SACE0P00352g

YPL270W MDL2, Mitochondrial inner membrane half- type ATP- binding cassette (ABC) transporter, required for respiratory growth at high temperature; similar to human TAP1 and TAP2 implicated in bare lymphocyte syndrome and Wegener-like granulomatosis;Mitochondrial inner membrane half-type ATP-binding cassette (ABC) transporter, required for respiratory growth at high temperature; similar to human TAP1 and TAP2 implicated in bare lymphocyte syndrome and Wegener-like granulomatosis

Genomic environment map

Element type: CDS
Element length: 2322 nucleotides,
on sense strand of
Sace0P: 30482..32803.
Other names:
MDL2
YPL270W
Coding sequence: 774 codons.

Database cross references:
ArrayExpress: P33311
CYGD: YPL270w
EMBL: AAA20682.1
EMBL: AAT93160.1
EMBL: AY693141
EMBL: BK006949
EMBL: CAA98006.1
EMBL: L16959
EMBL: Z73626
GeneID: 855858
HOGENOM: HBG758042
NMPDR: fig|4932.3.peg.6177

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3C0060
Consensus family of 46 members, sczltkgdpy (4 4 4 4 4 4 4 4 8 6)
46-member family, phyletic pattern sczltkgd-py, profile (4 4 4 4 4 4 4 4 0 8 6)
Proteins: SACE0K00440p SACE0L11945p SACE0M10274p SACE0P00352p CAGL0A01133p CAGL0E00385p CAGL0K00363p CAGL0M13739p ZYRO0D07106p ZYRO0F00396p ZYRO0F17050p ZYRO0G02244p SAKL0A10208p SAKL0C02244p SAKL0E00748p SAKL0H00968p KLTH0B01100p KLTH0B09482p KLTH0C11616p KLTH0F02024p KLLA0A10131p KLLA0B14256p KLLA0C01991p KLLA0D00748p ERGO0C05280p ERGO0F15840p ERGO0F21802p ERGO0G00880p DEHA2B03894p DEHA2B07172p DEHA2E23760p DEHA2F17226p PISO0A08030p PISO0B08097p PISO0I06388p PISO0J08193p PISO0M08064p PISO0M12134p PISO0N08219p PISO0N12443p YALI0A11473p YALI0B12188p YALI0E00880p YALI0E05973p YALI0E08030p YALI0F20174p
Search in: Génolevures Google

Homologs in protein family: GL3C0060
Orthologs: strict determination not possible; homologs must be refined manually

Protein SACE0P00352p

Protein domain map

Protein length: 773 amino acids
Protein family: GL3C0060

Database cross references:
DIP: DIP-4226N
GermOnline: YPL270W
HSSP: 1MT0
InterPro: IPR001140
InterPro: IPR003439
InterPro: IPR003593
InterPro: IPR005293
InterPro: IPR011527
InterPro: IPR017871
InterPro: IPR017940
KEGG: sce:YPL270W
NextBio: 980469
PIR: S65303
PROSITE: PS00211
PROSITE: PS50893
PROSITE: PS50929
Pfam: PF00005
Pfam: PF00664
RefSeq: NP_015053.2
SGD: S000006191
SMART: SM00382
SMR: P33311
TIGRFAMs: TIGR00958
UniProtKB/Swiss-Prot: P33311
UniProtKB: MDL2_YEAST

Phylogeny

PhylomeDB:SACE0P00352g

Computed results for SACE0P00352p

None available yet

Gene Ontology terms

Sequence data

>SACE0P00352g.nt
ATGTTGAATGGTCGTTTACCACTTTTGCGGCTGGGCATATGCAGAAACATGCTGTCCCGT
CCCCGACTGGCTAAACTGCCATCTATAAGGTTTCGGTCTTTGGTCACCCCTTCTTCATCG
CAGCTCATTCCTCTCAGTCGGTTGTGTTTAAGGTCACCTGCAGTTGGAAAATCACTAATT
TTACAAAGTTTTAGATGTAATTCATCCAAAACAGTTCCAGAAACTTCTCTGCCTTCAGCC
TCTCCCATATCTAAAGGATCAGCAAGGTCGGCACATGCAAAGGAGCAATCTAAAACTGAT
GACTATAAAGATATAATAAGGTTATTTATGTTGGCGAAACGGGATTGGAAACTGCTTCTT
ACAGCCATACTTCTTTTAACCATATCATGTTCCATAGGCATGTCTATTCCTAAAGTCATA
GGTATTGTCCTTGACACACTTAAGACGTCATCTGGATCAGATTTTTTTGATTTGAAGATA
CCGATTTTTTCTTTGCCTTTATATGAGTTTCTTTCCTTTTTTACTGTTGCTTTACTGATT
GGTTGTGCTGCTAATTTTGGTAGATTTATATTATTGAGGATACTAAGTGAGCGTGTTGTT
GCACGCCTAAGGGCAAATGTCATTAAAAAAACGCTTCATCAAGACGCAGAATTCTTCGAC
AACCATAAAGTTGGGGATTTAATTTCTCGTTTAGGATCTGATGCTTATGTTGTTTCAAGA
TCAATGACCCAGAAGGTCTCGGATGGGGTCAAAGCCCTAATTTGTGGGGTTGTTGGCGTG
GGGATGATGTGTTCTTTGTCACCTCAACTATCAATATTGTTACTATTCTTCACTCCACCT
GTTCTTTTTAGTGCCTCAGTGTTCGGGAAGCAAATTAGAAACACCTCTAAAGACCTTCAA
GAAGCTACTGGTCAATTGACTAGAGTCGCTGAAGAACAACTCTCTGGTATCAAGACGGTT
CAGTCGTTTGTTGCTGAAGGTAATGAATTGTCTAGGTATAACGTTGCAATTAGAGATATT
TTTCAGGTGGGAAAAACTGCGGCATTTACAAACGCAAAGTTTTTTACTACAACTAGTCTC
TTAGGTGACCTAAGTTTTTTAACCGTCCTTGCGTATGGCTCCTATCTTGTTTTACAATCA
CAGCTCTCCATTGGTGATCTGACTGCATTTATGCTGTACACAGAATATACGGGGAATGCG
GTATTCGGCCTTTCTACCTTCTATTCGGAAATTATGCAGGGTGCTGGGGCCGCTTCCAGG
TTGTTTGAATTAACAGATAGGAAACCTTCCATTTCACCGACTGTGGGACACAAGTATAAA
CCAGATCGTGGTGTTATCGAATTTAAAGATGTTTCATTTAGCTACCCTACAAGGCCTTCT
GTTCAAATATTCAAGAATTTAAATTTTAAAATTGCGCCAGGATCGAGTGTTTGTATTGTG
GGCCCTTCAGGTCGTGGTAAATCTACAATTGCACTCTTACTGCTAAGATATTATAATCCC
ACTACTGGGACTATTACGATAGATAACCAAGATATCTCTAAATTGAATTGTAAATCCCTA
AGAAGGCATATTGGTATCGTTCAGCAAGAGCCGGTACTGATGTCAGGTACTATTAGGGAT
AATATCACTTATGGGTTGACATATACCCCAACAAAGGAAGAAATCAGGTCAGTAGCAAAG
CAGTGCTTTTGCCATAACTTTATCACAAAATTTCCGAACACATACGATACGGTAATTGGT
CCTCACGGCACCTTACTAAGTGGAGGACAAAAGCAGCGTATTGCGATTGCAAGGGCTCTA
ATCAAAAAGCCAACTATTTTGATTCTTGATGAAGCTACATCAGCTTTAGATGTTGAAAGT
GAAGGAGCCATTAACTATACGTTTGGTCAACTAATGAAATCAAAATCGATGACTATTGTT
AGCATCGCGCACAGGCTAAGTACGATCAGAAGATCAGAGAATGTTATTGTCCTTGGCCAT
GATGGATCAGTGGTAGAAATGGGCAAATTCAAAGAATTGTATGCGAATCCAACAAGTGCT
TTATCGCAATTACTTAATGAGAAAGCGGCTCCTGGGCCATCTGACCAACAACTGCAAATA
GAGAAGGTCATCGAAAAGGAAGATTTGAATGAGAGTAAGGAGCATGATGACCAGAAAAAG
GACGATAATGACGATAATGATAATAATCATGATAACGACAGCAATAACCAGTCTCCAGAG
ACGAAAGACAATAATTCAGATGATATTGAAAAATCTGTCGAACATCTCCTGAAAGACGCG
GCAAAGGAGGCTAATCCAATTAAGATCACACCACAACCGTGA

>SACE0P00352g.cds
ATGTTGAATGGTCGTTTACCACTTTTGCGGCTGGGCATATGCAGAAACATGCTGTCCCGT
CCCCGACTGGCTAAACTGCCATCTATAAGGTTTCGGTCTTTGGTCACCCCTTCTTCATCG
CAGCTCATTCCTCTCAGTCGGTTGTGTTTAAGGTCACCTGCAGTTGGAAAATCACTAATT
TTACAAAGTTTTAGATGTAATTCATCCAAAACAGTTCCAGAAACTTCTCTGCCTTCAGCC
TCTCCCATATCTAAAGGATCAGCAAGGTCGGCACATGCAAAGGAGCAATCTAAAACTGAT
GACTATAAAGATATAATAAGGTTATTTATGTTGGCGAAACGGGATTGGAAACTGCTTCTT
ACAGCCATACTTCTTTTAACCATATCATGTTCCATAGGCATGTCTATTCCTAAAGTCATA
GGTATTGTCCTTGACACACTTAAGACGTCATCTGGATCAGATTTTTTTGATTTGAAGATA
CCGATTTTTTCTTTGCCTTTATATGAGTTTCTTTCCTTTTTTACTGTTGCTTTACTGATT
GGTTGTGCTGCTAATTTTGGTAGATTTATATTATTGAGGATACTAAGTGAGCGTGTTGTT
GCACGCCTAAGGGCAAATGTCATTAAAAAAACGCTTCATCAAGACGCAGAATTCTTCGAC
AACCATAAAGTTGGGGATTTAATTTCTCGTTTAGGATCTGATGCTTATGTTGTTTCAAGA
TCAATGACCCAGAAGGTCTCGGATGGGGTCAAAGCCCTAATTTGTGGGGTTGTTGGCGTG
GGGATGATGTGTTCTTTGTCACCTCAACTATCAATATTGTTACTATTCTTCACTCCACCT
GTTCTTTTTAGTGCCTCAGTGTTCGGGAAGCAAATTAGAAACACCTCTAAAGACCTTCAA
GAAGCTACTGGTCAATTGACTAGAGTCGCTGAAGAACAACTCTCTGGTATCAAGACGGTT
CAGTCGTTTGTTGCTGAAGGTAATGAATTGTCTAGGTATAACGTTGCAATTAGAGATATT
TTTCAGGTGGGAAAAACTGCGGCATTTACAAACGCAAAGTTTTTTACTACAACTAGTCTC
TTAGGTGACCTAAGTTTTTTAACCGTCCTTGCGTATGGCTCCTATCTTGTTTTACAATCA
CAGCTCTCCATTGGTGATCTGACTGCATTTATGCTGTACACAGAATATACGGGGAATGCG
GTATTCGGCCTTTCTACCTTCTATTCGGAAATTATGCAGGGTGCTGGGGCCGCTTCCAGG
TTGTTTGAATTAACAGATAGGAAACCTTCCATTTCACCGACTGTGGGACACAAGTATAAA
CCAGATCGTGGTGTTATCGAATTTAAAGATGTTTCATTTAGCTACCCTACAAGGCCTTCT
GTTCAAATATTCAAGAATTTAAATTTTAAAATTGCGCCAGGATCGAGTGTTTGTATTGTG
GGCCCTTCAGGTCGTGGTAAATCTACAATTGCACTCTTACTGCTAAGATATTATAATCCC
ACTACTGGGACTATTACGATAGATAACCAAGATATCTCTAAATTGAATTGTAAATCCCTA
AGAAGGCATATTGGTATCGTTCAGCAAGAGCCGGTACTGATGTCAGGTACTATTAGGGAT
AATATCACTTATGGGTTGACATATACCCCAACAAAGGAAGAAATCAGGTCAGTAGCAAAG
CAGTGCTTTTGCCATAACTTTATCACAAAATTTCCGAACACATACGATACGGTAATTGGT
CCTCACGGCACCTTACTAAGTGGAGGACAAAAGCAGCGTATTGCGATTGCAAGGGCTCTA
ATCAAAAAGCCAACTATTTTGATTCTTGATGAAGCTACATCAGCTTTAGATGTTGAAAGT
GAAGGAGCCATTAACTATACGTTTGGTCAACTAATGAAATCAAAATCGATGACTATTGTT
AGCATCGCGCACAGGCTAAGTACGATCAGAAGATCAGAGAATGTTATTGTCCTTGGCCAT
GATGGATCAGTGGTAGAAATGGGCAAATTCAAAGAATTGTATGCGAATCCAACAAGTGCT
TTATCGCAATTACTTAATGAGAAAGCGGCTCCTGGGCCATCTGACCAACAACTGCAAATA
GAGAAGGTCATCGAAAAGGAAGATTTGAATGAGAGTAAGGAGCATGATGACCAGAAAAAG
GACGATAATGACGATAATGATAATAATCATGATAACGACAGCAATAACCAGTCTCCAGAG
ACGAAAGACAATAATTCAGATGATATTGAAAAATCTGTCGAACATCTCCTGAAAGACGCG
GCAAAGGAGGCTAATCCAATTAAGATCACACCACAACCGTGA

>SACE0P00352g.aa
MLNGRLPLLRLGICRNMLSRPRLAKLPSIRFRSLVTPSSSQLIPLSRLCLRSPAVGKSLI
LQSFRCNSSKTVPETSLPSASPISKGSARSAHAKEQSKTDDYKDIIRLFMLAKRDWKLLL
TAILLLTISCSIGMSIPKVIGIVLDTLKTSSGSDFFDLKIPIFSLPLYEFLSFFTVALLI
GCAANFGRFILLRILSERVVARLRANVIKKTLHQDAEFFDNHKVGDLISRLGSDAYVVSR
SMTQKVSDGVKALICGVVGVGMMCSLSPQLSILLLFFTPPVLFSASVFGKQIRNTSKDLQ
EATGQLTRVAEEQLSGIKTVQSFVAEGNELSRYNVAIRDIFQVGKTAAFTNAKFFTTTSL
LGDLSFLTVLAYGSYLVLQSQLSIGDLTAFMLYTEYTGNAVFGLSTFYSEIMQGAGAASR
LFELTDRKPSISPTVGHKYKPDRGVIEFKDVSFSYPTRPSVQIFKNLNFKIAPGSSVCIV
GPSGRGKSTIALLLLRYYNPTTGTITIDNQDISKLNCKSLRRHIGIVQQEPVLMSGTIRD
NITYGLTYTPTKEEIRSVAKQCFCHNFITKFPNTYDTVIGPHGTLLSGGQKQRIAIARAL
IKKPTILILDEATSALDVESEGAINYTFGQLMKSKSMTIVSIAHRLSTIRRSENVIVLGH
DGSVVEMGKFKELYANPTSALSQLLNEKAAPGPSDQQLQIEKVIEKEDLNESKEHDDQKK
DDNDDNDNNHDNDSNNQSPETKDNNSDDIEKSVEHLLKDAAKEANPIKITPQP*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

SACE0P00352g

SACE0P00352g

Genomic environment map

Computed results

Homologs and Orthologs

Protein SACE0P00352p

Protein domain map

Phylogeny

Computed results for SACE0P00352p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes