HomePISO0N08219g
weakly similar to uniprot|P33310 Saccharomyces cerevisiae SACE0L11945g MDL1_YEAST MDL1 YLR188W Mitochondrial inner membrane half-type ATP- binding cassette (ABC) transporter mediates export of peptides generated upon proteolysis of mitochondrial proteins plays a role in the regulation of cellular resistance to oxidative stress
Element type: CDS
Element length: 2076 nucleotides,
on sense strand of
Piso0N: 675976..678051.
Other names:
GNLVRS01_PISO0N08219g
vPISO-ORF20145
Coding sequence: 692 codons.
Element length: 2076 nucleotides,
on sense strand of
Piso0N: 675976..678051.
Other names:
GNLVRS01_PISO0N08219g
vPISO-ORF20145
Coding sequence: 692 codons.
Allele data
Allele name: Piso0_005119-2Homologs and Orthologs
Homologs in protein family: GL3C0060Orthologs: strict determination not possible; homologs must be refined manually
Protein PISO0N08219p 
Protein domain map
Database cross references:
Computed results for PISO0N08219p
None available yet
Gene Ontology terms
None available yet
Sequence data
>PISO0N08219g.nt ATGCTTACTCCAATACGGACATTACGTACTTTGGGGTTCCGACAAGGAACATTGTCTCCA TTCAGACAGCTTTCTAGTATAGCGACGCCACCAAAAAAAATAGTTATTCCTCAAAATTGC ATTTCAATATTACGACCCTCGTTTAGAACCAAGACACAATTACAATGGATCCCAGTGAAA TACAAGTCTAGCACATCACAGTCTAAAATAGGCACACAGCATAATCGTTCTACTTTTAAT CCGAAGACTCCCAATCCCAGTCTCGGAGTTGGTCTCTCGCGGTTAATAAAGCTTGTGAAG CCTGAGTCAAAGCTACTTGTAGGGGCATTGATCTGTCTTCTAATAACATCTTCAGTTACG ATGATGCTACCGTTGATAATTGGCAAAATAGTTGACACTGCAAGCTCTTCAAAGAGTGCT GAGTCTGAAGAGGGTTCGGAGAAGAAAGCCGAATTCAATAAAATCTGGGGATTCGATCCA GTACAATTTTATACGGGTGTAACATTGGTCTTTTTGACTGGTGCTATATCGAACTTTGGA AGAATTTACTTGCTTCGTTCTGTTGGTGAACGTTTAGTTGCTCGTTTGAGGTCTCGACTA TACCTGAAGATACTCTCTCAGGATAGTTATTTTTTTGATGTAGGGCCAACTAAAAATGGC ATGAAAATTGGTGACTTACTTTCAAGACTAGCAAGCGACACTCAAATAATATCACGTACA CTTAGTGGAAATATTTCTGATGGAGCAAGGGCTGCAATTAGCGGATGTGTTGGTGTATCT ATGATGTGTTACGTGCTGTGGAAGCTCACTCTTTGTATGAGCATGATATTCCCACCCTTG ATCGTAATGTCCCTCTTTTATGGTAGGAGGATCAAGCAGCTTTCTCGTTCAATTCAAGAG CATATAGGTTCCATGTCCAAAGTTGCAGAAGAAAAGCTAAATGGAATTAAGACTATTCAA