HomeSAKL0F05456g
similar to uniprot|Q08193 Saccharomyces cerevisiae YOL030W GAS5 1,3-beta-glucanosyltransferase, has similarity to Gas1p
Element type: CDS
Element length: 1458 nucleotides,
on anti-sense strand of
Sakl0F: complement(421709..423166).
Other names:
SAKL-ORF5831
Coding sequence: 486 codons.
Element length: 1458 nucleotides,
on anti-sense strand of
Sakl0F: complement(421709..423166).
Other names:
SAKL-ORF5831
Coding sequence: 486 codons.
Homologs and Orthologs
Homologs in protein families: GL3R0042 GL3R0042.F3 GL3R0042.N2Orthologs by synteny: ZYRO0G04268g KLTH0F12474g KLLA0D14421g ERGO0D08822g
Protein SAKL0F05456p 
similar to uniprot|Q08193 Saccharomyces cerevisiae YOL030W GAS5 Putative 1,3-beta-glucanosyltransferase has similarity to Gas1p localizes to the cell wall
Protein domain map
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>SAKL0F05456g.nt GGTTCGTGTATGGAGATGCTCGATTTTAACTCGTTTTGCGGAACCTGGAGAGAGTAAAAT TGGACTGGATTAACTCTAATCGCGCATGTCCGCCCATCACCTTTTCAATGGCTTCCTTAC GGTCAGAACCCTCTTCCTTTAAAGCATTTGTTGTTGAATCTTGATTATTGTTTAAGAGAA GAGCAAGCACAATGACCCGTCGTAAAACAACACGGTCACAATCCTTTTCCCTCTCTTTTT CCCTAATCGAAGCTTATTGGCACTTCCCGCCTCGGTATTTTAAAGTTTTCGAACAACGTG TTTAGGTAACGGATCCTTATTTCATGCGAGGCTTTTTTTAGCGATATAAGCGTCGATGTG TTGTGGTACGTCAAAGTTAGGTAAGGCGACGACTAACCCCTCTGGAAGTACTCAAAGGAT TCATACGCATTCAATAATAAAATATCTAAACTATCGTGATCTACGTTTACAAATTGCTTC ATGTTGATCACGTGCATGAAATTATTCGATGCATTATCACCTGGAAGAAGTGTCAAAGGT TGCTAGCTACCTCCTTATACCAGCGTATACAGATAGTGTCATTATTGATTAATTGTATTG CACGGTTCGTACTCCCTCCCTACATGGTTATTCGTCTCTGTCACTACGAAGAGGGTTGGA GGCAGAGAGGTCATACAGTTCATCGTGACGTAGAAGCTCTAAAACTTTTTGGTTTTCAAG CCAATTACACAAGGAAAGTGCCCGAGTTAATGAGATCCCGAGAGCTATGACTGCGATTCC TACCATAAGCTTGATTTTTACCTCGGCTATTTCCAGTTACAACTGCTGCAACTTCCTTTC TTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAAGAACCGTGCACCGCTAC CCTCGTGTTTACAGTTTTGGTGTATAAGTGAACAGATCTGAAACATTAAGCCTTTTCCCG TATTACTCAACACTTGCGAAGATCATAAAACAAAGCAGCTATGCACTTTCTATCGTTGAG TGTCAAGATTTTATCCCTAGTAGGTATGGCTACTGCTGCTACAACTACTTCAACGTCTAG TTCCAGTTCCAGTTCGAAAACATCGAGCGCTTCCTCTTTGCCGGTTATCAACATTACTGG TAATGCGTTTTTCAACTCTGAAAACGGGGAGAGATTCTACATTCGTGGTGTAGACTACCA ACCTGGTGGATCTTCAAACTTGACAGATCCATTGGCTGATGTTACAATCTGTAAGAGAGA CATTCCAGTATTTGAAGATTTGGGTATTAATACAATCAGAGTCTACACCGTGGACAACTC CTTGGATCATACTGAATGTATGAAAATGCTAAATGATGCTGGAATCTACTTGATCTTGGA TGTTAACAACCCAGACGCTTCAATTTCTAGACACAACCCATCTTGCTCTTACAACGCCGA CTATTTACAAAGTGTCTTTGCCACTATCGATGCCTTTGCTGACTACGAGAATGTCTTGGG GTTCTTTGCTGGTAATGAAGTCATCAACAGCAAGAACACTACAGATACTGCTACTTACGT TAAAGCCGTGGTGAGAGACATGAAGAAGTATTTGAGGGCCAGAAAGTATAGACAAATTCC AGTTGGTTACTCCGCTGCGGATGTATCTTCCAATAGGCTCTTGGCGGCTGAGTACTTCAA CTGTGGTGATGATGAAGATGCCAGGATTGACATGTTTGGTGTTAACGATTACTCCTGGTG TGGCCGCTCCTCATTCCAAACCTCCGGTTATTCCAACAAAATGACATTGTATAAAGGTTA CTCCATCCCAATCTTCTTAAGTGAGTTCGGTTGTAACGAGGTTCCAGGTTCCAGGCCCTT CACTGAAATTGAGGCTATCTATTCAACCAGAATGTCCTCTATTTTCTCAGGTGGTCTAGT TTACGAATACTCTAACGAAGATAACAAATACGGGTTGGTCCAAATAACCAGCGATTCTAA