HomeSAKL0C05786g
similar to uniprot|P00431 Saccharomyces cerevisiae YKR066C CCP1 Mitochondrial cytochrome-c peroxidase
Element type: CDS
Element length: 1059 nucleotides,
on sense strand of
Sakl0C: 551987..553045.
Other names:
SAKL-ORF11384
Coding sequence: 353 codons.
Element length: 1059 nucleotides,
on sense strand of
Sakl0C: 551987..553045.
Other names:
SAKL-ORF11384
Coding sequence: 353 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0873 GL3C0873.F1 GL3C0873.N2Orthologs by synteny: ZYRO0G18172g KLTH0F05170g KLLA0B07557g
Protein SAKL0C05786p 
similar to uniprot|P00431 Saccharomyces cerevisiae YKR066C CCP1 Mitochondrial cytochrome-c peroxidase degrades reactive oxygen species in mitochondria involved in the response to oxidative stress
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>SAKL0C05786g.nt GGTTTCTCAGCTCCGTAAGCAACAGCGAGGTGTGTTTGAGGGCGTCCATGAGCTTGCGCT GTGAGAGACAGCGCTGCATGAGCACTGTTTGCTGTTTGACATTGGAGACTGCCTGGTCTA GGGACTCGGCATAAGACATGGCAATGTGCGAGGTAATTGTCCTTAAAAGACTTGAGAGTA AAGGGGTGGGGGAGGGAGTGTCCAGCTTCGAAGGCTAAAAAAGATAGCAGCGGATGTCGA GGCGTTGAGGATTTTTTTCAGTCAATGTGTAATTACATACGAATATTTCGGTTTTCCCGC CGCAAGGTCTGTGGGGTGAAGCTGGGACGTGGGAAAAGTGTGCGTGTATGTGTATGTGTG TGTGTGTATGTGTGTGTGTGTATATACGCCGCCTGTCTGTCACATTTTCTAAAAGGACAA TCTACAGAAAGGGTTGCGTCTTTCTGCGCATGTTGTCGTAGCACACATCGTCGAGGCCAT GTCGAGGACAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTCAT CTTACGAGGTCGGGCAAGAAAGTACCAGAAAGGTCGAGCAGGTACGAGACAGGGCAAGTA AGTACAAAAAGATCGTATACAGTTTTCTTTTATGTTTGCAATTATCGCATGGACGTGTGG CTTCCTTGTGGCAGCTGTTAGCAGACGTGGGCTTCTCCCAATCAAGCATGTTCCAGAGCA CCCGCCAAGACTGCCTGTTCCGGTACCTCAGATCACATATACGATTTCGAGCAATCTCCG CGCGTCTGACACAAACAAAAGGCTCCGGCTTATTCACTCACCTTCTCGCCTGAAAATCAT CTGAGTAATTAATGACGTGGGCCGATATCGCCGCGGGCGCGGCTGACAAAACTCGCCGAC TGTTCGAGCCGGTGTCAATCGCTATATAAACTGACCCCCTTTGAAATAAGGTAGCCACCG CTCGGCTCAGAGCGTTCTCTAATCAGCAACTGTCACCATAATGTCCGCATTTACCGCTAC ATTCGCAAGAACCATTCGCAACAACACAAAACCGCTCTATGCGCTAGCCGCGGCTACCGG TGCCCTCGGCTCCATTGTTGCCTACAACAACTACAACAACAACAACAACAACAACAGCAG CAGCAGCAACCGTGGTAACAAGGGTCTTGGCGCCCTTGCCGCCTCTGTTCCTTCTTTGCA TGCAGCCGCGGCCGAGAAAAGCACCCATGACTACCAAAAGGTCTATAATGCCATCGCCAC CAAACTCAGAGACGATGACGAGTACGACGACTACATCGGTTACGGCCCCGTTCTGGTGCG TCTTGCATGGCACACTTCTGGTACCTTCAACAAGAGCGACAACACTGGTGGCTCCTACGG TGGTACCTACCGTTTCGCTAAGGAGACCAGCGACCCCTCCAACGCCGGGCTCCAGAACGG CGCCAAGTTCCTCGAGCCAATCCTCGAGCAGTTCTCCTGGATCTCGCACGGTGACTTGTA