AGTTTTGGGCAACAGAGACTAGTCGTAAGCGAGTATAATAATGAGATCAGGAATTTGTTC AGAACATCAATGTATGAAGGGAAATTAAGTGGTATTTTCTACGGAGGAAATAGTTTTATC GGAAACATGACTATTGTGGGACTCCTTTTAGTCGGTACTAATTTGATTTCCAAAGGTCAA TTAACTATTGGAGATTTGTCGAGTTTTATGTTGTATGCGACTTTCACTGGTAGCTCAGTA TTTGGTCTCGGAAATTTCTACACGGAGTTAATGAAGGGAATAGGTGCAGCTGAAAGAATT TTCGAGCTTAGTGATCTGGAAAACAGAATTACTACAACCCTAGGCAAAAAGGTGGATAGT ACCCATGGAGCTATTAAGTTTGAGAATGTTGACTTTCGTTACCCTTCTAGGCCGCAAACG CAGATCTTTCAAGACCTTAATCTTACCATAAATAAGGGCGAAAATGTGTGTTTCGTGGGA CCCTCGGGCAGTGGCAAGTCTACAATTTCACAGCTTCTCCTACGCTTCTATGATCCGATT AATGGGAAAGTCACCTTTAATTCGCATGACATCCGAGATCTAAACTTGAATTTTCACAGA TCTAAATTAGGTTATGTTCCCCAAGATCCCCAGCTCTTTACCGGAACAATAAGAGACAAT ATTGTGTTTGGAAAATCCGATTACACCGAGGAAGAGTTACAGCGCGCCATTGAGCTAAGC AATTCTGCTGATTTTATCAACTCTTTCCCTCAGAAATTAGACACGCCCCTCGGTTCTAGC GCCGGTGGTGCGCAGTTAAGTGGCGGTCAGCGACAGAGAGTCGCACTCGCACGAGCACTC ATACGAAACCCCGATATTCTCATACTTGACGAAGCCACCTCGGCTTTAGACTCCTACCTG GAAAAGGTAGTTATGTCCAACCTAAAAATTCTTTCTCGTGAAAAAGAATGCACCATCATC TCTATCGCTCACAGACTCTCAACGATAAGAAATAGCTCCAGAATCATAGTCTTCAATGAT CAAGGACATGTTGTTGAGGACGGTTCCTTTGCTGTTTTAATAGCAAACCCGGCTAGTGAA CTCAACAAATTGTTGAAAAGTCATGATCTTATGTAG
>PISO0N08219g.cds ATGCTTACTCCAATACGGACATTACGTACTTTGGGGTTCCGACAAGGAACATTGTCTCCA TTCAGACAGCTTTCTAGTATAGCGACGCCACCAAAAAAAATAGTTATTCCTCAAAATTGC ATTTCAATATTACGACCCTCGTTTAGAACCAAGACACAATTACAATGGATCCCAGTGAAA TACAAGTCTAGCACATCACAGTCTAAAATAGGCACACAGCATAATCGTTCTACTTTTAAT CCGAAGACTCCCAATCCCAGTCTCGGAGTTGGTCTCTCGCGGTTAATAAAGCTTGTGAAG CCTGAGTCAAAGCTACTTGTAGGGGCATTGATCTGTCTTCTAATAACATCTTCAGTTACG ATGATGCTACCGTTGATAATTGGCAAAATAGTTGACACTGCAAGCTCTTCAAAGAGTGCT GAGTCTGAAGAGGGTTCGGAGAAGAAAGCCGAATTCAATAAAATCTGGGGATTCGATCCA GTACAATTTTATACGGGTGTAACATTGGTCTTTTTGACTGGTGCTATATCGAACTTTGGA AGAATTTACTTGCTTCGTTCTGTTGGTGAACGTTTAGTTGCTCGTTTGAGGTCTCGACTA TACCTGAAGATACTCTCTCAGGATAGTTATTTTTTTGATGTAGGGCCAACTAAAAATGGC ATGAAAATTGGTGACTTACTTTCAAGACTAGCAAGCGACACTCAAATAATATCACGTACA CTTAGTGGAAATATTTCTGATGGAGCAAGGGCTGCAATTAGCGGATGTGTTGGTGTATCT ATGATGTGTTACGTGCTGTGGAAGCTCACTCTTTGTATGAGCATGATATTCCCACCCTTG ATCGTAATGTCCCTCTTTTATGGTAGGAGGATCAAGCAGCTTTCTCGTTCAATTCAAGAG CATATAGGTTCCATGTCCAAAGTTGCAGAAGAAAAGCTAAATGGAATTAAGACTATTCAA AGTTTTGGGCAACAGAGACTAGTCGTAAGCGAGTATAATAATGAGATCAGGAATTTGTTC AGAACATCAATGTATGAAGGGAAATTAAGTGGTATTTTCTACGGAGGAAATAGTTTTATC GGAAACATGACTATTGTGGGACTCCTTTTAGTCGGTACTAATTTGATTTCCAAAGGTCAA TTAACTATTGGAGATTTGTCGAGTTTTATGTTGTATGCGACTTTCACTGGTAGCTCAGTA TTTGGTCTCGGAAATTTCTACACGGAGTTAATGAAGGGAATAGGTGCAGCTGAAAGAATT TTCGAGCTTAGTGATCTGGAAAACAGAATTACTACAACCCTAGGCAAAAAGGTGGATAGT ACCCATGGAGCTATTAAGTTTGAGAATGTTGACTTTCGTTACCCTTCTAGGCCGCAAACG CAGATCTTTCAAGACCTTAATCTTACCATAAATAAGGGCGAAAATGTGTGTTTCGTGGGA CCCTCGGGCAGTGGCAAGTCTACAATTTCACAGCTTCTCCTACGCTTCTATGATCCGATT AATGGGAAAGTCACCTTTAATTCGCATGACATCCGAGATCTAAACTTGAATTTTCACAGA TCTAAATTAGGTTATGTTCCCCAAGATCCCCAGCTCTTTACCGGAACAATAAGAGACAAT ATTGTGTTTGGAAAATCCGATTACACCGAGGAAGAGTTACAGCGCGCCATTGAGCTAAGC AATTCTGCTGATTTTATCAACTCTTTCCCTCAGAAATTAGACACGCCCCTCGGTTCTAGC GCCGGTGGTGCGCAGTTAAGTGGCGGTCAGCGACAGAGAGTCGCACTCGCACGAGCACTC ATACGAAACCCCGATATTCTCATACTTGACGAAGCCACCTCGGCTTTAGACTCCTACCTG GAAAAGGTAGTTATGTCCAACCTAAAAATTCTTTCTCGTGAAAAAGAATGCACCATCATC TCTATCGCTCACAGACTCTCAACGATAAGAAATAGCTCCAGAATCATAGTCTTCAATGAT CAAGGACATGTTGTTGAGGACGGTTCCTTTGCTGTTTTAATAGCAAACCCGGCTAGTGAA CTCAACAAATTGTTGAAAAGTCATGATCTTATGTAG
>PISO0N08219g.aa MLTPIRTLRTLGFRQGTLSPFRQLSSIATPPKKIVIPQNCISILRPSFRTKTQLQWIPVK YKSSTSQSKIGTQHNRSTFNPKTPNPSLGVGLSRLIKLVKPESKLLVGALICLLITSSVT MMLPLIIGKIVDTASSSKSAESEEGSEKKAEFNKIWGFDPVQFYTGVTLVFLTGAISNFG RIYLLRSVGERLVARLRSRLYLKILSQDSYFFDVGPTKNGMKIGDLLSRLASDTQIISRT LSGNISDGARAAISGCVGVSMMCYVLWKLTLCMSMIFPPLIVMSLFYGRRIKQLSRSIQE HIGSMSKVAEEKLNGIKTIQSFGQQRLVVSEYNNEIRNLFRTSMYEGKLSGIFYGGNSFI GNMTIVGLLLVGTNLISKGQLTIGDLSSFMLYATFTGSSVFGLGNFYTELMKGIGAAERI FELSDLENRITTTLGKKVDSTHGAIKFENVDFRYPSRPQTQIFQDLNLTINKGENVCFVG PSGSGKSTISQLLLRFYDPINGKVTFNSHDIRDLNLNFHRSKLGYVPQDPQLFTGTIRDN IVFGKSDYTEEELQRAIELSNSADFINSFPQKLDTPLGSSAGGAQLSGGQRQRVALARAL IRNPDILILDEATSALDSYLEKVVMSNLKILSREKECTIISIAHRLSTIRNSSRIIVFND QGHVVEDGSFAVLIANPASELNKLLKSHDLM*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://192.168.122.177/elt/PISO/PISO0N08219g