SACE0P09680g


YPR161C SGV1, Cyclin (Bur2p)-dependent protein kinase that functions in transcriptional regulation; phosphorylates the carboxy-terminal domain of Rpo21p and the C-terminal repeat domain of Spt5p; regulated by Cak1p

Genomic environment map

Element type: CDS
Element length: 1974 nucleotides,
on anti-sense strand of
Sace0P: complement(864445..866418).
Other names:
SGV1
YPR161C
Coding sequence: 658 codons.
Database cross references:
EMBL: AAB59314.1
EMBL: AAB68058.1
EMBL: BAA14347.1

Computed results  

None available yet


Homologs and Orthologs

Homologs in protein family: GL3M4606
Orthologs: strict determination not possible; homologs must be refined manually

Protein SACE0P09680p  


*GO_function: ATP binding; cyclin-dependent protein kinase activity [PMID 10982824]; kinase activity; nucleotide binding; protein kinase activity; protein serine/threonine kinase activity; RNA polymerase II carboxy-terminal domain kinase activity; transferase activity;

Protein domain map

Protein length: 657 amino acids
Protein family: GL3M4606
Database cross references:
HSSP: 1BI8
InterPro: IPR000719
InterPro: IPR002290
InterPro: IPR008271
SGD: S000006365
UniProtKB/Swiss-Prot: P23293

Phylogeny  

PhylomeDB:SACE0P09680g

Computed results for SACE0P09680p  

None available yet

Gene Ontology terms  

None available yet

Sequence data  


Nucleotide sequence    

>SACE0P09680g.nt
ATGAGTGATAATGGTTCCCCCGCGGTTCTTCCAAAAACCGAATTTAATAAATACAAAATC
GGCAAAGTGAAGAGTACACCAGCCATCCAGCGAGATGCGAAGACTAACTTAACATACATC
AAACTAAGAAAAAGAAGTAGTGAGAAAGTTTACGGGTGTACAGTTTTCCAGAATCATTAT
CGTGAGGATGAAAAATTAGGACAAGGAACATTTGGTGAGGTTTATAAGGGAATTCATTTA
GAGACTCAAAGACAAGTGGCAATGAAAAAAATTATAGTTAGCGTTGAAAAAGATCTGTTT
CCTATAACTGCACAACGAGAAATTACTATTTTAAAGCGTTTAAACCACAAAAATATTATT
AAACTAATCGAAATGGTGTATGACCATTCACCGGATATTACAAATGCGGCATCCAGCAAC
CTACATAAGTCATTCTACATGATCCTGCCGTATATGGTAGCAGATCTGTCGGGCGTTTTG
CATAATCCGAGAATCAACTTAGAGATGTGCGATATAAAGAATATGATGCTACAAATATTA
GAAGGCCTAAATTATATTCATTGTGCAAAATTCATGCATAGGGATATAAAGACAGCAAAT
ATTTTGATTGACCACAACGGTGTTTTAAAGCTTGCTGATTTTGGTTTAGCAAGATTATAT
TATGGCTGTCCTCCAAACTTAAAGTATCCTGGTGGTGCAGGTTCCGGCGCCAAATATACA
TCAGTAGTCGTAACGAGATGGTATAGAGCACCTGAGTTGGTGCTTGGTGATAAACAGTAT
ACAACAGCTGTTGATATATGGGGTGTCGGATGCGTTTTCGCAGAATTTTTTGAGAAAAAA
CCTATTTTACAGGGAAAAACGGATATTGATCAGGGACATGTTATTTTCAAACTACTTGGT
ACACCGACAGAAGAAGATTGGGCCGTGGCTAGATATTTGCCAGGTGCTGAACTAACAACA
ACTAATTACAAGCCAACGTTGAGGGAAAGATTTGGTAAATATCTAAGTGAAACAGGTCTA
GATTTTTTAGGACAGTTGTTAGCGTTAGATCCTTACAAGAGGTTGACCGCTATGTCTGCT
AAACACCATCCTTGGTTTAAAGAGGACCCTTTACCATCAGAGAAGATAACATTACCGACG
GAAGAAAGTCATGAAGCTGATATTAAGAGGTACAAGGAAGAAATGCACCAATCATTGTCC
CAAAGAGTACCTACTGCGCCAAGAGGTCATATAGTTGAAAAGGGTGAATCACCTGTCGTG
AAAAATCTTGGGGCGATCCCAAGAGGCCCCAAGAAAGATGACGCAAGTTTTTTGCCTCCA
TCAAAGAACGTATTGGCTAAGCCGCCTCCTTCGAAAATAAGAGAACTACATCAAAATCCT
AGACCGTATCATGTGAACAGCGGATATGCTAAAACTGCGATTCCACCGCCAGCAGCCCCT
GCAGGAGTTAATAGATACGGACCCAACAATAGTTCCAGAAATAATCGCTTCAGCGGCAAC
AGCACTGCACCCAACAACAGCAGGAATCCCGTAAATCGATTTCATCCTGAGACAAATGTC
AGCTCTAAATATAATAAAGTACCTTTGCCATTGGGGCCTCAGTCAAGATACCAGGGTAAT
TCAAATGAGTCCCGGTACAAAAACTCGCCAAATGACTCTAGATATCATAACCCTAGGTAC
GTGAACAAGCCGGAAACCAACTTCAATAGGCAACCACAGAAATATAGTCGCCAAGAATCC
AATGCGCCAATCAATAAAAATTATAATCCTTCAAACGGTTCTCGCAATATGGCTGGTGAT
CATCATCAAGGCTCGAGACCTTCTCATCCACAATTCCCAATCTCGCCCTCACAGGGGCAG
CATCAGCTTACGAGTAAACCAATAGAGAAAAAAAATGGAAGCTTTAAGGATGAAAGAGCG
AAACCAGATGAGTCTAAGGAGTTCCAAAATAGTGATATTGCAGATCTATATTAG

