HomeSAKL0F02068g
similar to uniprot|P13711 Saccharomyces cerevisiae YGL205W POX1 Fatty-acyl coenzyme A oxidase, involved in the fatty acid beta-oxidation pathway
Element type: CDS
Element length: 2250 nucleotides,
on sense strand of
Sakl0F: 178313..180562.
Other names:
SAKL-ORF6147
Coding sequence: 750 codons.
Element length: 2250 nucleotides,
on sense strand of
Sakl0F: 178313..180562.
Other names:
SAKL-ORF6147
Coding sequence: 750 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0456 GL3C0456.F1 GL3C0456.N1Orthologs by synteny: ZYRO0E08338g KLTH0G01914g KLLA0F09933g ERGO0E16500g
Protein SAKL0F02068p 
similar to uniprot|P13711 Saccharomyces cerevisiae YGL205W POX1 Fatty-acyl coenzyme A oxidase involved in the fatty acid beta-oxidation pathway localized to the peroxisomal matrix
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>SAKL0F02068g.nt TTTTCTTGAATAATACCAACCACAGCAAACCAGTCCATGCTCTTGTTGGAAACAAAGTTA ATAATCTGGGTGTTGTTCAAATTTGCGTGTCTTGATGTTAGTTTTGCCGGTTTCCGTGAA ACGTCGCCGTCAAACACTTGGGAGGTATACAAAGAGTTTGCAGTGACAAACCCTAACGTG TCGTCACTTAGCCATTTCCAAAAAAGAACGGGCTCGTCCAAGGTAAAAGACTTTAGCTTC GATTTGGCCTCTAGATTAAAGATTTGAACTATGGTGCCATTGGCTCTCACAGAGATAACC ATCTGAGAAGGATGCATGATAGCACTGTCACCACCCATATTTTTCCTGGTGACTTGGTTT TCATTTTGCAAGTCGACAATAGCTACGGAGTTGTTCCCATTTTGTGATTCGCGTACAGTA ACGTAGTGGTCACTTTCAAACGTAGTCGATCTGAAGTCTAGAGATTGAGGGGAGATCCCT AGAGAGGTCAGATCGACCAATTCAGTAAAATCAATTGGTAGGTCACTCATCTTTCTTCTA TTCCTGCAATCAATAAGGTGATACTTGAAGATAGTAAGCAGCAGTCCTTGTCAAAGATCG AGAGTGAGTGTACTTGTTTTGGTGGATCTGATTCGAAAGTCGGCAAGTTGTAAGGTATTT TATTTTGCCACCGAGGCCCGAAGTTACAGAGGGGAGGAGGACTCGAGAATAGGGGTACCG TCGTCCATGACATATTTCATATGTAGTCCGGGTAATTGTTTTTGTTGTGTGTGGGTTCTA GGATTTTAGAATATTAACTCCTTTCGCCTTTAATATTTTCTGTCCGATCAGCGCTCCCTA AATATATGTCACTTAATACGTATGATAAGTCTCAAGTGTCGGCGTCAGCAAGAAAAGTTG GGGAAACAATGCACAAGAAAAAACGTATATATATAAAGCCCGTTGTTTTTGGTTACGAGC AAAAAGTGTATCCAAAAGACTCACAAGTTATATTAGAAAAATGACCAGAACGAGTACTAC GAATACGGACTCGCCCACCTTTAAACCGCAAAAGTTCATACAGCAGGAACGTAATAGATC CACTCTTCAAAAGGACCAAATAAACATCTTTTTGGAATCCAACCCCGAGCAAGCCGCGTT GACTCATGAGTTAGTGGATCAAATTACATCCGATCCAATTTTGAAAACAGAAACTGACTA TTATGAGTATGATAAGCAACAGCACCGCTCGATGACAGCGAGAAAGATCAGCAGGATGTC TTTGTATATGGAAGAGGATATTAAGAAAGCTAAGAAGAACTACAGAACCGATTTAATCCG GGGCCTTCAAGATAGCACAGACAATTCTTTGATTACGAACAAAGATTTGGTTGTTTTTGA CAAGCGCTTATCATTAATGGCTAACGTGGACCCCCAGTTAGGAACCCGTATCGGGGTTCA TCTAGGTTTATTTGCCAATTGCATCAAGGGTAATGGTACTGATGAGCAGATACGGTACTG GCTACAAGAGCGTGGTGCTGTTTTTATCAAGGGTATATACGGTTGTTTTGCAATGACTGA GCTAGGCCATGGGTCTAATGTTGCTCAGTTACAAACTAGAGCTGAGTACGACCCTGCAAT CGATTGTTTTAAGATCAACACCCCAGATTTGACTGCCACAAAATGGTGGATTGGCGGTGC TGCCCATTCAGCAACCCATGCAACGGTATATGCACGTTTGATTGTGAAGGGGAAAGATTA TGGCGTCAAGACTTTTGTTGTTCCCCTACGTGATCCAGACACGTTCCAACTGCTTCCAGG CGTTTTCATTGGGGATATAGGTGCAAAGATGGGGCGTGATGGGATCGACAACGGTTGGAT TCAGTTCAAAAATGTTGTTATCCCTCGTGAATTCATGTTGGGTAGGTTTACCAAAGTCAT TCCAGGCGATTCCGAACCTCATGTTCAGACCGAGCCGCTTCTAGATCAGATATCAGGCTA TAGCGCACTACTTAGTGGCCGTGTCAATATGGTTATGGATTCATTTAGATTCGGTTCCAG GTTTGCTACTATTGCCACAAGGTATGCGGTAGGTAGGCAACAGTTTGGTAACTCCAAGAA AAGTAATGAAGAGACGCAGTTGATGAATTATCCATTGCATCAATACCGTGTTTTACCACA ACTAGCCCTCGTTTATTTGATTTCTCCAGCAGCACATAACCTATTGAACAGCTACTACGC CACTCTTGACGACTTGTATAAGACCTCTTCAGGTGGCAAACCAGACAAAAAAAAGCTACT GGTGGTGAGCGAAAAGTTAAAGGATTTATTTATTGACAGCGCTAGCTTAAAGGCTACTAA TACCTGGCTTGTTGCCCAACTAATCGATGAGCTAAGGCAAACGTGTGGTGGGCATGGTTA CTCCTCATACAATGGATTTGGTAAGGGTTATAACGATTGGGTTGTCCAATGCACCTGGGA GGGTGATAACAACATCTTATCTTTGACTTCGGCAAAAAGTATTTTGAAGAAATTTGCAGA GTTGCCAAACGGGAAAGTGGCTTCCTCGGACTCAAATTCTTCTTTTGCTTATTTAACGAC CCAATTTGTCGGTGCCTGTTTGAAGGGAGGCAAAGCTACAGTCACAAAACTAGAAAAGCT TTCCGATTTCACTGAGATTTGGGGAGTCATGCTGGTAAAACTAATCCACCATTGCATAGA ATTGGTTTCCAATGGTCAAAAGATCGATTCCATTTCAAACCATTTGGTCATGGTTTCAAG GTTCCACGCTTTCCATTGTATGTTGCAAGAGTACTACCACAAGTTAAACTCGGCCCATAG CAGTTACATCTCAGATGAACATACCAGGAACGTTATGTGGAAAATTTACCAGTTGTTCTC CGTATATTACATTGACAGGTATTCCGGTGAATTCCAACAGTTCAAGATTTTCACGCCGGA TCAAATTTCCAATGTTGTCCAACCCAAATTGCTAGAGTTGCTACCGCAGGTACGTGAGGA ATGTATTGCTCTTACAGATGCATTTGAATTACCAGATGCGGTGTTGAACGCGCCTATTGG TTACCATGATGGTGACATTTACCACAACTACTTCAACGAAGTGGTCAAAAACAACCCTGT TGAGCCCGATGGCGCAGGGAAGCCTGAATACCACGAATTGTTGACCACAATGCTAGGCAG AGGGTTTGAGTTTCAAACCCGTATGAAGGGTTCGTGTGATCCTGAAACATTGGGTAAACT AGGTAAATGAACAGAAAAGCGGATGTGTGCTATCTCTGAACTCGCATTTTTTTTTTACCC ATACCAGTCCGTATTTTTTCACGGAATCGCTTATGTCTTTATGTCTTTGAATATTTATAA CGAATGTTGTTTCTTCTTGTTTTCTTTTACTCTTTTTGTACTGAGAAAACACTGACGCTG ACATCACATTTCTCTGTTCACATGCGAAATCCGCAGAGGGCAGGAGGGGACCAATAGGAG AAAATTTTCGTGGCACGCAAAATCAAGTACAAAAAACGCAGGGAAAAGCGGTACTAAAAG CAAAAGTCTG
>SAKL0F02068g.cds ATGACCAGAACGAGTACTACGAATACGGACTCGCCCACCTTTAAACCGCAAAAGTTCATA CAGCAGGAACGTAATAGATCCACTCTTCAAAAGGACCAAATAAACATCTTTTTGGAATCC AACCCCGAGCAAGCCGCGTTGACTCATGAGTTAGTGGATCAAATTACATCCGATCCAATT TTGAAAACAGAAACTGACTATTATGAGTATGATAAGCAACAGCACCGCTCGATGACAGCG AGAAAGATCAGCAGGATGTCTTTGTATATGGAAGAGGATATTAAGAAAGCTAAGAAGAAC TACAGAACCGATTTAATCCGGGGCCTTCAAGATAGCACAGACAATTCTTTGATTACGAAC AAAGATTTGGTTGTTTTTGACAAGCGCTTATCATTAATGGCTAACGTGGACCCCCAGTTA GGAACCCGTATCGGGGTTCATCTAGGTTTATTTGCCAATTGCATCAAGGGTAATGGTACT GATGAGCAGATACGGTACTGGCTACAAGAGCGTGGTGCTGTTTTTATCAAGGGTATATAC GGTTGTTTTGCAATGACTGAGCTAGGCCATGGGTCTAATGTTGCTCAGTTACAAACTAGA GCTGAGTACGACCCTGCAATCGATTGTTTTAAGATCAACACCCCAGATTTGACTGCCACA AAATGGTGGATTGGCGGTGCTGCCCATTCAGCAACCCATGCAACGGTATATGCACGTTTG ATTGTGAAGGGGAAAGATTATGGCGTCAAGACTTTTGTTGTTCCCCTACGTGATCCAGAC ACGTTCCAACTGCTTCCAGGCGTTTTCATTGGGGATATAGGTGCAAAGATGGGGCGTGAT GGGATCGACAACGGTTGGATTCAGTTCAAAAATGTTGTTATCCCTCGTGAATTCATGTTG GGTAGGTTTACCAAAGTCATTCCAGGCGATTCCGAACCTCATGTTCAGACCGAGCCGCTT CTAGATCAGATATCAGGCTATAGCGCACTACTTAGTGGCCGTGTCAATATGGTTATGGAT TCATTTAGATTCGGTTCCAGGTTTGCTACTATTGCCACAAGGTATGCGGTAGGTAGGCAA CAGTTTGGTAACTCCAAGAAAAGTAATGAAGAGACGCAGTTGATGAATTATCCATTGCAT CAATACCGTGTTTTACCACAACTAGCCCTCGTTTATTTGATTTCTCCAGCAGCACATAAC CTATTGAACAGCTACTACGCCACTCTTGACGACTTGTATAAGACCTCTTCAGGTGGCAAA CCAGACAAAAAAAAGCTACTGGTGGTGAGCGAAAAGTTAAAGGATTTATTTATTGACAGC GCTAGCTTAAAGGCTACTAATACCTGGCTTGTTGCCCAACTAATCGATGAGCTAAGGCAA ACGTGTGGTGGGCATGGTTACTCCTCATACAATGGATTTGGTAAGGGTTATAACGATTGG GTTGTCCAATGCACCTGGGAGGGTGATAACAACATCTTATCTTTGACTTCGGCAAAAAGT ATTTTGAAGAAATTTGCAGAGTTGCCAAACGGGAAAGTGGCTTCCTCGGACTCAAATTCT TCTTTTGCTTATTTAACGACCCAATTTGTCGGTGCCTGTTTGAAGGGAGGCAAAGCTACA GTCACAAAACTAGAAAAGCTTTCCGATTTCACTGAGATTTGGGGAGTCATGCTGGTAAAA CTAATCCACCATTGCATAGAATTGGTTTCCAATGGTCAAAAGATCGATTCCATTTCAAAC CATTTGGTCATGGTTTCAAGGTTCCACGCTTTCCATTGTATGTTGCAAGAGTACTACCAC AAGTTAAACTCGGCCCATAGCAGTTACATCTCAGATGAACATACCAGGAACGTTATGTGG AAAATTTACCAGTTGTTCTCCGTATATTACATTGACAGGTATTCCGGTGAATTCCAACAG TTCAAGATTTTCACGCCGGATCAAATTTCCAATGTTGTCCAACCCAAATTGCTAGAGTTG CTACCGCAGGTACGTGAGGAATGTATTGCTCTTACAGATGCATTTGAATTACCAGATGCG GTGTTGAACGCGCCTATTGGTTACCATGATGGTGACATTTACCACAACTACTTCAACGAA GTGGTCAAAAACAACCCTGTTGAGCCCGATGGCGCAGGGAAGCCTGAATACCACGAATTG TTGACCACAATGCTAGGCAGAGGGTTTGAGTTTCAAACCCGTATGAAGGGTTCGTGTGAT CCTGAAACATTGGGTAAACTAGGTAAATGA
>SAKL0F02068g.aa MTRTSTTNTDSPTFKPQKFIQQERNRSTLQKDQINIFLESNPEQAALTHELVDQITSDPI LKTETDYYEYDKQQHRSMTARKISRMSLYMEEDIKKAKKNYRTDLIRGLQDSTDNSLITN KDLVVFDKRLSLMANVDPQLGTRIGVHLGLFANCIKGNGTDEQIRYWLQERGAVFIKGIY GCFAMTELGHGSNVAQLQTRAEYDPAIDCFKINTPDLTATKWWIGGAAHSATHATVYARL IVKGKDYGVKTFVVPLRDPDTFQLLPGVFIGDIGAKMGRDGIDNGWIQFKNVVIPREFML GRFTKVIPGDSEPHVQTEPLLDQISGYSALLSGRVNMVMDSFRFGSRFATIATRYAVGRQ QFGNSKKSNEETQLMNYPLHQYRVLPQLALVYLISPAAHNLLNSYYATLDDLYKTSSGGK PDKKKLLVVSEKLKDLFIDSASLKATNTWLVAQLIDELRQTCGGHGYSSYNGFGKGYNDW VVQCTWEGDNNILSLTSAKSILKKFAELPNGKVASSDSNSSFAYLTTQFVGACLKGGKAT VTKLEKLSDFTEIWGVMLVKLIHHCIELVSNGQKIDSISNHLVMVSRFHAFHCMLQEYYH KLNSAHSSYISDEHTRNVMWKIYQLFSVYYIDRYSGEFQQFKIFTPDQISNVVQPKLLEL LPQVREECIALTDAFELPDAVLNAPIGYHDGDIYHNYFNEVVKNNPVEPDGAGKPEYHEL LTTMLGRGFEFQTRMKGSCDPETLGKLGK*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0F02068g