SACE0E01650g

Glycogen branching enzyme, involved in glycogen accumulation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern

Genomic environment map

Element type: CDS
Element length: 2115 nucleotides,
on sense strand of
Sace0E: 133120..135234.
Other names:
GHA1
GLC3
YEL011W
Coding sequence: 705 codons.

Database cross references:
ArrayExpress: P32775
CYGD: YEL011w
EMBL: AAA34632.1
EMBL: AAB64488.1
EMBL: M76739
EMBL: U18530
Ensembl: YEL011W
GeneID: 856705
GenomeReviews: U00092_GR
HOGENOM: P32775
NMPDR: fig|4932.3.peg.1961

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3R2291
Robust family of 9 members, scrltkgdy (1 1 1 1 1 1 1 1 1)
9-member family, phyletic pattern sczltkgdy, profile (1 1 1 1 1 1 1 1 1)
Proteins: SACE0E01650p CAGL0M03377p ZYRO0E03828p SAKL0D10538p KLTH0H13794p KLLA0A11176p ERGO0E07282p DEHA2B01672p YALI0C06798p
Search in: Génolevures Google

Génolevures family GL3R2291.N1
Nine-SONS subgroup of a Robust family
9-member family, phyletic pattern sczltkgdy, profile (1 1 1 1 1 1 1 1 1)
Proteins: SACE0E01650p CAGL0M03377p ZYRO0E03828p SAKL0D10538p KLTH0H13794p KLLA0A11176p ERGO0E07282p DEHA2B01672p YALI0C06798p
Search in: Génolevures Google

Homologs in protein families: GL3R2291 GL3R2291.N1
Orthologs: strict determination not possible; homologs must be refined manually

Protein SACE0E01650p

Protein domain map

Protein length: 704 amino acids
Protein family: GL3R2291

Database cross references:
DIP: DIP:3873N
Gene3D: G3DSA:2.60.40.10
Gene3D: G3DSA:2.60.40.1180
Gene3D: G3DSA:3.20.20.80
GermOnline: YEL011W
HSSP: 1M7X
HSSP: P07762
IntAct: P32775
InterPro: IPR004193
InterPro: IPR006047
InterPro: IPR006048
InterPro: IPR013780
InterPro: IPR013781
InterPro: IPR013783
KEGG: sce:YEL011W
LinkHub: P32775
PIR: S50448
PeptideAtlas: P32775
Pfam: PF00128
Pfam: PF02806
Pfam: PF02922
RefSeq: NP_010905.1
SGD: S000000737
UniProtKB/Swiss-Prot: P32775
UniprotKB: GLGB_YEAST

Computed results for SACE0E01650p

Blastp Genolevures

Blastp Uniprot

Gene Ontology terms

GO:0005978	glycogen biosynthetic process
GO:0005737	cytoplasm
GO:0003844	1,4-alpha-glucan branching enzyme activity

Sequence data

>SACE0E01650g.nt
AACATTGATATCGCATCGGGGTCCATATGTTTGGACGTAATTAACTCTACATGGTCGCCT
TTATATGATCTGATAAATATAGTGGAGTGGATGATACCAGGTTTATTAAAGGAGCCTAAT
GGTAGCGATCCCTTGAATAACGAAGCTGCCACATTGCAATTACGAGATAAAAAACTGTAT
GAGGAAAAAATCAAAGAGTATATAGACAAGTATGCTACAAAGGAAAAGTACCAACAAATG
TTTGGCGGAGATAATGATAGCGATGACAGTGATAGCGGCGGTGATTTACAAGAAGAGGAC
AGTGATTCTGATGAAGATATGGATGGCACTGGTGTTTCCAGTGGCGATGATAGCGTAGAT
GAGTTAAGCGAGGATCTAAGTGACATAGATGTCAGTGATGACGATGACTACGACGAAGTC
GCAAATCAATAATTTCGAGCACACACATATATATATATATATATATATGTATGTATGTAT
AAGTATATATGATGGCATACTATACCACACGTACGACTATAATTACAAACAACTATCAAG
CAACTACAAGGATCTCTGTGGGCTAGTGGCCTGCGGGCTCAATTTTGCTCTTGTTCCTGA
ACGGTGAATTCTGTAGTCTGTCATCCAGGGGAAGGGCAGGGCACTCATCAACAATGTGAT
AGTCAGAAAGCAATAATGTTTTGTATTCTGATGAGCTTTCACTATCTCTTCCGCAATACC
CCTTTTTGCCTATATTACGGCATCATCTTTCCCCGCGTTCTCGTGGGGGCCAAATAAGCT
TTGTCCAAGGGGCTGTTGCAACGGTAAAGGTAGTCGAGCCAAGTGACACCAGCAAACAAG
GAAACAAGGAAGCAAGGAAGGCTTTCCATTTTCCAATAACGACATGAGTCTATCTATGGT
GTATAAAAGTGGCAGGCTTTTCCTACATTTTTTTTCCCTGATAACTTCCTGTTACTATTT
AAGAACACCAAACCAAGTATAAAGAACCGTCAAGAATAAAATGTACAACATTCCAGATAA
TGTCAAAGGGGCTGTAGAATTTGATCCATGGTTGAAACCGTTTGCCGATGTACTTTCTGA
AAGAAGATACCTAGCTGACAAGTGGTTGTACGACATAACTCATGCTACGCCTGATGGTTC
GTATCAGTCACTCAGTAAGTTTGCTAGAGATTCATACAAGTCATATGGGTTGCATGCCAA
TCCGGAAACCAAAGAAATCACTTACAAAGAGTGGGCACCCAATGCGGAACGTGCATTTCT
AGTGGGAGATTTCAATAACTGGGATACCACATCTCATGAGCTCAAGAACAAGGACGAATT
TGGAAATTTTACAATCACACTTCATCCTTTACCTAACGGCGATTTCGCCATCCCTCATGA
TTCGAAGATTAAAGTCATGTTTATTTTGCCAGATGGTTCCAAGATCTTTCGTTTACCTGC
GTGGATCACAAGGGCTACACAGCCTTCTAAGGAAACTTCTAAACAGTTCGGGCCCGCATA
TGAAGGTAGGTTTTGGAATCCAGAGAACCCCTACAAATTTGTACATCCAAGGCCAAAGTT
TAGTGAATCTGTAGATTCCTTAAGGATTTATGAAGCCCACGTCGGTATTTCGAGTCCAGA
ACCAAAGATAACCACATATAAAGAATTTACTGAGAAGGTCTTACCCAGAATCAAATATCT
TGGCTACGATGCAATTCAATTAATGGCTATTATGGAACATGCTTATTATGCATCATTTGG
CTACCAAGTGACCAATTTTTTTGCGGCGAGCTCCCGTTTCGGCACCCCTGAGGAATTAAA
GGAGCTGATTGATACTGCACATTCTATGGGCATCCTAGTTTTATTGGATGTAGTTCATAG
CCATGCTTCTAAAAACGTCGAGGATGGGTTGAACATGTTTGACGGTTCTGATCATCAGTA
TTTCCATTCTATAAGCTCCGGTAGGGGTGAGCATCCGCTGTGGGATTCCCGTCTTTTTAA
TTACGGAAAATTTGAAGTGCAGCGATTCTTATTAGCAAACCTGGCATTTTATGTTGACGT
TTATCAGTTTGATGGGTTTAGATTCGATGGTGTCACATCAATGTTATACGTTCATCATGG
TGTTGGTGCCGGTGGGTCTTTTAGCGGTGACTATAACGAATATCTTTCTCGTGACAGGTC
CTTCGTCGATCATGAAGCCTTAGCTTATTTAATGTTAGCCAATGATTTGGTTCACGAAAT
GTTGCCAAATCTGGCTGTAACTGTTGCAGAAGATGTCTCTGGTTATCCAACTTTATGTTT
ACCCCGCTCCATAGGTGGTACTGGTTTCGACTACAGATTAGCAATGGCTTTGCCTGATAT
GTGGATCAAACTAATCAAGGAGAAGAAAGATGATGAATGGGAGATGGGAAGTATTGTATA
CACTTTAACTAATAGACGATATGGTGAAAAAGTGGTTGCTTATTGTGAGTCGCACGACCA
AGCTTTAGTTGGTGATAAGACATTAGCGTTTTGGTTGATGGATGCCGCTATGTACACCGA
TATGACTGTATTGAAGGAACCATCCATCGTTATTGACCGTGGTATTGCTCTACACAAGAT
GATTAGGCTGATCACTCACTCGCTGGGAGGCGAGGCTTATTTGAACTTCGAAGGTAATGA
GTTCGGTCATCCAGAATGGTTGGATTTCCCTAATGTTAACAATGGCGATAGCTACAAGTA
TGCTCGTAGGCAGTTTAATTTGGCTGATGATCCCTTACTGCGTTACCAGAATTTAAATGA
GTTTGATAGATCAATGCAATTATGTGAGAAAAGGCATAAGTGGCTGAACACGAAACAGGC
TTATGTTTCATTAAAACATGAAGGTGACAAAATGATTGTGTTTGAAAGAAATAATCTGTT
GTTTATTTTCAACTTCCATCCTACAAACAGCTACAGCGATTATAGAGTTGGTGTCGAAAA
AGCTGGTACTTATCACATCGTGTTGAACTCAGATCGTGCTGAATTTGGTGGACATAACAG
AATCAACGAAAGTTCCGAATTCTTTACCACCGATTTGGAATGGAACAACAGGAAGAACTT
CCTCCAAGTTTATATTCCTAGTAGAGTCGCTTTGGTGCTTGCCTTAAAAGAATGAACTCT
ATACTATATTGCTTACTGAAAATCAAGACTCAATAATTTTTTTCTCTTCATGTATTGGTA
GATATCTAAACGTACATAACAAAAAAAGAAAAAAGTAACTTGGGGTTAAAGAATAATTGA
CTTTGGGCGAATAGCAGAGCTGTCATTACTGCTGATGCTTTTTTCTTATTTTCGGAGAAA
AAGAAAGCCCTGTAGGGGGCTCGAACCCCTAACCTTATGATTAAGAGTCATACGCGCTAC
CGATTGCGCCAACAAGGCTTTTTTCTTGGGAAAATCTCTTCCAAGGTTTAACCTA

>SACE0E01650g.cds
ATGTACAACATTCCAGATAATGTCAAAGGGGCTGTAGAATTTGATCCATGGTTGAAACCG
TTTGCCGATGTACTTTCTGAAAGAAGATACCTAGCTGACAAGTGGTTGTACGACATAACT
CATGCTACGCCTGATGGTTCGTATCAGTCACTCAGTAAGTTTGCTAGAGATTCATACAAG
TCATATGGGTTGCATGCCAATCCGGAAACCAAAGAAATCACTTACAAAGAGTGGGCACCC
AATGCGGAACGTGCATTTCTAGTGGGAGATTTCAATAACTGGGATACCACATCTCATGAG
CTCAAGAACAAGGACGAATTTGGAAATTTTACAATCACACTTCATCCTTTACCTAACGGC
GATTTCGCCATCCCTCATGATTCGAAGATTAAAGTCATGTTTATTTTGCCAGATGGTTCC
AAGATCTTTCGTTTACCTGCGTGGATCACAAGGGCTACACAGCCTTCTAAGGAAACTTCT
AAACAGTTCGGGCCCGCATATGAAGGTAGGTTTTGGAATCCAGAGAACCCCTACAAATTT
GTACATCCAAGGCCAAAGTTTAGTGAATCTGTAGATTCCTTAAGGATTTATGAAGCCCAC
GTCGGTATTTCGAGTCCAGAACCAAAGATAACCACATATAAAGAATTTACTGAGAAGGTC
TTACCCAGAATCAAATATCTTGGCTACGATGCAATTCAATTAATGGCTATTATGGAACAT
GCTTATTATGCATCATTTGGCTACCAAGTGACCAATTTTTTTGCGGCGAGCTCCCGTTTC
GGCACCCCTGAGGAATTAAAGGAGCTGATTGATACTGCACATTCTATGGGCATCCTAGTT
TTATTGGATGTAGTTCATAGCCATGCTTCTAAAAACGTCGAGGATGGGTTGAACATGTTT
GACGGTTCTGATCATCAGTATTTCCATTCTATAAGCTCCGGTAGGGGTGAGCATCCGCTG
TGGGATTCCCGTCTTTTTAATTACGGAAAATTTGAAGTGCAGCGATTCTTATTAGCAAAC
CTGGCATTTTATGTTGACGTTTATCAGTTTGATGGGTTTAGATTCGATGGTGTCACATCA
ATGTTATACGTTCATCATGGTGTTGGTGCCGGTGGGTCTTTTAGCGGTGACTATAACGAA
TATCTTTCTCGTGACAGGTCCTTCGTCGATCATGAAGCCTTAGCTTATTTAATGTTAGCC
AATGATTTGGTTCACGAAATGTTGCCAAATCTGGCTGTAACTGTTGCAGAAGATGTCTCT
GGTTATCCAACTTTATGTTTACCCCGCTCCATAGGTGGTACTGGTTTCGACTACAGATTA
GCAATGGCTTTGCCTGATATGTGGATCAAACTAATCAAGGAGAAGAAAGATGATGAATGG
GAGATGGGAAGTATTGTATACACTTTAACTAATAGACGATATGGTGAAAAAGTGGTTGCT
TATTGTGAGTCGCACGACCAAGCTTTAGTTGGTGATAAGACATTAGCGTTTTGGTTGATG
GATGCCGCTATGTACACCGATATGACTGTATTGAAGGAACCATCCATCGTTATTGACCGT
GGTATTGCTCTACACAAGATGATTAGGCTGATCACTCACTCGCTGGGAGGCGAGGCTTAT
TTGAACTTCGAAGGTAATGAGTTCGGTCATCCAGAATGGTTGGATTTCCCTAATGTTAAC
AATGGCGATAGCTACAAGTATGCTCGTAGGCAGTTTAATTTGGCTGATGATCCCTTACTG
CGTTACCAGAATTTAAATGAGTTTGATAGATCAATGCAATTATGTGAGAAAAGGCATAAG
TGGCTGAACACGAAACAGGCTTATGTTTCATTAAAACATGAAGGTGACAAAATGATTGTG
TTTGAAAGAAATAATCTGTTGTTTATTTTCAACTTCCATCCTACAAACAGCTACAGCGAT
TATAGAGTTGGTGTCGAAAAAGCTGGTACTTATCACATCGTGTTGAACTCAGATCGTGCT
GAATTTGGTGGACATAACAGAATCAACGAAAGTTCCGAATTCTTTACCACCGATTTGGAA
TGGAACAACAGGAAGAACTTCCTCCAAGTTTATATTCCTAGTAGAGTCGCTTTGGTGCTT
GCCTTAAAAGAATGA

>SACE0E01650g.aa
MYNIPDNVKGAVEFDPWLKPFADVLSERRYLADKWLYDITHATPDGSYQSLSKFARDSYK
SYGLHANPETKEITYKEWAPNAERAFLVGDFNNWDTTSHELKNKDEFGNFTITLHPLPNG
DFAIPHDSKIKVMFILPDGSKIFRLPAWITRATQPSKETSKQFGPAYEGRFWNPENPYKF
VHPRPKFSESVDSLRIYEAHVGISSPEPKITTYKEFTEKVLPRIKYLGYDAIQLMAIMEH
AYYASFGYQVTNFFAASSRFGTPEELKELIDTAHSMGILVLLDVVHSHASKNVEDGLNMF
DGSDHQYFHSISSGRGEHPLWDSRLFNYGKFEVQRFLLANLAFYVDVYQFDGFRFDGVTS
MLYVHHGVGAGGSFSGDYNEYLSRDRSFVDHEALAYLMLANDLVHEMLPNLAVTVAEDVS
GYPTLCLPRSIGGTGFDYRLAMALPDMWIKLIKEKKDDEWEMGSIVYTLTNRRYGEKVVA
YCESHDQALVGDKTLAFWLMDAAMYTDMTVLKEPSIVIDRGIALHKMIRLITHSLGGEAY
LNFEGNEFGHPEWLDFPNVNNGDSYKYARRQFNLADDPLLRYQNLNEFDRSMQLCEKRHK
WLNTKQAYVSLKHEGDKMIVFERNNLLFIFNFHPTNSYSDYRVGVEKAGTYHIVLNSDRA
EFGGHNRINESSEFFTTDLEWNNRKNFLQVYIPSRVALVLALKE*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

SACE0E01650g

SACE0E01650g

Genomic environment map

Computed results

Homologs and Orthologs

Protein SACE0E01650p

Protein domain map

Computed results for SACE0E01650p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes