HomeSAKL0C09834g
similar to uniprot|Q12400 Saccharomyces cerevisiae YOL093W TRM10 tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs
Element type: CDS
Element length: 912 nucleotides,
on sense strand of
Sakl0C: 888944..889855.
Other names:
SAKL-ORF10180
Coding sequence: 304 codons.
Element length: 912 nucleotides,
on sense strand of
Sakl0C: 888944..889855.
Other names:
SAKL-ORF10180
Coding sequence: 304 codons.
Homologs and Orthologs
Homologs in protein families: GL3R1757 GL3R1757.F1 GL3R1757.N1Orthologs by synteny: ZYRO0B06226g KLTH0C09922g KLLA0C03740g ERGO0D11880g
Protein SAKL0C09834p 
similar to uniprot|Q12400 Saccharomyces cerevisiae YOL093W
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>SAKL0C09834g.nt GTCCACAGATGTTTCAGATAGCCCAGCGACTCATCCAGCGTTGGCGCAAGCAGCATTTTT TTGACCACCAGTGGGTGAGGCGAGTCCACGATCCTGAAAACATTGTCGCCGTTTACCAGG CCAAACCCAGCCACGGTGCTCTGCAGGTTGTTGATGGCCTGTCTCATGTCGCCCTCTGCG GTGAAAATGATGGCTTCCAGCCCGTCGTTGGTGTACTGGACGTCTTCTGCCTTGATAATC TCCAGCAGCCTCTTCAGCACCTGGTCGTCCTGCAGCTTGGAGTAGCGCAGGATCGCACAC CTACTCTGCAGAGGCTCGATGATCTTGTTGGACTGGTTGCATGCAAACGCAAACCTGGTG GTGTTGGAGTACAGCTCCATGGTTCTTCTCAGAGCCTGCTGGGCGCCGCTGGTCATGGAA TCCGCTTCGTCGAGAATCACAATCTTGTGCTTGCCCGGTGGGAGGCTTACCTTCTTCTGG GCAAACATCTTGATCTGGTTCCGGACCACGTCGATACCTCTGTCGTCGGAGGCGTTCAGC TCGAGCACGGCGTGGGAGTACGAGTCGCCGAGGAGTTCGTGCGCCAGGCAGTGGATGCTT GTGGTCTTGCCAATACCCGGAAGCCCGCTGATGATCATATGTGGCATATTGCCGTCAATT GCAATCTGCTGGAGCCTGGCAACGGTGTCCTCGTTGCCGACAATGTCACGTAACAGGTGT GGCCGGTACTTTTCGACCCAGGGTAGTTCCAAGGATAATGCTCTGGACATTGGCGTACGG TGGCTTGGTGGTAGAAGAAATGCAGATAATTGCAGACTGTAGCGTCAGAGACCACACTTG CCCTTTTTTTTTTTTTTTTTCTTTCTTCTTCTCTCTTTCCTTCTCTTCTCTTTCTTTCTG TAGATTCATTTGGTGTTCACCTCACGCTGCACGAGAACCGAAGCCTGAAAAGTTTTCGCC GTGACGATATCAAGAAGAGGGCACACCCAATGTATTGGCGATGACCCTGCGCAGAATAGA AAGCACAGACACAAGCACAAGCATGGGGGAGCCTGTGGCAGAGAAAGAAGTACAAAGACA GCCTCCGCTGCCACCGGTACCGGAAGGAATGTCCAAGTCTCAGTGGAAAAAGCTGTGCAG AAAGCAACGGTTCGAGGAAACCAAGGCCCAATTCGCTGCGATCCGCAAGGAAAAGCGTAA AAAGGCCCGTGAGAATAAGCGGTCCAAGATCCAGGAGTTTCTGGACCGCGGGGAAGAGGT CCCGGAGGAGCTCAAGCGCAAACCCAGGGTGAACCAGGAGCAGCGTGACTCAGGGGTCAG CATTGTGATGGACTGCGCTTTTGACGACCTGATGAACGACAAGGAAATCGTCAGCATGAG CACACAGATCACCAGGGCCTACAGCTGCAATAAGCGGGAGCGCCACTATGCCAAGATTAA GGTTGCCAGTTTCGGCAAGAGGTTAAAGGCGCGGTTTGACAATGGGTTGAGCAACTGCGG GTACCAGCAGTGGAAGAACTTTGAGTTTACAGCAGAGGAGGGGTTTCCGGAGGACATGAG CAAGGTGGTGTACCTGACTGCCGACACAGATGAAAAGCTGGAGTCGCTGGAACCCGGCAT GACCTACATCGTCGGAGGCATAGTCGACAAGAACAGACACAAGTGTTTGTGCTACAACAA GGCAAAGGAGCTGGGCATTCCCACAAGAAGGCTGCCTATTGACGAGTACATCAAGCTGAG CGGGAGGAAGGTGCTGACCACGACCCACGTGATCCAGCTGATGCTAAAGTACTTTGACAA CCGTGACTGGAAGGAAGCGTTCGAAAGTGTGCTGCCGCAGAGGAAGCTGGAAGAGGAGCA GAAGCAGGAGCAGAAGCAGGAGCAGAAGCAGGAGCAGGAGCAGGAGCAGTAGACGTGCCC ATCCTTGTCCGGCAGTGCCCTCGTTCCCGTCGAAGGTGATATATTTAGTTCAGCCGACAC AGTTCTAGCAATGTTATTCTGCCAGCACATGCAGAACAAAGTCCGCGCATCCACACACAT AGGTATATACTCGACTAACCAATTGTTTTTTTTTTTTTTTTCTTTTGACCATATACATGC ACGCATACACATTTCCACAAACCTCTTCTGCAGCGCTTGCTGCGTAGATGGCTGCTTTCT CTGTGTGTCACTCTGATTTTTCCGTTTCCTTTTCTTTTTTTTTTTTTTTTTG
>SAKL0C09834g.cds ATGACCCTGCGCAGAATAGAAAGCACAGACACAAGCACAAGCATGGGGGAGCCTGTGGCA GAGAAAGAAGTACAAAGACAGCCTCCGCTGCCACCGGTACCGGAAGGAATGTCCAAGTCT CAGTGGAAAAAGCTGTGCAGAAAGCAACGGTTCGAGGAAACCAAGGCCCAATTCGCTGCG ATCCGCAAGGAAAAGCGTAAAAAGGCCCGTGAGAATAAGCGGTCCAAGATCCAGGAGTTT CTGGACCGCGGGGAAGAGGTCCCGGAGGAGCTCAAGCGCAAACCCAGGGTGAACCAGGAG CAGCGTGACTCAGGGGTCAGCATTGTGATGGACTGCGCTTTTGACGACCTGATGAACGAC AAGGAAATCGTCAGCATGAGCACACAGATCACCAGGGCCTACAGCTGCAATAAGCGGGAG CGCCACTATGCCAAGATTAAGGTTGCCAGTTTCGGCAAGAGGTTAAAGGCGCGGTTTGAC AATGGGTTGAGCAACTGCGGGTACCAGCAGTGGAAGAACTTTGAGTTTACAGCAGAGGAG GGGTTTCCGGAGGACATGAGCAAGGTGGTGTACCTGACTGCCGACACAGATGAAAAGCTG GAGTCGCTGGAACCCGGCATGACCTACATCGTCGGAGGCATAGTCGACAAGAACAGACAC AAGTGTTTGTGCTACAACAAGGCAAAGGAGCTGGGCATTCCCACAAGAAGGCTGCCTATT GACGAGTACATCAAGCTGAGCGGGAGGAAGGTGCTGACCACGACCCACGTGATCCAGCTG ATGCTAAAGTACTTTGACAACCGTGACTGGAAGGAAGCGTTCGAAAGTGTGCTGCCGCAG AGGAAGCTGGAAGAGGAGCAGAAGCAGGAGCAGAAGCAGGAGCAGAAGCAGGAGCAGGAG CAGGAGCAGTAG
>SAKL0C09834g.aa MTLRRIESTDTSTSMGEPVAEKEVQRQPPLPPVPEGMSKSQWKKLCRKQRFEETKAQFAA IRKEKRKKARENKRSKIQEFLDRGEEVPEELKRKPRVNQEQRDSGVSIVMDCAFDDLMND KEIVSMSTQITRAYSCNKRERHYAKIKVASFGKRLKARFDNGLSNCGYQQWKNFEFTAEE GFPEDMSKVVYLTADTDEKLESLEPGMTYIVGGIVDKNRHKCLCYNKAKELGIPTRRLPI DEYIKLSGRKVLTTTHVIQLMLKYFDNRDWKEAFESVLPQRKLEEEQKQEQKQEQKQEQE QEQ*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0C09834g