HomePISO0N00321g
weakly similar to uniprot|P23202 Saccharomyces cerevisiae SACE0N02420g URE2_YEAST URE2 [URE3] YNL229C Nitrogen catabolite repression transcriptional regulator that acts by inhibition of GLN3 transcription in good nitrogen source
Element type: CDS
Element length: 639 nucleotides,
on anti-sense strand of
Piso0N: complement(24455..25093).
Other names:
GNLVRS01_PISO0N00321g
vPISO-ORF22390
Coding sequence: 213 codons.
Element length: 639 nucleotides,
on anti-sense strand of
Piso0N: complement(24455..25093).
Other names:
GNLVRS01_PISO0N00321g
vPISO-ORF22390
Coding sequence: 213 codons.
Allele data
Allele name: Piso0_004750-2Homologs and Orthologs
Homologs in protein family: GL3C0580Orthologs: strict determination not possible; homologs must be refined manually
Protein PISO0N00321p 
weakly similar to uniprot|P23202 Saccharomyces cerevisiae SACE0N02420g URE2_YEAST URE2 [URE3] YNL229C Nitrogen catabolite repression transcriptional regulator that acts by inhibition of GLN3 transcription in good nitrogen source;
Protein domain map
Database cross references:
Computed results for PISO0N00321p
None available yet
Gene Ontology terms
None available yet
Sequence data
>PISO0N00321g.nt ATGTCGGGATTGACGCTTTACACATGGAAGACACCTAATGGATATAAGATATCGATATTT CTTGAGTTGCTAGGACTTAAATATGATACCAAGAGCATCGATATCTCTAAAAATACCCAA AAAGAAGATTGGTTTCTTAAATTGAACCCCAATGGAAGGATTCCCACATTGGTAGACGAC TCTACTGGTATTACTATTAGCGAAACAGGAGCGATATTGCAGTATTTAGCAGATTTCTAT GATAAAGAACATCGCTTCTCTTATCCTAAGGGCACCAAGGAGTACTATTTACAGTTGGAA ACTTTATACTTTCAAATGGCCGGAGTTGGCCCTATGCAAGGACAGGCTAACCACTTTATT ATATATGCACCTGAAAAGATTCCTTATGGTGTTACCAGATACATCAATGAAACCAAACGC TTGTACTCTGTCGTGGAAGAGTATTTGCGCCGTAATCAGCATAATGGCCCATATCTTGTT GGAAATCATTATTGCATATCCGATATTGCTTTGGTAGGCTGGGCAAATTACCTTGATAAA TTGGAAATTGACATGAAGCAATGGCCTTTGGTTACCCAATGGTTTGAAAAGTTGAAATCT TTACCAGAAGTACAGAAAGGTTTTTCTGTGCCATCATAA
>PISO0N00321g.cds ATGTCGGGATTGACGCTTTACACATGGAAGACACCTAATGGATATAAGATATCGATATTT CTTGAGTTGCTAGGACTTAAATATGATACCAAGAGCATCGATATCTCTAAAAATACCCAA AAAGAAGATTGGTTTCTTAAATTGAACCCCAATGGAAGGATTCCCACATTGGTAGACGAC TCTACTGGTATTACTATTAGCGAAACAGGAGCGATATTGCAGTATTTAGCAGATTTCTAT GATAAAGAACATCGCTTCTCTTATCCTAAGGGCACCAAGGAGTACTATTTACAGTTGGAA ACTTTATACTTTCAAATGGCCGGAGTTGGCCCTATGCAAGGACAGGCTAACCACTTTATT ATATATGCACCTGAAAAGATTCCTTATGGTGTTACCAGATACATCAATGAAACCAAACGC TTGTACTCTGTCGTGGAAGAGTATTTGCGCCGTAATCAGCATAATGGCCCATATCTTGTT GGAAATCATTATTGCATATCCGATATTGCTTTGGTAGGCTGGGCAAATTACCTTGATAAA TTGGAAATTGACATGAAGCAATGGCCTTTGGTTACCCAATGGTTTGAAAAGTTGAAATCT TTACCAGAAGTACAGAAAGGTTTTTCTGTGCCATCATAA
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://192.168.122.177/elt/PISO/PISO0N00321g