Coding sequence    

>SACE0P09680g.cds
ATGAGTGATAATGGTTCCCCCGCGGTTCTTCCAAAAACCGAATTTAATAAATACAAAATC
GGCAAAGTGAAGAGTACACCAGCCATCCAGCGAGATGCGAAGACTAACTTAACATACATC
AAACTAAGAAAAAGAAGTAGTGAGAAAGTTTACGGGTGTACAGTTTTCCAGAATCATTAT
CGTGAGGATGAAAAATTAGGACAAGGAACATTTGGTGAGGTTTATAAGGGAATTCATTTA
GAGACTCAAAGACAAGTGGCAATGAAAAAAATTATAGTTAGCGTTGAAAAAGATCTGTTT
CCTATAACTGCACAACGAGAAATTACTATTTTAAAGCGTTTAAACCACAAAAATATTATT
AAACTAATCGAAATGGTGTATGACCATTCACCGGATATTACAAATGCGGCATCCAGCAAC
CTACATAAGTCATTCTACATGATCCTGCCGTATATGGTAGCAGATCTGTCGGGCGTTTTG
CATAATCCGAGAATCAACTTAGAGATGTGCGATATAAAGAATATGATGCTACAAATATTA
GAAGGCCTAAATTATATTCATTGTGCAAAATTCATGCATAGGGATATAAAGACAGCAAAT
ATTTTGATTGACCACAACGGTGTTTTAAAGCTTGCTGATTTTGGTTTAGCAAGATTATAT
TATGGCTGTCCTCCAAACTTAAAGTATCCTGGTGGTGCAGGTTCCGGCGCCAAATATACA
TCAGTAGTCGTAACGAGATGGTATAGAGCACCTGAGTTGGTGCTTGGTGATAAACAGTAT
ACAACAGCTGTTGATATATGGGGTGTCGGATGCGTTTTCGCAGAATTTTTTGAGAAAAAA
CCTATTTTACAGGGAAAAACGGATATTGATCAGGGACATGTTATTTTCAAACTACTTGGT
ACACCGACAGAAGAAGATTGGGCCGTGGCTAGATATTTGCCAGGTGCTGAACTAACAACA
ACTAATTACAAGCCAACGTTGAGGGAAAGATTTGGTAAATATCTAAGTGAAACAGGTCTA
GATTTTTTAGGACAGTTGTTAGCGTTAGATCCTTACAAGAGGTTGACCGCTATGTCTGCT
AAACACCATCCTTGGTTTAAAGAGGACCCTTTACCATCAGAGAAGATAACATTACCGACG
GAAGAAAGTCATGAAGCTGATATTAAGAGGTACAAGGAAGAAATGCACCAATCATTGTCC
CAAAGAGTACCTACTGCGCCAAGAGGTCATATAGTTGAAAAGGGTGAATCACCTGTCGTG
AAAAATCTTGGGGCGATCCCAAGAGGCCCCAAGAAAGATGACGCAAGTTTTTTGCCTCCA
TCAAAGAACGTATTGGCTAAGCCGCCTCCTTCGAAAATAAGAGAACTACATCAAAATCCT
AGACCGTATCATGTGAACAGCGGATATGCTAAAACTGCGATTCCACCGCCAGCAGCCCCT
GCAGGAGTTAATAGATACGGACCCAACAATAGTTCCAGAAATAATCGCTTCAGCGGCAAC
AGCACTGCACCCAACAACAGCAGGAATCCCGTAAATCGATTTCATCCTGAGACAAATGTC
AGCTCTAAATATAATAAAGTACCTTTGCCATTGGGGCCTCAGTCAAGATACCAGGGTAAT
TCAAATGAGTCCCGGTACAAAAACTCGCCAAATGACTCTAGATATCATAACCCTAGGTAC
GTGAACAAGCCGGAAACCAACTTCAATAGGCAACCACAGAAATATAGTCGCCAAGAATCC
AATGCGCCAATCAATAAAAATTATAATCCTTCAAACGGTTCTCGCAATATGGCTGGTGAT
CATCATCAAGGCTCGAGACCTTCTCATCCACAATTCCCAATCTCGCCCTCACAGGGGCAG
CATCAGCTTACGAGTAAACCAATAGAGAAAAAAAATGGAAGCTTTAAGGATGAAAGAGCG
AAACCAGATGAGTCTAAGGAGTTCCAAAATAGTGATATTGCAGATCTATATTAG

Predicted translation product    

>SACE0P09680g.aa
MSDNGSPAVLPKTEFNKYKIGKVKSTPAIQRDAKTNLTYIKLRKRSSEKVYGCTVFQNHY
REDEKLGQGTFGEVYKGIHLETQRQVAMKKIIVSVEKDLFPITAQREITILKRLNHKNII
KLIEMVYDHSPDITNAASSNLHKSFYMILPYMVADLSGVLHNPRINLEMCDIKNMMLQIL
EGLNYIHCAKFMHRDIKTANILIDHNGVLKLADFGLARLYYGCPPNLKYPGGAGSGAKYT
SVVVTRWYRAPELVLGDKQYTTAVDIWGVGCVFAEFFEKKPILQGKTDIDQGHVIFKLLG
TPTEEDWAVARYLPGAELTTTNYKPTLRERFGKYLSETGLDFLGQLLALDPYKRLTAMSA
KHHPWFKEDPLPSEKITLPTEESHEADIKRYKEEMHQSLSQRVPTAPRGHIVEKGESPVV
KNLGAIPRGPKKDDASFLPPSKNVLAKPPPSKIRELHQNPRPYHVNSGYAKTAIPPPAAP
AGVNRYGPNNSSRNNRFSGNSTAPNNSRNPVNRFHPETNVSSKYNKVPLPLGPQSRYQGN
SNESRYKNSPNDSRYHNPRYVNKPETNFNRQPQKYSRQESNAPINKNYNPSNGSRNMAGD
HHQGSRPSHPQFPISPSQGQHQLTSKPIEKKNGSFKDERAKPDESKEFQNSDIADLY*




Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites