HomeSAKL0A03520g
similar to uniprot|O13297 Saccharomyces cerevisiae YPL228W CET1 (ohnolog of YMR180C) Beta (RNA 5'-triphosphatase) subunit of the mRNA capping enzyme, a heterodimer (the other subunit is CEG1, a guanylyltransferase) involved in adding the 5' cap to mRNA
Element type: CDS
Element length: 1524 nucleotides,
on sense strand of
Sakl0A: 321709..323232.
Other names:
SAKL-ORF15404
Coding sequence: 508 codons.
Element length: 1524 nucleotides,
on sense strand of
Sakl0A: 321709..323232.
Other names:
SAKL-ORF15404
Coding sequence: 508 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0218 GL3C0218.F1 GL3C0218.N2Orthologs by synteny: ZYRO0E07700g KLTH0H03234g KLLA0C16049g ERGO0F02398g
Protein SAKL0A03520p 
similar to uniprot|O13297 Saccharomyces cerevisiae YPL228W CET1 Interacts with Ceg1p the mRNA capping enzyme alpha subunit removes gamma-phosphate from triphosphate- terminated RNA mRNA capping enzyme beta subunit RNA 5'- triphosphatase
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>SAKL0A03520g.nt TGTAAACCTACACCAAGCACAAACTCTGGAAAATTTCGTTTACCAACCTCTAGACATTGC AAATCCCCAACAATACTCTCAATACTCTCCTCCGTTATTGCAAGGAAACCTTTCGTCGTC TTCCGTCTCATCCTCGCCCACAACCGAGGGCGGCAAAAGTGAAATGTCTCTCAAGCTCAA AAACAATATAAGCAAATGCTTTGAAGACGACCTTTTCTTTTGTCCAAGGGGTCTGTTGAC CTCACAGGAACTCTCCACCTGTCAGCAGATGGATCTCTTTATGTTGGAGCAGATAAAAGA GACGCTACCTCCTCAGCAACCAAAGTTTAATCCCTATAAATCACAAAGCTTCAGCCCTGC TCCTGGTTCTGCACTGTGATTTTTTGTCTTATAGAGAAAGGCTTTTGGATACACTCTAGC ATGGGGCAAAAAGAGGGAAAGAAAAAAAAAGGAGTAGTTGAAGGATTTCAGCTGCCAAGG GAAAAGCGTTTAACGAGAGATTTTATTACAAACAAAGTGCAAAGATGGATAACCAATGGG TTCGTAAGGGTTTATTTTATTTTATTTTTTTTTGTTTTTAGTCTTTTTTCATATCATTAT TGTAGCAGTTACGGTTGTTTTTTTATCAGCTTATAGTTAGATACGTACACGGTGATCTTT AGTTAGGAAGATACCTTCAAAGTTTGTTCATCAAGAGCATATTTGTAACATTTGAGAGGC CTTTGACCGGCTTGGTGGCTGCAAAGGGGAAACTAGACTTCTTGTGCGCACGCGTCGAGC GTTATTTTGCTCTGGTCCGCGATTCTCCAGACCAAATGGTTGACATTATGGTCCTTCTTT CTTCCTTCCTTCCTTCCTCCCTCCCCATATACGTTTCTACGGTAGTGCCCAGTTTTTCGG CAAACTTCAACAGTCGTTGGAAGGCTCTGATGTGGGAAGGCTTTACCACTCTTGGATAGA AAGGGTGAAGCAAGAGGCAATTAGAGACTAAGGAGGACAAATGAGTGAACAGAGGGCTGT TCCAAAAAGAGCTTTATCCTTAGAAGATTTGGTAAACCACGATGAAAGGTCTGCTTCTGT CGATCCAAACGCTAACTTGAAACCATTGCCAGCATCGGAGGTCAAAAAAAGGTTGAGTGT GGATAGCAGCAACGACGGTAGCATTACAAAAGATCTGGATATCAAACAAGATAGTGGATC GATGCATGATGCGTTTGAATACAACCACAACGGAAGGAGTAACCGTGAAAGTGACGGGGA CGATGACGATGACAATGACGATGAAACTGACACCGACGACGAACTTGGTGTTGGCGACAT TGTATTTGACACCGACGACTTCAAATTCGACTACGAAAAACAGGAAAAGGACAATTTAGG TGCAGGCTCCAAGAAATCTCAAGAGACGGGTGCCGAGCCATCGGACGACAACGGTGTGGG CAGAAGCAACCGTCCCATTGACTCCGACCGCATCAAACAGAAGTCGGATGTCAAGGATAT CTTTCAAGAAAAAATGTCTTTGGAATCCAAGAAAAACAATATCAAAAAGGATTTAAAGGT GCTGAATGAAATTGCCGCCACCGCAAAGCCAAGTAGGTATAGGGTGGCTCCACAATGGGC TCAGAAGTGGAAGCCTACCGTGAAGGCGCTGCAAAACGTTGACATCAAAGACTTCAAAAT TGACGCTTCGTTTACCAACATTATCCCGGACGACGATCTGACGAAGTCCGTTCAGGACTG GGTGTACGCGACGATCTTATCCATCCAACCAGACCAACGACAATTCATCGAAATGGAAAT GAAATTTGGTATCATCGTAGAGGGCAGCGATACCAGTAGGGTCAACCCCCCGGTCTTTTC TCAATCCGTCTTTACGGACCCGGATGCGCACTTGACCCCAGATATCGACGAGCGTGTGTT TGTCGAACTGAACAAGTTTATCAAGGGCGTTTCTGAGTTGAACGAAAATACGGGCAAATT TAACATCATCGAATCCCAGACCACAGATTCTCTTTACAGAGTCGGGATTTCCACCCAGAG GCCTAGGTTTTTAAGAATGAGTAGAGATGTTAAAACCGGCCGTATCGGCCAGTTCATTGA AAAGAGGCATGTTTCACAGCTGTTGTTATACTCTCCAAAGGATAGTTATGATGTTAAAAT ATCCGTAAACCTGGAACTACCGGTACCGGACAACGACCCTCCGGAAAAGTATAAAGACCA CACCCCAGTAAGTTCAAGAAGCAAAGATCGTATCAGTTATATCCATAACGACTCCTGTAC AAGAATCGATATCACAAAGGTTGAAAACCACAACCAGGGTATCAAGCAGAAGACCACAGA GCACACTCATGAAGTAGAGTTGGAAGTGAACACTCCAGCGTTATTAAATGCGTTTGAAAA CATTACGCAGGATAGCAAGGGCTACGCTTCTATCATAAGGACGTTCTTGAACAATGGAAC TATTGTTAGAAGAAAGTTAACTACACTATCTTTCGAGATCTTTGAGGGCCAAAAAAAGGT CTAATGTGTTTTTGAGAACTGGTAGCACTGTAAGGCGTTGGTGGTCCACTTTTCTATTGT GTACCGTATATCATCTGATTCTATAGAAAGAAATATATGTGCATGTATAAAGAAAAGGAG AATAAAGGGAAAAACAAACGTGTTCTTTTTTTTTTTTTTTTTTTTTGTTTGTTTGTTTTC TTTGGGGGCTCTTAACACGCAACTCTATCACTATATATGCCTAGAATGTACGCTAATCTG ATAACAACTAGATCTTTGGCCATATTGACACTGTCCCTAGCCAGGTCCATCTTAGATCCA TCTA
>SAKL0A03520g.cds ATGAGTGAACAGAGGGCTGTTCCAAAAAGAGCTTTATCCTTAGAAGATTTGGTAAACCAC GATGAAAGGTCTGCTTCTGTCGATCCAAACGCTAACTTGAAACCATTGCCAGCATCGGAG GTCAAAAAAAGGTTGAGTGTGGATAGCAGCAACGACGGTAGCATTACAAAAGATCTGGAT ATCAAACAAGATAGTGGATCGATGCATGATGCGTTTGAATACAACCACAACGGAAGGAGT AACCGTGAAAGTGACGGGGACGATGACGATGACAATGACGATGAAACTGACACCGACGAC GAACTTGGTGTTGGCGACATTGTATTTGACACCGACGACTTCAAATTCGACTACGAAAAA CAGGAAAAGGACAATTTAGGTGCAGGCTCCAAGAAATCTCAAGAGACGGGTGCCGAGCCA TCGGACGACAACGGTGTGGGCAGAAGCAACCGTCCCATTGACTCCGACCGCATCAAACAG AAGTCGGATGTCAAGGATATCTTTCAAGAAAAAATGTCTTTGGAATCCAAGAAAAACAAT ATCAAAAAGGATTTAAAGGTGCTGAATGAAATTGCCGCCACCGCAAAGCCAAGTAGGTAT AGGGTGGCTCCACAATGGGCTCAGAAGTGGAAGCCTACCGTGAAGGCGCTGCAAAACGTT GACATCAAAGACTTCAAAATTGACGCTTCGTTTACCAACATTATCCCGGACGACGATCTG ACGAAGTCCGTTCAGGACTGGGTGTACGCGACGATCTTATCCATCCAACCAGACCAACGA CAATTCATCGAAATGGAAATGAAATTTGGTATCATCGTAGAGGGCAGCGATACCAGTAGG GTCAACCCCCCGGTCTTTTCTCAATCCGTCTTTACGGACCCGGATGCGCACTTGACCCCA GATATCGACGAGCGTGTGTTTGTCGAACTGAACAAGTTTATCAAGGGCGTTTCTGAGTTG AACGAAAATACGGGCAAATTTAACATCATCGAATCCCAGACCACAGATTCTCTTTACAGA GTCGGGATTTCCACCCAGAGGCCTAGGTTTTTAAGAATGAGTAGAGATGTTAAAACCGGC CGTATCGGCCAGTTCATTGAAAAGAGGCATGTTTCACAGCTGTTGTTATACTCTCCAAAG GATAGTTATGATGTTAAAATATCCGTAAACCTGGAACTACCGGTACCGGACAACGACCCT CCGGAAAAGTATAAAGACCACACCCCAGTAAGTTCAAGAAGCAAAGATCGTATCAGTTAT ATCCATAACGACTCCTGTACAAGAATCGATATCACAAAGGTTGAAAACCACAACCAGGGT ATCAAGCAGAAGACCACAGAGCACACTCATGAAGTAGAGTTGGAAGTGAACACTCCAGCG TTATTAAATGCGTTTGAAAACATTACGCAGGATAGCAAGGGCTACGCTTCTATCATAAGG ACGTTCTTGAACAATGGAACTATTGTTAGAAGAAAGTTAACTACACTATCTTTCGAGATC TTTGAGGGCCAAAAAAAGGTCTAA
>SAKL0A03520g.aa MSEQRAVPKRALSLEDLVNHDERSASVDPNANLKPLPASEVKKRLSVDSSNDGSITKDLD IKQDSGSMHDAFEYNHNGRSNRESDGDDDDDNDDETDTDDELGVGDIVFDTDDFKFDYEK QEKDNLGAGSKKSQETGAEPSDDNGVGRSNRPIDSDRIKQKSDVKDIFQEKMSLESKKNN IKKDLKVLNEIAATAKPSRYRVAPQWAQKWKPTVKALQNVDIKDFKIDASFTNIIPDDDL TKSVQDWVYATILSIQPDQRQFIEMEMKFGIIVEGSDTSRVNPPVFSQSVFTDPDAHLTP DIDERVFVELNKFIKGVSELNENTGKFNIIESQTTDSLYRVGISTQRPRFLRMSRDVKTG RIGQFIEKRHVSQLLLYSPKDSYDVKISVNLELPVPDNDPPEKYKDHTPVSSRSKDRISY IHNDSCTRIDITKVENHNQGIKQKTTEHTHEVELEVNTPALLNAFENITQDSKGYASIIR TFLNNGTIVRRKLTTLSFEIFEGQKKV*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/SAKL/SAKL0A03520p