HomeSAKL0H00550g
similar to uniprot|P22146 Saccharomyces cerevisiae YMR307W GAS1 Beta-1,3-glucanosyltransferase, required for cell wall assembly
Element type: CDS
Element length: 1656 nucleotides,
on sense strand of
Sakl0H: 67033..68688.
Other names:
SAKL-ORF2540
Coding sequence: 552 codons.
Element length: 1656 nucleotides,
on sense strand of
Sakl0H: 67033..68688.
Other names:
SAKL-ORF2540
Coding sequence: 552 codons.
Homologs and Orthologs
Homologs in protein families: GL3R0042 GL3R0042.F1 GL3R0042.N2Orthologs: strict determination not possible; homologs must be refined manually
Protein SAKL0H00550p 
similar to uniprot|P22146 Saccharomyces cerevisiae YMR307W GAS1 Beta-1.3-glucanosyltransferase required for cell wall assembly localizes to the cell surface via a glycosylphosphatidylinositol (GPI) anchor
Protein domain map
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>SAKL0H00550g.nt TATCTTTTGTTTTGAACTTGTACTATCAAGAGAATAACCAAAGGGATTCTGCTTGCTCTT TCAGTGGCTCCGCTTCTTTGCAAAGTGCTACCACCCAAAGTGGCTGCTCTGCTGCATTGA ATCAAATTGGTACCTTAGGTACTGGTTCCGCCAGCGCTACAGCTACTTTCACCGGTGGTA GCTCCACCACCGCATCCAACTCTGGTAAGACCAACACTGCTAGTGGTGTGTCTACTTCTG GTTCTAAGTCCACGGGTAGCTCTTCTGGCTCTTCCACCTCATCCTCTTCTTCCTCATCTT CTTCTTCCACCGAAAAAAGCAACTCGGGTGCTCCTGCCAACGTCAAATTGAACTTTGCTC AAGTACTAGCCACCTCTCTGGTTTCCATTTCCGTCGTAGCTGGCTTAGGTTTTGTTATGG CTTGAAATCATAGATATGACAGCCATTTGTCTTACACAGGAAGAAAAGTTTGTTCTTTTT TTATCATTATTTTGATGTATAAACTTGTATAAGTCCTCTATAACTAAAGGAGAAAAGTTT AAATAGGTATGCTGTTTAAATTTGTCGAGTCAACCACACTTTACCATCAAAGCGTTGACA TTCGAGATGTTGAAATATTCTCGGTCGTCGGCTTCTATTTAAAAAGTCCAAGGCGCCGCC AGTTGAAAAAAAAGACGTTTTTGTGGTCTGGAACGGAAGAGAAGGGAACGAAAATACAAT CAAGCTGAATTTCCTAATGCCGCAAGTGATACCCGAATGGCGCAGTGCACGTATTAATGA TGTGTTTCTTTTTAAGGCAAAATACTGGTTCTTTTCGAGAGGTTTGTCGATTGCATGACT AGGACATTCCTTTTTCGTGTTTTGTTGTGCCAACAATGAAATTTCCAGATCGGACGTGTA TTTGGGGTATATAAGTAGACAGCTTGCTCTTGCCAAAAATGGCTTACAGGTCCTTCCCTC ACTCGTACAAGATTTTTATTTTACAACTACGACACTCGCTATGACCAGTTGTTTAAATCT TTTGATTTTGTTATTTGCCCACGTCCTGACGTTTGCTACTGCCGCAGACAGTGACAAGGA CTCCAGTACCCCGGCTATAGAAATTGTCGGAAACAAGTTCTTTTACTCAAACAACGGTTC CCAATTTTACATGAAGGGTATTGCATACCAGGCTGATACCGCAAACTCCACTTCTGGCGA AACTATCAATGACCCGCTAGCTAATTACGAGACTTGTAAGAGGGATTTGCCATACTTGCT GGATTTACAAACTAACACTATCAGAATATACGCTGTTAATACTTCTTTAGACCATACCGA TTGTTTGAAGCTGTTACAAGACAACCATATTTATGTTATTGCCGACTTATCTGAGCCAGC TGACTCTGTTAATAGAGAGTCACCAGCTTGGACTGTACAGCTATATGAGCGTTACACTTC AGTCGTTGATGTCTTGCAAAACTATACAAACGTTTTAGGTTTTTTTGCTGGTAACGAAGT CACTAACAATGCTTCTAACACTGATGCATCTGCGTTCGTTAAGGCCGCTTTGAGAGACAC CAAGAAGTACATCAAGGATAAAGGGTACAGACAGATCCCAGTTGGTTACTCTTCCAACGA TGATGAGGATACTAGAGTCGCTATTGCCGACTACTTTGCCTGTGGTGATGAAGATGAAAA GGCTGACTTCTACGGTATTAACATGTACGAATGGTGTGGTGAATCTACTTTCCAAAAATC CGGTTTTTCTGACAGAACCAAAGAATTTTCTAACCTAACTATCCCAGTTTTCTTTTCCGA ATACGGTTGTAATGAGGTTCAGCCAAGAAAGTTCCAGGAAGTCAGCGCTTTGTACAGTGA TGATATGACTGATGTCTGGTCTGGTGGTATTGTTTACATGTACTTTGAAGAATCCAACAA CTACGGTTTGGTCTCTATTGATAATGGTAAAGTCAAAACTCTAGATGACTACAACAATTT GAAGAGTGAGTTGGCCTCAGTTTCTCCAACCTCTGCTAAATCTGCCTCTTACACCCCTAG CTCTACATCTCTAGCCTGTCCGGCTACTGGTGCCTATTGGAGTGCTGCTACCAATCTGCC ACCAACTCCAGATAAAGATACTTGTGACTGTATTAAAAACTCTTTGGCATGTGTCGTTGA TAGCGATGTTGAAGAAGAAAACTATCATGAGCTATTTGACTACCTTTGCTCTGAAATTGA TTGTGGTGATATCTCTGCCAACGGTACATCAGGCGAATATGGCCCGTACTCCTTCTGTGA TGCTAGTGTAAAGTTGTCTTACTTGTTGAACAAGTACTACGAATCTCAAGACAAAAAGGA CTCCGCTTGTTCCTTCAGTGGTTCTGCATCATTGGCTTCCTCCACCAGCCTGCCATCATC ATGCAGTGCAGTCTTGTCTTCTGCTTCAGCATCTGCTACAGTTACAGGCTCTTCTGGTAG TTCTGGCTCTTCTGGATCAACTTCTAAATCATCTGGTTCTTCCGGTAACTCCACATCCTC CTCCTCCAGCTCCTCTTCTTCCACTAAGGAATCCGCTGCTGGTATCAGCGCTAGGCCTAA AGCTGTGTCTGAGATTATTTTAGGTACTGCTGTTGTTACTTTCTTCTTGGCTGGTTTTGG TCTGGTGATGTTGTAAGTGGCCATATGTCCTTCCGAAGGTTTTATGGAAGCGAAAAAGTG ATTGTATATTCCGTTTTCTTTTAATGTTTATAGGCTTTCAAGGAATAATTGTATCTCTTT ATGTTAACATGCAGTCTATATAGTGTACAAATCTGTTCACACGGTTTTTTGTGAGTTAAT TGGTAACCATGAATATTTCGTTTAGTGCCTTGGCATCCATCACAGCGGCACGCTTTTGCT TGATCCATTTGGAACGAACAGAGAGCCTTGTTGATAATGTATCTGGAACGATGGCAGCGG AATCTCTTGGTTTCAA
Coding sequence
>SAKL0H00550g.cds ATGACCAGTTGTTTAAATCTTTTGATTTTGTTATTTGCCCACGTCCTGACGTTTGCTACT GCCGCAGACAGTGACAAGGACTCCAGTACCCCGGCTATAGAAATTGTCGGAAACAAGTTC TTTTACTCAAACAACGGTTCCCAATTTTACATGAAGGGTATTGCATACCAGGCTGATACC GCAAACTCCACTTCTGGCGAAACTATCAATGACCCGCTAGCTAATTACGAGACTTGTAAG AGGGATTTGCCATACTTGCTGGATTTACAAACTAACACTATCAGAATATACGCTGTTAAT ACTTCTTTAGACCATACCGATTGTTTGAAGCTGTTACAAGACAACCATATTTATGTTATT GCCGACTTATCTGAGCCAGCTGACTCTGTTAATAGAGAGTCACCAGCTTGGACTGTACAG CTATATGAGCGTTACACTTCAGTCGTTGATGTCTTGCAAAACTATACAAACGTTTTAGGT TTTTTTGCTGGTAACGAAGTCACTAACAATGCTTCTAACACTGATGCATCTGCGTTCGTT AAGGCCGCTTTGAGAGACACCAAGAAGTACATCAAGGATAAAGGGTACAGACAGATCCCA GTTGGTTACTCTTCCAACGATGATGAGGATACTAGAGTCGCTATTGCCGACTACTTTGCC TGTGGTGATGAAGATGAAAAGGCTGACTTCTACGGTATTAACATGTACGAATGGTGTGGT GAATCTACTTTCCAAAAATCCGGTTTTTCTGACAGAACCAAAGAATTTTCTAACCTAACT ATCCCAGTTTTCTTTTCCGAATACGGTTGTAATGAGGTTCAGCCAAGAAAGTTCCAGGAA GTCAGCGCTTTGTACAGTGATGATATGACTGATGTCTGGTCTGGTGGTATTGTTTACATG TACTTTGAAGAATCCAACAACTACGGTTTGGTCTCTATTGATAATGGTAAAGTCAAAACT CTAGATGACTACAACAATTTGAAGAGTGAGTTGGCCTCAGTTTCTCCAACCTCTGCTAAA TCTGCCTCTTACACCCCTAGCTCTACATCTCTAGCCTGTCCGGCTACTGGTGCCTATTGG AGTGCTGCTACCAATCTGCCACCAACTCCAGATAAAGATACTTGTGACTGTATTAAAAAC TCTTTGGCATGTGTCGTTGATAGCGATGTTGAAGAAGAAAACTATCATGAGCTATTTGAC TACCTTTGCTCTGAAATTGATTGTGGTGATATCTCTGCCAACGGTACATCAGGCGAATAT GGCCCGTACTCCTTCTGTGATGCTAGTGTAAAGTTGTCTTACTTGTTGAACAAGTACTAC GAATCTCAAGACAAAAAGGACTCCGCTTGTTCCTTCAGTGGTTCTGCATCATTGGCTTCC TCCACCAGCCTGCCATCATCATGCAGTGCAGTCTTGTCTTCTGCTTCAGCATCTGCTACA GTTACAGGCTCTTCTGGTAGTTCTGGCTCTTCTGGATCAACTTCTAAATCATCTGGTTCT TCCGGTAACTCCACATCCTCCTCCTCCAGCTCCTCTTCTTCCACTAAGGAATCCGCTGCT GGTATCAGCGCTAGGCCTAAAGCTGTGTCTGAGATTATTTTAGGTACTGCTGTTGTTACT TTCTTCTTGGCTGGTTTTGGTCTGGTGATGTTGTAA
Predicted translation product
>SAKL0H00550g.aa MTSCLNLLILLFAHVLTFATAADSDKDSSTPAIEIVGNKFFYSNNGSQFYMKGIAYQADT ANSTSGETINDPLANYETCKRDLPYLLDLQTNTIRIYAVNTSLDHTDCLKLLQDNHIYVI ADLSEPADSVNRESPAWTVQLYERYTSVVDVLQNYTNVLGFFAGNEVTNNASNTDASAFV KAALRDTKKYIKDKGYRQIPVGYSSNDDEDTRVAIADYFACGDEDEKADFYGINMYEWCG ESTFQKSGFSDRTKEFSNLTIPVFFSEYGCNEVQPRKFQEVSALYSDDMTDVWSGGIVYM YFEESNNYGLVSIDNGKVKTLDDYNNLKSELASVSPTSAKSASYTPSSTSLACPATGAYW SAATNLPPTPDKDTCDCIKNSLACVVDSDVEEENYHELFDYLCSEIDCGDISANGTSGEY GPYSFCDASVKLSYLLNKYYESQDKKDSACSFSGSASLASSTSLPSSCSAVLSSASASAT VTGSSGSSGSSGSTSKSSGSSGNSTSSSSSSSSSTKESAAGISARPKAVSEIILGTAVVT FFLAGFGLVML*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0H00550p