SACE0O01716g


tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs

Genomic environment map

Element type: CDS
Element length: 882 nucleotides,
on sense strand of
Sace0O: 142815..143696.
Other names:
TRM10
YOL093W
Coding sequence: 294 codons.
Database cross references:
ArrayExpress: Q12400
CYGD: YOL093w
EMBL: CAA58186.1
EMBL: CAA99105.1
EMBL: X83121
EMBL: Z74835
Ensembl: YOL093W
GeneID: 854060
GenomeReviews: Y13140_GR
HOGENOM: Q12400
NMPDR: fig|4932.3.peg.5637

Computed results  

None available yet

Homologs and Orthologs

Homologs in protein families: GL3R1757 GL3R1757.N1
Orthologs: strict determination not possible; homologs must be refined manually

Protein SACE0O01716p  


Protein domain map

Protein length: 293 amino acids
Protein family: GL3R1757
Database cross references:
DIP: DIP:4737N
GermOnline: YOL093W
IntAct: Q12400
InterPro: IPR007356
InterPro: IPR016009
InterPro: IPR016653
KEGG: sce:YOL093W
LinkHub: Q12400
PANTHER: PTHR13563
PIR: S57376
PIRSF: PIRSF016323
Pfam: PF01746
RefSeq: NP_014548.1
SGD: S000005453
UniProtKB/Swiss-Prot: Q12400
UniprotKB: TRM10_YEAST

Computed results for SACE0O01716p  

Blastp Genolevures
Blastp Uniprot

Gene Ontology terms  

GO:0042802 identical protein binding
GO:0030488 tRNA methylation
GO:0016423 tRNA (guanine) methyltransferase activity
GO:0005737 cytoplasm
GO:0005634 nucleus

Sequence data  


Nucleotide sequence    

>SACE0O01716g.nt
ATCTTCTAGGTTGGAGGCTAGTAACATTTTCTTCACTATTAGAGGGTGAGGAGAATCAAC
AATTTTGAAGACATTGTCTGCGTTCACTAAACCGTGTCCTGCTACTGTACTTTGTAGATT
GTTTATGGCCTGTCTCATGTCACCCTCCGCTGTAAAAATGATTGCTTCTAACCCATCATT
TGTATACTTAACATCCTCTAGCTTTATGATTTGTAAAAGACGTTTTAGAACGTCTTCATC
GGATAGTTTAGAATACCTCAAAATCGCACATCTACTTTGCAGCGGCTCAATGATCTTGTT
TGATTGATTACAAGCAAATGCAAACCTTGTAGAGTTCGAATATAGCTCCATGGTCCTTCT
CAACGCTTGCTGAGCACCAGCAGTCATGGAATCCGCCTCATCAAGAATAACGATTTTATG
TTTCCCTGGAGGCAAATGTAGTTTCTTCTGGGCAAAATGTTTTATTTGGTTTCTGACGAC
ATCAATACCTCTGTCATCTGAAGCGTTCAACTCTAAAACACCGTCAGCATAAGAGCGGCC
AAGGAGCTCGTGAGCAAGGCAATGTACCGAAGTGGTCTTACCTATACCTGGCATACCTGA
TATGATCATATGGGGCATGTTACCATCTTTAGCGATTTGCTGAAGTCTATCAATGGTCTC
TTTATTACCGACTATATCAGATAAAACTTGGGGACGGTATTTCTCAACCCATGGAAGTTG
CAAAGATAAAGTTTTGGACATTATAAGGGACTTTTTATATCTTCTGGGAAGCTCTGCAAT
GTTATAATAGATCCAATCAGATTTATAAATGCTACTATTTTACAGTATTTAAAATATGTG
GTTGGTTTTCCCACCTTTTTGTCAAGAAAAAACGCGTTTAATCTAACAGTGTGATGTGGT
AATGAAAAATTTTCATTGTCTTTAAGAGAGATGGTGATGTTTAATATAGCGTAAAGCTTT
CAAGGTAAATAATTAAGTGTCAATCTGCAGGCAAAACAACATGTCCAATGATGAGATAAA
CCAGAACGAGGAAAAGGTGAAAAGAACACCACCTTTACCGCCTGTGCCAGAAGGCATGTC
TAAAAAGCAATGGAAAAAAATGTGTAAAAGACAGAGATGGGAGGAGAATAAAGCCAAATA
CAATGCGGAACGCCGTGTAAAGAAGAAGAGACTTCGCCATGAAAGAAGTGCGAAGATTCA
AGAATACATTGACAGGGGAGAAGAGGTCCCGCAGGAATTGATTAGAGAGCCTCGTATCAA
TGTGAATCAGACTGATTCTGGGATAGAGATCATACTTGACTGTTCTTTTGATGAGTTAAT
GAACGACAAGGAAATAGTAAGCTTGTCTAACCAGGTCACCAGGGCATACTCCGCGAATAG
AAGGGCGAACCATTTTGCAGAAATAAAGGTGGCCCCATTCGACAAAAGACTAAAGCAAAG
GTTTGAAACTACTCTGAAAAATACCAATTATGAAAACTGGAACCATTTTAAATTCCTACC
AGACGACAAAATCATGTTTGGAGATGAGCATATAAGTAAGGACAAAATAGTGTATTTAAC
GGCCGATACAGAGGAAAAGCTGGAGAAGCTGGAACCCGGGATGCGATACATTGTTGGCGG
CATTGTAGACAAGAATCGTTATAAAGAATTGTGTCTGAAGAAGGCCCAAAAGATGGGCAT
TCCTACGCGAAGATTGCCCATTGACGAGTACATCAATCTCGAAGGCAGAAGAGTGTTGAC
GACAACGCACGTCGTGCAACTCATGCTGAAATACTTTGATGACCATAACTGGAAAAATGC
CTTTGAAAGCGTTTTACCACCCAGAAAGCTGGATGCGGAAGCAAAATCCGCAAGCTCTTC
GCCAGCTCCAAAGGACACATAGGCAGCCATCACTGTAGTATTATTAGTAACTGAATAGCA
AAATAGTAATAGTCTCCGTAGCTACAATAGGTGTATATTGATGTCAGAGATACGGGTTAA
ACATGCGCAACTGGTAGTAGTTCTTCAAAGGGTGTTTATGCTTATCATAGTACTTGGACA
TTAGCCGCCGAAACTGGCTCCACTCGAAATCTAAATGGCATTCCCTTTTTAATATTAACA
ACACCAATCTTAGTGTCCGAGAGGTCCAAATCTAATGTAGGGCCGTGGGAGGATACTTCT
TATTTCTCTTTGCTTATTTTGC

Coding sequence    

>SACE0O01716g.cds
ATGTCCAATGATGAGATAAACCAGAACGAGGAAAAGGTGAAAAGAACACCACCTTTACCG
CCTGTGCCAGAAGGCATGTCTAAAAAGCAATGGAAAAAAATGTGTAAAAGACAGAGATGG
GAGGAGAATAAAGCCAAATACAATGCGGAACGCCGTGTAAAGAAGAAGAGACTTCGCCAT
GAAAGAAGTGCGAAGATTCAAGAATACATTGACAGGGGAGAAGAGGTCCCGCAGGAATTG
ATTAGAGAGCCTCGTATCAATGTGAATCAGACTGATTCTGGGATAGAGATCATACTTGAC
TGTTCTTTTGATGAGTTAATGAACGACAAGGAAATAGTAAGCTTGTCTAACCAGGTCACC
AGGGCATACTCCGCGAATAGAAGGGCGAACCATTTTGCAGAAATAAAGGTGGCCCCATTC
GACAAAAGACTAAAGCAAAGGTTTGAAACTACTCTGAAAAATACCAATTATGAAAACTGG
AACCATTTTAAATTCCTACCAGACGACAAAATCATGTTTGGAGATGAGCATATAAGTAAG
GACAAAATAGTGTATTTAACGGCCGATACAGAGGAAAAGCTGGAGAAGCTGGAACCCGGG
ATGCGATACATTGTTGGCGGCATTGTAGACAAGAATCGTTATAAAGAATTGTGTCTGAAG
AAGGCCCAAAAGATGGGCATTCCTACGCGAAGATTGCCCATTGACGAGTACATCAATCTC
GAAGGCAGAAGAGTGTTGACGACAACGCACGTCGTGCAACTCATGCTGAAATACTTTGAT
GACCATAACTGGAAAAATGCCTTTGAAAGCGTTTTACCACCCAGAAAGCTGGATGCGGAA
GCAAAATCCGCAAGCTCTTCGCCAGCTCCAAAGGACACATAG

Predicted translation product    

>SACE0O01716g.aa
MSNDEINQNEEKVKRTPPLPPVPEGMSKKQWKKMCKRQRWEENKAKYNAERRVKKKRLRH
ERSAKIQEYIDRGEEVPQELIREPRINVNQTDSGIEIILDCSFDELMNDKEIVSLSNQVT
RAYSANRRANHFAEIKVAPFDKRLKQRFETTLKNTNYENWNHFKFLPDDKIMFGDEHISK
DKIVYLTADTEEKLEKLEPGMRYIVGGIVDKNRYKELCLKKAQKMGIPTRRLPIDEYINL
EGRRVLTTTHVVQLMLKYFDDHNWKNAFESVLPPRKLDAEAKSASSSPAPKDT*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites