCTATTGGT GTCGTCCCCCAAGATACCCCACTTTTCAATGATACCATCTGGGAAAATGTCAAGTTTGGT AAGATCACTGCTACAGATGATGATATTAGGAAAGCAATTGATAAGGCTCAACTAGCTCCA TTAATACATTCTTTGCCTCAGGGTTCTGAGACAATTGTCGGTGAAAGAGGGTTGATGATC AGTGGTGGTGAAAAGCAAAGGTTGGCAATCGCTCGTGTTTTACTAAAAGATACTCCTATA ATGTTTTTCGACGAAGCTACAAGCGCTTTGGATACTCATACCGAGCAGGCGTTATTGAGA ACGATTAAGGAAAACTTTGCCGGTAATAGCAGGACTAGTATATACATTGCACACAGGTTA AGAACCATTGCAGACGCAGATAAAATTGTCGTCCTAGAAAATGGTAGAGTGAAAGAAGAA GGTAAACACGCCGAGTTACTATCAAAGCCCACCTCCTTGTACAGCGAGCTATGGAATATT CAAGAAAACTTAGACCTGTTGGAGGAAGAAATCGAAATGGACAAAAAGCAACAAGACACA TAA
>SAKL0H00968g.cds ATGTTGAGAACCAATCCTTGTTTCCGATTATCTAGACTATGCAAGTCATTTGTTCCTAAT TCTCAATTATCTTTGAGAAAGCCGTTGACTAACTGTGCTTCCTTGCATTGCCGGTTCTCC ACTCAAAGACCTCTATGGTTACACAATTCCTCGGCACAGTGGAAAGATGCACTAAAGTCC TTCAATACTCCAAAAATTGGTAAAAGGGACGCCAACCCAGTACCCAGAATTGAAGCTCCA AAGACCAAGGTTACTAGTAAATCTAAAGCACCAACAATCTCTGAGTTAAAAATTTTGAAA GATTTGTTCAAGTACATTTGGCCGAGTGGAGACAACAAGGTGAGATTTCGAGTCTTAACT GCTCTAGCCCTATTGATTGGTGCAAAATTATTGAACGTTCAAGTACCCTTCTTTTTTAAA GATGCTGTGGATTCGATGAATATAGAATGGTCAGATGCTACCACAGTGTTACCAATAGCC ATTACTTTGACCGTTCTATCTTACGGTGCTGCTAGGTTCGGTGCTGTTCTTTTTGGAGAA ATAAGAAATGCTGTATTTGCTTCAGTGGCACAAAATGCCATCCGAAAAGTCTCTTTACAA ACTTTCCAACATCTGATGCGCTTGGATTTAGGTTGGCATCTGAGTAGGCAGACTGGTGGA CTAACTAGGGCTATGGACAGAGGTACTAAGGGGATTTCTTATGTTTTGTCAGCTATGGTA TTTCACATCATCCCGATTGCTTTTGAAATATCTGTAGTTTGTGGGATTTTAACTTATCAG TTTGGCACTTCCTTTGCTGCAGTAACATTTGCCACGATGCTATTGTATTCGATTTTTACT TTTAAAACAACCGCATGGAGAACTGAATTTAGGCGTTCTGCAAACCGAGCTGACAACAAG GCTGCGAGCGTGGCTTTGGACTCTTTGATCAATTTCGAAGCGGTAAAATACTTCAACAAC GAGCGATACTTGGCTGACAAATACCACAACTCGTTAACAAACTACACGAACTCCCAGATT AAGGTTGCCCAGTCATTGGCATTTTTAAATTCTGGCCAGAATTTGATCTTTACGTCGGCG CTAACAGCAATGATGTATATGGGTTGTACTGGTGTAATGTCCGGCGATTTGTCTGTTGGT GACTTGGTGCTAATTAATCAACTTGTTTTCCAACTATCTGTACCGTTAAACTTTTTAGGC AGTGTTTATCGTGAGTTGAAACAATCCTTGATCGACATGGAATCCTTGTTTAAACTGCAA AAAAATAAAGTAAACATCCAAAACAGTAAAACACCATTGATGCTTCCCAAAGACAAGCCC TGTGAAATTAAGTTTGAAAATGTTACATTTGGATATCATCCGGATAGAAAGATTTTGGAA AATGCCAACTTTACTCTACCGGCAGGTTGGAAAACTGCGATAGTTGGCCCGTCCGGGAGT GGTAAATCAACAATTTTAAAACTGGTATTTAGATTCTACGACCCTCAAGAGGGTCGCATC CTGATAGACGGCAAAGATATCCGTGAATTAGATCTGAAATCACTAAGACGTGCTATTGGT GTCGTCCCCCAAGATACCCCACTTTTCAATGATACCATCTGGGAAAATGTCAAGTTTGGT AAGATCACTGCTACAGATGATGATATTAGGAAAGCAATTGATAAGGCTCAACTAGCTCCA TTAATACATTCTTTGCCTCAGGGTTCTGAGACAATTGTCGGTGAAAGAGGGTTGATGATC AGTGGTGGTGAAAAGCAAAGGTTGGCAATCGCTCGTGTTTTACTAAAAGATACTCCTATA ATGTTTTTCGACGAAGCTACAAGCGCTTTGGATACTCATACCGAGCAGGCGTTATTGAGA ACGATTAAGGAAAACTTTGCCGGTAATAGCAGGACTAGTATATACATTGCACACAGGTTA AGAACCATTGCAGACGCAGATAAAATTGTCGTCCTAGAAAATGGTAGAGTGAAAGAAGAA GGTAAACACGCCGAGTTACTATCAAAGCCCACCTCCTTGTACAGCGAGCTATGGAATATT CAAGAAAACTTAGACCTGTTGGAGGAAGAAATCGAAATGGACAAAAAGCAACAAGACACA TAA
>SAKL0H00968g.aa MLRTNPCFRLSRLCKSFVPNSQLSLRKPLTNCASLHCRFSTQRPLWLHNSSAQWKDALKS FNTPKIGKRDANPVPRIEAPKTKVTSKSKAPTISELKILKDLFKYIWPSGDNKVRFRVLT ALALLIGAKLLNVQVPFFFKDAVDSMNIEWSDATTVLPIAITLTVLSYGAARFGAVLFGE IRNAVFASVAQNAIRKVSLQTFQHLMRLDLGWHLSRQTGGLTRAMDRGTKGISYVLSAMV FHIIPIAFEISVVCGILTYQFGTSFAAVTFATMLLYSIFTFKTTAWRTEFRRSANRADNK AASVALDSLINFEAVKYFNNERYLADKYHNSLTNYTNSQIKVAQSLAFLNSGQNLIFTSA LTAMMYMGCTGVMSGDLSVGDLVLINQLVFQLSVPLNFLGSVYRELKQSLIDMESLFKLQ KNKVNIQNSKTPLMLPKDKPCEIKFENVTFGYHPDRKILENANFTLPAGWKTAIVGPSGS GKSTILKLVFRFYDPQEGRILIDGKDIRELDLKSLRRAIGVVPQDTPLFNDTIWENVKFG KITATDDDIRKAIDKAQLAPLIHSLPQGSETIVGERGLMISGGEKQRLAIARVLLKDTPI MFFDEATSALDTHTEQALLRTIKENFAGNSRTSIYIAHRLRTIADADKIVVLENGRVKEE GKHAELLSKPTSLYSELWNIQENLDLLEEEIEMDKKQQDT*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://192.168.122.177/elt/SAKL/SAKL0H00968g