SACE0L13925g


Putative nicotinamide N-methyltransferase, has a role in rDNA silencing and in lifespan determination

Genomic environment map

Element type: CDS
Element length: 786 nucleotides,
on sense strand of
Sace0L: 707362..708147.
Other names:
NNT1
YLR285W
Coding sequence: 262 codons.
Database cross references:
CYGD: YLR285w
EMBL: AAB67330.1
EMBL: AAT93057.1
EMBL: AY693038
EMBL: U17243
Ensembl: YLR285W
GeneID: 850991
GenomeReviews: Y13138_GR
HOGENOM: Q05874
NMPDR: fig|4932.3.peg.4402

Computed results  

None available yet

Homologs and Orthologs

Homologs in protein families: GL3R2372 GL3R2372.N1
Orthologs: strict determination not possible; homologs must be refined manually

Protein SACE0L13925p  


Protein domain map

Protein length: 261 amino acids
Protein family: GL3R2372
Database cross references:
DIP: DIP:2117N
GermOnline: YLR285W
KEGG: sce:YLR285W
LinkHub: Q05874
PIR: S50370
PeptideAtlas: Q05874
RefSeq: NP_013387.1
SGD: S000004275
UniProtKB/Swiss-Prot: Q05874
UniprotKB: NNT1_YEAST

Computed results for SACE0L13925p  

Blastp Genolevures
Blastp Uniprot

Gene Ontology terms  

GO:0006769 nicotinamide metabolic process
GO:0005737 cytoplasm
GO:0000183 chromatin silencing at rDNA

Sequence data  


Nucleotide sequence    

>SACE0L13925g.nt
GGGCAGGTATAGCCCTTTCACTTTCTCCCTCAATTCTTCTAAGACCTTTGCATTGAACGC
TTCAGCGTTTGAAGATGGCATGTTAAAATTCTTGCTTATAAATCCGTTCTCGCACATTAT
ATCGTACTTGAATGGTTTGTTGAACATGAGGCATTCATACGTCGTATTTGTGCCAAACTT
CAATGGCAAAGAGACCGTTGTACCACCTTCGGTAATTAGTCCTAAGTTAGCAAAGGGGTA
TAGCAAATAAACCTTGTCATTTATACTGTACACAATGTCACATAACGCTACCAGTGCCGC
GCTCAACCCTATTGCTGGTCCATTCAAACAGCAAATTAAAACTTTGGAATGCTTGATGAA
GGCATCAGTGACATAAACATTTCTAGCGACAAAATTTGACACCCACTTGCTTGTTTCCGA
AGGATATTTATTGGTATCATCCCCTTGGGCTTTTGCAATACCCTTGAAATCAGCACCACT
GGAAAAAAATCTACCACTGCTTTGTATAATTGTAAAATATACATCACGATTTCTGTCCGC
TAGTTCTAGTAACTCTCCTAAATAAATATAGTCTTCACCTTCTAGTGCATTCAAATTGTC
AGGGTTCATTAAGTGAATAATGAAGAATGGTCCTTCAATACGATAACTGATTTTCTCATT
TTGCCTAATTTCTTGCGACATATTGTTCTTCCTTCCTTTACTGTGCGAGCAATTTGTGCC
ATACACTCCAATTATCTATCCATATGTTCATCTTTCAGTTCTTATATATAGTGCTTCACT
TTTATTAACCGCTCTTGGGGTAAAAGAGAAACGGTCACTGCTACAGCCTTTCGGAATAAT
ATTTCTTATGCCCGTCGCCAATTTCAGATTCTTTCCTTCGTGCCGCATTTATTTTATTTT
TCAAAATGACGAGAAGTTAAAATCTAAAATCAGGAAAAAGAACAGTTGCAGATGACGAAA
TACTTCGAGCATTATCGCAATAAATAAGGCGTGTAAACGTATGTCAGATATAGAATCATT
GGGAGAGGCAGCAGGTTTATTTGAGGAGCCAGAGGATTTTCTTCCTCCTCCACCAAAACC
TCATTTTGCAGAATATCAAAGGTCACACATCACAAAAGAGTCCAAATCAGATGTTAAAGA
CATCAAACTCCGTCTCGTTGGAACGTCACCACTTTGGGGTCATCTCTTGTGGAATGCAGG
AATATACACCGCAAATCACTTGGATTCTCATCCAGAATTAATAAAGGGGAAGACTGTTTT
AGAATTGGGTGCTGCTGCTGCTTTACCTTCCGTTATTTGTGCTTTGAATGGGGCTCAAAT
GGTTGTTTCAACTGATTATCCAGATCCTGATTTAATGCAGAACATCGATTATAATATAAA
GTCTAACGTTCCTGAAGATTTTAATAATGTCAGTACGGAGGGTTATATTTGGGGAAACGA
TTATTCTCCATTGTTGGCACATATCGAAAAAATAGGTAACAATAATGGAAAGTTTGACTT
AATCATTTTAAGTGATTTAGTCTTCAATCATACGGAACATCACAAATTACTTCAAACAAC
AAAGGATTTATTAGCTGAGAAAGGTCAGGCGTTGGTAGTATTTTCACCGCATAGACCAAA
ATTGTTGGAGAAGGATTTAGAATTCTTCGAATTGGCTAAGAACGAGTTCCATTTGGTTCC
TCAGCTAATTGAAATGGTTAATTGGAAACCGATGTTTGACGAAGACGAGGAAACAATCGA
AGTCAGATCTCGTGTTTATGCGTACTATTTAACACATGAAAAGTAGTAAGTGGGCGGAAT
TGGCATTCTCAACAATCATTTTTATGTTTGTAAACCAGTGTCCTTTGATATGTAACAATT
AAATAAAATAAGTCATGATGGGGCACGAATTCGCAAAATGGTAGAAACACAGTAAATCGA
AGAAAATTAAATAATTCGTTATAGATATAAAGTAGTCGATTATAAAAACGTAAAAACATG
AAGGCAGGGTACCTTGACGAAATAAAAGAGAGGCGGTGAGATGAGGTGAAAAATAAAGAA
TATTGCAAAAAAAAATATTCGGACTCTATGAATCAATCTCTAATAA

Coding sequence    

>SACE0L13925g.cds
ATGTCAGATATAGAATCATTGGGAGAGGCAGCAGGTTTATTTGAGGAGCCAGAGGATTTT
CTTCCTCCTCCACCAAAACCTCATTTTGCAGAATATCAAAGGTCACACATCACAAAAGAG
TCCAAATCAGATGTTAAAGACATCAAACTCCGTCTCGTTGGAACGTCACCACTTTGGGGT
CATCTCTTGTGGAATGCAGGAATATACACCGCAAATCACTTGGATTCTCATCCAGAATTA
ATAAAGGGGAAGACTGTTTTAGAATTGGGTGCTGCTGCTGCTTTACCTTCCGTTATTTGT
GCTTTGAATGGGGCTCAAATGGTTGTTTCAACTGATTATCCAGATCCTGATTTAATGCAG
AACATCGATTATAATATAAAGTCTAACGTTCCTGAAGATTTTAATAATGTCAGTACGGAG
GGTTATATTTGGGGAAACGATTATTCTCCATTGTTGGCACATATCGAAAAAATAGGTAAC
AATAATGGAAAGTTTGACTTAATCATTTTAAGTGATTTAGTCTTCAATCATACGGAACAT
CACAAATTACTTCAAACAACAAAGGATTTATTAGCTGAGAAAGGTCAGGCGTTGGTAGTA
TTTTCACCGCATAGACCAAAATTGTTGGAGAAGGATTTAGAATTCTTCGAATTGGCTAAG
AACGAGTTCCATTTGGTTCCTCAGCTAATTGAAATGGTTAATTGGAAACCGATGTTTGAC
GAAGACGAGGAAACAATCGAAGTCAGATCTCGTGTTTATGCGTACTATTTAACACATGAA
AAGTAG

Predicted translation product    

>SACE0L13925g.aa
MSDIESLGEAAGLFEEPEDFLPPPPKPHFAEYQRSHITKESKSDVKDIKLRLVGTSPLWG
HLLWNAGIYTANHLDSHPELIKGKTVLELGAAAALPSVICALNGAQMVVSTDYPDPDLMQ
NIDYNIKSNVPEDFNNVSTEGYIWGNDYSPLLAHIEKIGNNNGKFDLIILSDLVFNHTEH
HKLLQTTKDLLAEKGQALVVFSPHRPKLLEKDLEFFELAKNEFHLVPQLIEMVNWKPMFD
EDEETIEVRSRVYAYYLTHEK*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites