HomeSAKL0C13024g
similar to uniprot|Q08271 Saccharomyces cerevisiae YOL132W GAS4 1,3-beta-glucanosyltransferase, involved with Gas2p in spore wall assembly
Element type: CDS
Element length: 1467 nucleotides,
on anti-sense strand of
Sakl0C: complement(1156990..1158456).
Other names:
SAKL-ORF9667
Coding sequence: 489 codons.
Element length: 1467 nucleotides,
on anti-sense strand of
Sakl0C: complement(1156990..1158456).
Other names:
SAKL-ORF9667
Coding sequence: 489 codons.
Homologs and Orthologs
Homologs in protein families: GL3R0042 GL3R0042.F2 GL3R0042.N2Orthologs by synteny: ZYRO0C02926g KLTH0F19096g KLLA0E07349g ERGO0D05236g
Protein SAKL0C13024p 
similar to uniprot|Q08271 Saccharomyces cerevisiae YOL132W GAS4 Putative 1,3-beta-glucanosyltransferase has similarity to Gas1p localizes to the cell wall
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>SAKL0C13024g.nt GAGCTGCACCACGTTTCTTTCGTAGGTGTGGTTAGAAACGTTATTGACCATACCGCTAGT ATCAACCTAACCATTGAGGATGGCACAGGACAAATAGAAGTTAGAAAATGGAGTGATGAC TCCGGCGATATTGCCAACGCCAGCCAGCCTGATGAAAATACTAACGAGGGCAATCAGAAC TATAACTCTCAAGTTGCTCAGCTCTATCAAGTCGGGACTTATGTTAAAGTATTTGGTGCT TTGAGGGAATTTAGTGGAAAGAAAAACGTCCAATACGCTGTTATCAAACCTGTAGACAGT TTCAATGACGTGATTGCACATCACCTAGCATCCATTAAGTGTCACGCAATCGCCAATGGG AAGATACAATCAGAGACACAACACGGAGACAAAGCATTCGGTCAAGATCAGCAGCAAAGT CTATTTGTCCAAGACACTTCTGATGGAGAACCAAAAACTGCACTACAAAGAATCCTGGAG TTTTGTAAACAACAGTGTAAAAATAAGGATGCCAACAATTTTGCTGTTCACACCAAGCTA ATCGCTCAATCCTTGGGAATGATTGAGGATGATGTTAGGATGTATTGCCAAACTTTGACT GAGCAAGGTTTCATCTATCCAACCTTTGATGATTGCAGTTACTTCGTCTTGTAAGCTACA AAGGACAACGGACTACTATATACTGTTTGTATCTTCATATCTACCATAGCAATTGCCTGG ATTATTTTGAAATATTTTTCACTAGTATAAAGAGAGAAGTTACAATTGTAAGATGAGATG GATGTGAAGATTGTCAATTTACTGCTTATGAGCCCATGTAAATCACGTGATGCTCTTCCC AAGAATTGCGGATCGTGACACAAAAACATTCAAAGATGTCTGTGACGCCTCCCAAATAGA ACGCGAATAAAAGCAAACAAGGAAATTAACTTTTACCTCTGTTTGGATTTGAATCAACAT ATCACTCGATTTTGGAGCTTCGAAATTTATAATAGATATTATGAAGCAAACCGGTACCCA TATGTCTACCGTTCATTTTGTTATCGCCTTTTTGTCGCTACACGTAGCAATTGCCGCCGC CTTCATACACCCAATTGAAGTGAAAGGAAACCACTTTGTTGATGCCATCACCAATGAGCC ATTTTTCATCAAAGGCGTTGACTATCAGCCTGGTGGCTCTTCGGAAGTTAGTGAGAAACA GGATCCACTTTCAGATCCGAATACCTGTGCTCGTGACATAATACTTTTCCAAGAGCTAGG TATCAATACCATAAGAATTTATTCTATCAATCCAGCCTTAAACCATGATAAATGCATGAC CATGCTCGCTTCTGCCGGTATCTACCTAATATTGGACGTTAATTCTCCGTTGCAAAACCA GCATTTAAACCGTTACGAACCTTGGACTACTTACAATCCTCATTATTTGGAACATGTTTT CAAAATTATTGAGCAGTTTGGTTACTACAACAATACTTTAGGGTTCTTTGCTGGTAATGA AATTATAAATGATAAAAAATCGGCACGGCATTCCCCGCCTTACGTCAAAAGGTTAATAAA CGATATGAAATTGTATATAAAAGGACATTCACCAAGAACCATCCCCGTTGGTTATTCTGC TGCAGATGACTTAAAGTACAGAGTTCCACTCTCCAAGTACTTAGAATGTTTGGATCCCAA TTATCCGGAAGCCAGTGTTGATTTCTATGGTGTCAATTCGTACCAATGGTGTGGAGGGCA AACTTTTGAAAGCTCCGGTTATGATGCTTTAGTAGAGGCCTACAAAAATTTTACCAAACC GGTGTTCTTCTCTGAATTTGGTTGCAATGAAGTTTTGCCAAGGACTTTTGACGAGGTTTC AACAATATATTCCAAAGACATGCACATGGTGTTCAGTGGCGGGTTGGTTTACGAATTCAC TCAAGGGACAAATAATTACGGCTTGATTGAAGTCGACACTGAAGGAAACGCACACTTGCT AAACGACTTTGACAGTTTGAGAACACAATATGCCTCCGTCAGCTTACCAACTCTGCAACA AATTTCTCGCAATGTGATATCTGACCCTATATTAAACAGGCGAGCCTCTTCTTTACACAT CCCGGTGTGTAATCATGAGTATGAGAACATAGAAATTACAGCAAAGGTACCCAATACATT GGCTTCGGATTTTCTCAAGCGTGGTGTTAGAGTCACTCGTGGGAAATATGTGAATTTAGC GGACAAGGATTTGGTGACTTCGTATAAGATTTATGACAAAAACGGAAAGTCATACAAGGA AAGAACAAAAGTTGAGGTTGTGCAAAATATCAACCCACTGTCTGATAGTAACGGTCAAAA TGTAAACAAAGTTCAAAATCTGGCCGCTTCAACATTTTCAAACGTCAATATCCCGTTCTT GCTAACTTGCGTATTCAGCTATCTGCTATTAGAAACCGGATTTCAAGTTGCAATTGCATC TTTCTAACACAACTGAAATCAACCAAAAGAGAGAAAAAAAAAAAAAAAAAAAAAAAAGAA GGAAAAGAAAAAGGTAGAGTGAAGAGGGAAGGTGTAGCAGAAAGAGCTATAGCATTTATT TATTTTGTAATTCACCGTGTGTCCTACGCTCAAAATCGTAGGAATACAGAATGTAACCAT TATTGTCTCTGACCTGAACAGGAACGCCACCAATTAACACAGGTTTCAATAATAATTCCC AATCATACCTAGTTCTTGGTGTGCAGAACAGCCATGTCCTTGACATCCTAATCTGTACAG ACTTAAA
>SAKL0C13024g.cds ATGAAGCAAACCGGTACCCATATGTCTACCGTTCATTTTGTTATCGCCTTTTTGTCGCTA CACGTAGCAATTGCCGCCGCCTTCATACACCCAATTGAAGTGAAAGGAAACCACTTTGTT GATGCCATCACCAATGAGCCATTTTTCATCAAAGGCGTTGACTATCAGCCTGGTGGCTCT TCGGAAGTTAGTGAGAAACAGGATCCACTTTCAGATCCGAATACCTGTGCTCGTGACATA ATACTTTTCCAAGAGCTAGGTATCAATACCATAAGAATTTATTCTATCAATCCAGCCTTA AACCATGATAAATGCATGACCATGCTCGCTTCTGCCGGTATCTACCTAATATTGGACGTT AATTCTCCGTTGCAAAACCAGCATTTAAACCGTTACGAACCTTGGACTACTTACAATCCT CATTATTTGGAACATGTTTTCAAAATTATTGAGCAGTTTGGTTACTACAACAATACTTTA GGGTTCTTTGCTGGTAATGAAATTATAAATGATAAAAAATCGGCACGGCATTCCCCGCCT TACGTCAAAAGGTTAATAAACGATATGAAATTGTATATAAAAGGACATTCACCAAGAACC ATCCCCGTTGGTTATTCTGCTGCAGATGACTTAAAGTACAGAGTTCCACTCTCCAAGTAC TTAGAATGTTTGGATCCCAATTATCCGGAAGCCAGTGTTGATTTCTATGGTGTCAATTCG TACCAATGGTGTGGAGGGCAAACTTTTGAAAGCTCCGGTTATGATGCTTTAGTAGAGGCC TACAAAAATTTTACCAAACCGGTGTTCTTCTCTGAATTTGGTTGCAATGAAGTTTTGCCA AGGACTTTTGACGAGGTTTCAACAATATATTCCAAAGACATGCACATGGTGTTCAGTGGC GGGTTGGTTTACGAATTCACTCAAGGGACAAATAATTACGGCTTGATTGAAGTCGACACT GAAGGAAACGCACACTTGCTAAACGACTTTGACAGTTTGAGAACACAATATGCCTCCGTC AGCTTACCAACTCTGCAACAAATTTCTCGCAATGTGATATCTGACCCTATATTAAACAGG CGAGCCTCTTCTTTACACATCCCGGTGTGTAATCATGAGTATGAGAACATAGAAATTACA GCAAAGGTACCCAATACATTGGCTTCGGATTTTCTCAAGCGTGGTGTTAGAGTCACTCGT GGGAAATATGTGAATTTAGCGGACAAGGATTTGGTGACTTCGTATAAGATTTATGACAAA AACGGAAAGTCATACAAGGAAAGAACAAAAGTTGAGGTTGTGCAAAATATCAACCCACTG TCTGATAGTAACGGTCAAAATGTAAACAAAGTTCAAAATCTGGCCGCTTCAACATTTTCA AACGTCAATATCCCGTTCTTGCTAACTTGCGTATTCAGCTATCTGCTATTAGAAACCGGA TTTCAAGTTGCAATTGCATCTTTCTAA
>SAKL0C13024g.aa MKQTGTHMSTVHFVIAFLSLHVAIAAAFIHPIEVKGNHFVDAITNEPFFIKGVDYQPGGS SEVSEKQDPLSDPNTCARDIILFQELGINTIRIYSINPALNHDKCMTMLASAGIYLILDV NSPLQNQHLNRYEPWTTYNPHYLEHVFKIIEQFGYYNNTLGFFAGNEIINDKKSARHSPP YVKRLINDMKLYIKGHSPRTIPVGYSAADDLKYRVPLSKYLECLDPNYPEASVDFYGVNS YQWCGGQTFESSGYDALVEAYKNFTKPVFFSEFGCNEVLPRTFDEVSTIYSKDMHMVFSG GLVYEFTQGTNNYGLIEVDTEGNAHLLNDFDSLRTQYASVSLPTLQQISRNVISDPILNR RASSLHIPVCNHEYENIEITAKVPNTLASDFLKRGVRVTRGKYVNLADKDLVTSYKIYDK NGKSYKERTKVEVVQNINPLSDSNGQNVNKVQNLAASTFSNVNIPFLLTCVFSYLLLETG FQVAIASF*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0C13024p