CGTGACTAAGCTAGATGACTATCAAAACTTGAAAAAAGAATACAGCAGTGTTTCCGATCC AGAAGGTGATGGCGGGTACTCCACTTCCAACAAATATTCCGAATGTCCAGACTATGAGGA GGGAGTTTGGGAGGCCAATAACACTCTACCTGCAATGCCAAGTGCGGCCAGTGTTTACTT TAGCAGTGGGGCAGGTGCTCCTATGGGGACCGGTGTACCTACACAGGACTCCTGCGACAG TGATGATGATGAAGACACAGAAAGTACCAGTGATGTCGCTTCCACCACCTCCACCACCTC TGATGAAACCAGCTCCAGCGCTATTTCCTCAACTACTAGCTCTGCAAGCTCTAATTCCAC ATCCACTAGTGGCACTTCTTCCACTTCTGCTTCTTCCTCCAAGTCAAACGACGCAGCAGG GTTGGAAATTCCAATGATTTTCCAGGGTTTAGCTTCCATCTGGAATTACATCATTTGAGC TTTCGAAAAAAAAAACCTAAAAGCTCGAGTCTTTAGTTGTACAAATACCTTATGGTTAAA AAAGAAAACCGTTTTTTTTTTTTTTATTAAGCTAGCCTCTCGTTCAATACACCTTCCTTA TTTGAAAGAGAGAAAAGTTTCTTTATATATCTCATATATCAACCCGATATATTTCCGGCA AGTAACTTTCAAGCAAACATGTTTTTGTCCATATCCCTTAATATATCCATGACACTCTTC AATTCCACTTTCCTACCTTTAACGTTCAACTGACTGATAATGCTATCCTCGGAAGGCA
Coding sequence
>SAKL0F05456g.cds ATGCACTTTCTATCGTTGAGTGTCAAGATTTTATCCCTAGTAGGTATGGCTACTGCTGCT ACAACTACTTCAACGTCTAGTTCCAGTTCCAGTTCGAAAACATCGAGCGCTTCCTCTTTG CCGGTTATCAACATTACTGGTAATGCGTTTTTCAACTCTGAAAACGGGGAGAGATTCTAC ATTCGTGGTGTAGACTACCAACCTGGTGGATCTTCAAACTTGACAGATCCATTGGCTGAT GTTACAATCTGTAAGAGAGACATTCCAGTATTTGAAGATTTGGGTATTAATACAATCAGA GTCTACACCGTGGACAACTCCTTGGATCATACTGAATGTATGAAAATGCTAAATGATGCT GGAATCTACTTGATCTTGGATGTTAACAACCCAGACGCTTCAATTTCTAGACACAACCCA TCTTGCTCTTACAACGCCGACTATTTACAAAGTGTCTTTGCCACTATCGATGCCTTTGCT GACTACGAGAATGTCTTGGGGTTCTTTGCTGGTAATGAAGTCATCAACAGCAAGAACACT ACAGATACTGCTACTTACGTTAAAGCCGTGGTGAGAGACATGAAGAAGTATTTGAGGGCC AGAAAGTATAGACAAATTCCAGTTGGTTACTCCGCTGCGGATGTATCTTCCAATAGGCTC TTGGCGGCTGAGTACTTCAACTGTGGTGATGATGAAGATGCCAGGATTGACATGTTTGGT GTTAACGATTACTCCTGGTGTGGCCGCTCCTCATTCCAAACCTCCGGTTATTCCAACAAA ATGACATTGTATAAAGGTTACTCCATCCCAATCTTCTTAAGTGAGTTCGGTTGTAACGAG GTTCCAGGTTCCAGGCCCTTCACTGAAATTGAGGCTATCTATTCAACCAGAATGTCCTCT ATTTTCTCAGGTGGTCTAGTTTACGAATACTCTAACGAAGATAACAAATACGGGTTGGTC CAAATAACCAGCGATTCTAACGTGACTAAGCTAGATGACTATCAAAACTTGAAAAAAGAA TACAGCAGTGTTTCCGATCCAGAAGGTGATGGCGGGTACTCCACTTCCAACAAATATTCC GAATGTCCAGACTATGAGGAGGGAGTTTGGGAGGCCAATAACACTCTACCTGCAATGCCA AGTGCGGCCAGTGTTTACTTTAGCAGTGGGGCAGGTGCTCCTATGGGGACCGGTGTACCT ACACAGGACTCCTGCGACAGTGATGATGATGAAGACACAGAAAGTACCAGTGATGTCGCT TCCACCACCTCCACCACCTCTGATGAAACCAGCTCCAGCGCTATTTCCTCAACTACTAGC TCTGCAAGCTCTAATTCCACATCCACTAGTGGCACTTCTTCCACTTCTGCTTCTTCCTCC AAGTCAAACGACGCAGCAGGGTTGGAAATTCCAATGATTTTCCAGGGTTTAGCTTCCATC TGGAATTACATCATTTGA
Predicted translation product
>SAKL0F05456g.aa MHFLSLSVKILSLVGMATAATTTSTSSSSSSSKTSSASSLPVINITGNAFFNSENGERFY IRGVDYQPGGSSNLTDPLADVTICKRDIPVFEDLGINTIRVYTVDNSLDHTECMKMLNDA GIYLILDVNNPDASISRHNPSCSYNADYLQSVFATIDAFADYENVLGFFAGNEVINSKNT TDTATYVKAVVRDMKKYLRARKYRQIPVGYSAADVSSNRLLAAEYFNCGDDEDARIDMFG VNDYSWCGRSSFQTSGYSNKMTLYKGYSIPIFLSEFGCNEVPGSRPFTEIEAIYSTRMSS IFSGGLVYEYSNEDNKYGLVQITSDSNVTKLDDYQNLKKEYSSVSDPEGDGGYSTSNKYS ECPDYEEGVWEANNTLPAMPSAASVYFSSGAGAPMGTGVPTQDSCDSDDDEDTESTSDVA STTSTTSDETSSSAISSTTSSASSNSTSTSGTSSTSASSSKSNDAAGLEIPMIFQGLASI WNYII*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0F05456p