CACCCTTGCGGGCGTGACTGCGGTGCAGGAGATGCAGGGCCCCAAGATTCCTTGGAGGTC CGGCAGAATTGACCAGCCAGAAGAAACCACTCCTGAAAATGGCAGACTTCCAGATGCCAC TCGCGACGCTAACTACGTCAGGAACTACTTTTCCAGATTCGGCTTCAACGACAGGGAAAT CGTCGCGCTTATCGGTGCCCATTCCCTAGGTAAAACCCACTACAAAAACTCTGGCTTCGA GGGCCCTTGGGACGCCTCCCCCAACGTCCTCACCAACGACTTTTTCGTCAACCTGCTAAA CGAACACTGGAAGCTTGAGACCAACAAGGCCGGCAACAAGCAGTACAACAACGACAAGGG CTGGATGATGTTGCCCACCGACATGGCCCTGGTGCAAGACGACAAGTTTCTGCGCTTTGT CAAGGAGTATGCCAACTACCAGGACGCCTTCTTTAAGGACTTTTCCTCCGCGTTTGTCAA GTTGTTGGAGAATGGTATCGAGTTCCCCGAGGGCAACAAGCCGCACGTGTTCAAGACTCT CGACGAGCAAGAGGACTAAACCCGGTGCACAGAGCCCATTCACCAGCTGACATTCTGAGC TACTGGTCCGCACATTTACATGTATACAAACTTTACCTATATGCGTAACCATTTACGTAT TTGTTTATGTATTTATTTATGTATTGACTTATGTATTGACTTATTTATTTGTTTGTTTGT TTGTTTGTTTGTTTGTTCATCCCTCCGCTATTTACGCAACCCGTCAAGTCACTGTGCCGC CTGCTACTTTGCCACCCGCCCCGTTCGCACCACTCCACCTGCCTGCTGTCCCTCACGATT CACATCATGTGACTTAGTA
>SAKL0C05786g.cds ATGTCCGCATTTACCGCTACATTCGCAAGAACCATTCGCAACAACACAAAACCGCTCTAT GCGCTAGCCGCGGCTACCGGTGCCCTCGGCTCCATTGTTGCCTACAACAACTACAACAAC AACAACAACAACAACAGCAGCAGCAGCAACCGTGGTAACAAGGGTCTTGGCGCCCTTGCC GCCTCTGTTCCTTCTTTGCATGCAGCCGCGGCCGAGAAAAGCACCCATGACTACCAAAAG GTCTATAATGCCATCGCCACCAAACTCAGAGACGATGACGAGTACGACGACTACATCGGT TACGGCCCCGTTCTGGTGCGTCTTGCATGGCACACTTCTGGTACCTTCAACAAGAGCGAC AACACTGGTGGCTCCTACGGTGGTACCTACCGTTTCGCTAAGGAGACCAGCGACCCCTCC AACGCCGGGCTCCAGAACGGCGCCAAGTTCCTCGAGCCAATCCTCGAGCAGTTCTCCTGG ATCTCGCACGGTGACTTGTACACCCTTGCGGGCGTGACTGCGGTGCAGGAGATGCAGGGC CCCAAGATTCCTTGGAGGTCCGGCAGAATTGACCAGCCAGAAGAAACCACTCCTGAAAAT GGCAGACTTCCAGATGCCACTCGCGACGCTAACTACGTCAGGAACTACTTTTCCAGATTC GGCTTCAACGACAGGGAAATCGTCGCGCTTATCGGTGCCCATTCCCTAGGTAAAACCCAC TACAAAAACTCTGGCTTCGAGGGCCCTTGGGACGCCTCCCCCAACGTCCTCACCAACGAC TTTTTCGTCAACCTGCTAAACGAACACTGGAAGCTTGAGACCAACAAGGCCGGCAACAAG CAGTACAACAACGACAAGGGCTGGATGATGTTGCCCACCGACATGGCCCTGGTGCAAGAC GACAAGTTTCTGCGCTTTGTCAAGGAGTATGCCAACTACCAGGACGCCTTCTTTAAGGAC TTTTCCTCCGCGTTTGTCAAGTTGTTGGAGAATGGTATCGAGTTCCCCGAGGGCAACAAG CCGCACGTGTTCAAGACTCTCGACGAGCAAGAGGACTAA
>SAKL0C05786g.aa MSAFTATFARTIRNNTKPLYALAAATGALGSIVAYNNYNNNNNNNSSSSNRGNKGLGALA ASVPSLHAAAAEKSTHDYQKVYNAIATKLRDDDEYDDYIGYGPVLVRLAWHTSGTFNKSD NTGGSYGGTYRFAKETSDPSNAGLQNGAKFLEPILEQFSWISHGDLYTLAGVTAVQEMQG PKIPWRSGRIDQPEETTPENGRLPDATRDANYVRNYFSRFGFNDREIVALIGAHSLGKTH YKNSGFEGPWDASPNVLTNDFFVNLLNEHWKLETNKAGNKQYNNDKGWMMLPTDMALVQD DKFLRFVKEYANYQDAFFKDFSSAFVKLLENGIEFPEGNKPHVFKTLDEQED*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0C05786p